| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yheI [H]
Identifier: 62390316
GI number: 62390316
Start: 1510280
End: 1511836
Strand: Direct
Name: yheI [H]
Synonym: cg1621
Alternate gene names: 62390316
Gene position: 1510280-1511836 (Clockwise)
Preceding gene: 62390312
Following gene: 62390317
Centisome position: 46.01
GC content: 54.98
Gene sequence:
>1557_bases GTGCAACAAACGAAATCCACACCTTTAGATAGGTATAAAAACCTCCCCGGGCCCGGCGCGCGACCGTCCAAGATGCCGGC GTTGGATGCCAAATTATGGACTCTCAAAGTGGCGTTGTCGCAGCGGCCGTGGAGCTTTGTGGCGTCTGCTGGCATGGCGG CGTCTTTTATCTGCAATGGGTTAACGCCTGTGATTGTGGGTAAGGCGGTGGATGAGGCTATTGGCACGAGCGATCTGCAG CGATTGTGGTTCTGGATTGCCATGTTGGCGGTTCTTTTCTTAACGGCGATGACGGTGAACTGGATTGCTCGGTACATGTT GGTGCGGAGCCAGCAGTTGGTCAGCCATGATTTGCGCATGTTGGTGACTGATCGGATTCAAGATCCGCGTGGTTTTGCTG GAAAAGAGCGCACTGCGGGTGGATTGTTGTCGATTGCGTCATCGGATACGCAGCGGGTGGGCGATATCGTCATGATGACG GTGTTCCCGGTGGCGGAATTGGCGTCGATTATTTATGGCGCCGTGGTGATGTACAGCATTAATCCGTGGTTGAGTGTGGC TGTGCTGATTGGTGGACCGCTGCTGGTTGTGGTGGCTATTCAGGTCTCAAAGCCGTTGCAGAAGCGTTCGGGTGCTCGTC AGCAGGCGGTGGCACAGGCTGCGGCTACTGCAACTGATGTGGTGCAGGGCTTGAGAATTTTGAAGGGTTTGGGCGCGATT GTCACGGTGCGCCGTCGGTACGAGGCGATTTCTGGTGAGGCTTATCGGAAGACGGTTCATGCGGATGCTGCGGAAGCTCG CTTGAATGGTGTCACCGATGCGGCGGGCGCCATCTTTGTGTCCGCGTTGGGTATTGGAGCAGGATTTTTGGCGCTGCAAG GTCAGATGAGTATTGGTGATTTGATCACGGTTGTGGGACTCACACAGTTTTTGATCATGCCGATGACCATGCTTGGTCGA AATGTGGCATCGCGCTGGGCATCGGCGGAGGCGTCGGCAAAGCGTATTAGGGGAGTGCTCGGTGCTGATTTTGAGAGAGT GTCTGCGCATGATGCGGACAAGGCTGAGGAGATTATCCAACAACTTGCCAAAGGTTTGACGGTTATTCGAGGCACTGATG AGCAGCTCGTTGAGGTATTAGAGCAGTTGCCACGTACTCGGGTGATTGTGGCTCCTCATGCGGCGGATCTTTTTGATCAA AGTGTCAGGGACAATGTGCATCCCGTGGCAGAGGTCGCGGAGAAAGCCATTGAAGTTGCCTCCTGTGACGATATTCCAGG TGGTAGTTCCAAGATTGTGGGCGAGGGTGGACGGTTGCTCTCGGGTGGTCAGCGTCAGCGCGTTGCACTGGCTCGGGCGA TTGCTTTTGATCCAGAGGTGTTGGTGCTTCAAGATCCCACAACGGCAGTGGATTCTGTGACGGAGCAAAACATTGCTCAG CAAGTGGCAGCACACCGTGCAGGAAAAGTGACCATTGTGTTTAGTGAGGCACCCGCGTGGAGTGCGGTGGCTGATCAACA CGTTGAGGCAGCTGCTTTGCGGGAGGTTATGAAATGA
Upstream 100 bases:
>100_bases TGAGCTGGATCATTCATATCAGATGTTAATCCTAGCGGGCTACCACCACCTTCACTAGCGATATATCGCTTAACGTGCTC ATGAGATACAGTATCTCCTT
Downstream 100 bases:
>100_bases GTGGGGAGACGTCGAAAAGCATGCGCTTTCCGTTGGCCAGCCTGCCGCAAGTGCGGCGCGAGGTGGCCCGGCAGGTGGGT CGTATTCCGCGGGCGAAGTG
Product: ABC-type multidrug/protein/lipid transport system, ATPase component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MQQTKSTPLDRYKNLPGPGARPSKMPALDAKLWTLKVALSQRPWSFVASAGMAASFICNGLTPVIVGKAVDEAIGTSDLQ RLWFWIAMLAVLFLTAMTVNWIARYMLVRSQQLVSHDLRMLVTDRIQDPRGFAGKERTAGGLLSIASSDTQRVGDIVMMT VFPVAELASIIYGAVVMYSINPWLSVAVLIGGPLLVVVAIQVSKPLQKRSGARQQAVAQAAATATDVVQGLRILKGLGAI VTVRRRYEAISGEAYRKTVHADAAEARLNGVTDAAGAIFVSALGIGAGFLALQGQMSIGDLITVVGLTQFLIMPMTMLGR NVASRWASAEASAKRIRGVLGADFERVSAHDADKAEEIIQQLAKGLTVIRGTDEQLVEVLEQLPRTRVIVAPHAADLFDQ SVRDNVHPVAEVAEKAIEVASCDDIPGGSSKIVGEGGRLLSGGQRQRVALARAIAFDPEVLVLQDPTTAVDSVTEQNIAQ QVAAHRAGKVTIVFSEAPAWSAVADQHVEAAALREVMK
Sequences:
>Translated_518_residues MQQTKSTPLDRYKNLPGPGARPSKMPALDAKLWTLKVALSQRPWSFVASAGMAASFICNGLTPVIVGKAVDEAIGTSDLQ RLWFWIAMLAVLFLTAMTVNWIARYMLVRSQQLVSHDLRMLVTDRIQDPRGFAGKERTAGGLLSIASSDTQRVGDIVMMT VFPVAELASIIYGAVVMYSINPWLSVAVLIGGPLLVVVAIQVSKPLQKRSGARQQAVAQAAATATDVVQGLRILKGLGAI VTVRRRYEAISGEAYRKTVHADAAEARLNGVTDAAGAIFVSALGIGAGFLALQGQMSIGDLITVVGLTQFLIMPMTMLGR NVASRWASAEASAKRIRGVLGADFERVSAHDADKAEEIIQQLAKGLTVIRGTDEQLVEVLEQLPRTRVIVAPHAADLFDQ SVRDNVHPVAEVAEKAIEVASCDDIPGGSSKIVGEGGRLLSGGQRQRVALARAIAFDPEVLVLQDPTTAVDSVTEQNIAQ QVAAHRAGKVTIVFSEAPAWSAVADQHVEAAALREVMK >Mature_518_residues MQQTKSTPLDRYKNLPGPGARPSKMPALDAKLWTLKVALSQRPWSFVASAGMAASFICNGLTPVIVGKAVDEAIGTSDLQ RLWFWIAMLAVLFLTAMTVNWIARYMLVRSQQLVSHDLRMLVTDRIQDPRGFAGKERTAGGLLSIASSDTQRVGDIVMMT VFPVAELASIIYGAVVMYSINPWLSVAVLIGGPLLVVVAIQVSKPLQKRSGARQQAVAQAAATATDVVQGLRILKGLGAI VTVRRRYEAISGEAYRKTVHADAAEARLNGVTDAAGAIFVSALGIGAGFLALQGQMSIGDLITVVGLTQFLIMPMTMLGR NVASRWASAEASAKRIRGVLGADFERVSAHDADKAEEIIQQLAKGLTVIRGTDEQLVEVLEQLPRTRVIVAPHAADLFDQ SVRDNVHPVAEVAEKAIEVASCDDIPGGSSKIVGEGGRLLSGGQRQRVALARAIAFDPEVLVLQDPTTAVDSVTEQNIAQ QVAAHRAGKVTIVFSEAPAWSAVADQHVEAAALREVMK
Specific function: Involved in the transport of four structurally unrelated drugs, including doxorubicin and mitoxantrone. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1786653, Length=504, Percent_Identity=22.0238095238095, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1787143, Length=525, Percent_Identity=20.5714285714286, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193202349, Length=139, Percent_Identity=32.3741007194245, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17567269, Length=122, Percent_Identity=32.7868852459016, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17541710, Length=139, Percent_Identity=30.2158273381295, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17558664, Length=117, Percent_Identity=35.8974358974359, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI115535101, Length=118, Percent_Identity=33.8983050847458, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17569145, Length=133, Percent_Identity=27.0676691729323, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17567265, Length=117, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17569143, Length=121, Percent_Identity=31.404958677686, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=98, Percent_Identity=34.6938775510204, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357851, Length=151, Percent_Identity=35.0993377483444, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI45551501, Length=151, Percent_Identity=35.0993377483444, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI45551502, Length=151, Percent_Identity=35.0993377483444, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI23397593, Length=97, Percent_Identity=39.1752577319588, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI85726357, Length=118, Percent_Identity=35.5932203389831, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 55288; Mature: 55288
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQTKSTPLDRYKNLPGPGARPSKMPALDAKLWTLKVALSQRPWSFVASAGMAASFICNG CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHHCC LTPVIVGKAVDEAIGTSDLQRLWFWIAMLAVLFLTAMTVNWIARYMLVRSQQLVSHDLRM CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTDRIQDPRGFAGKERTAGGLLSIASSDTQRVGDIVMMTVFPVAELASIIYGAVVMYSI HHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPWLSVAVLIGGPLLVVVAIQVSKPLQKRSGARQQAVAQAAATATDVVQGLRILKGLGAI CHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTVRRRYEAISGEAYRKTVHADAAEARLNGVTDAAGAIFVSALGIGAGFLALQGQMSIGD HHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCHHHHHEECCCCHHH LITVVGLTQFLIMPMTMLGRNVASRWASAEASAKRIRGVLGADFERVSAHDADKAEEIIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH QLAKGLTVIRGTDEQLVEVLEQLPRTRVIVAPHAADLFDQSVRDNVHPVAEVAEKAIEVA HHHCCCEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH SCDDIPGGSSKIVGEGGRLLSGGQRQRVALARAIAFDPEVLVLQDPTTAVDSVTEQNIAQ CCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH QVAAHRAGKVTIVFSEAPAWSAVADQHVEAAALREVMK HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MQQTKSTPLDRYKNLPGPGARPSKMPALDAKLWTLKVALSQRPWSFVASAGMAASFICNG CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHHCC LTPVIVGKAVDEAIGTSDLQRLWFWIAMLAVLFLTAMTVNWIARYMLVRSQQLVSHDLRM CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTDRIQDPRGFAGKERTAGGLLSIASSDTQRVGDIVMMTVFPVAELASIIYGAVVMYSI HHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPWLSVAVLIGGPLLVVVAIQVSKPLQKRSGARQQAVAQAAATATDVVQGLRILKGLGAI CHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTVRRRYEAISGEAYRKTVHADAAEARLNGVTDAAGAIFVSALGIGAGFLALQGQMSIGD HHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCHHHHHEECCCCHHH LITVVGLTQFLIMPMTMLGRNVASRWASAEASAKRIRGVLGADFERVSAHDADKAEEIIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH QLAKGLTVIRGTDEQLVEVLEQLPRTRVIVAPHAADLFDQSVRDNVHPVAEVAEKAIEVA HHHCCCEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH SCDDIPGGSSKIVGEGGRLLSGGQRQRVALARAIAFDPEVLVLQDPTTAVDSVTEQNIAQ CCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH QVAAHRAGKVTIVFSEAPAWSAVADQHVEAAALREVMK HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]