| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is uspA1
Identifier: 62390255
GI number: 62390255
Start: 1437802
End: 1438245
Strand: Direct
Name: uspA1
Synonym: cg1551
Alternate gene names: NA
Gene position: 1437802-1438245 (Clockwise)
Preceding gene: 62390254
Following gene: 62390257
Centisome position: 43.8
GC content: 51.35
Gene sequence:
>444_bases ATGAGCGAGAATTACAGCAAGATTGTCGTTGGCACTGATGGATCTAAGTCGTCCCTTCTAGCAGTTGAACGAGCTGCCCG AATCGCCGCAGCTTTCGACGCCACTTTGATCATCGGATGTGCATACTACGAAAGCAAGGAAGACGCTTCAGAGACTTTGC GCCAGGATTCTGTAACAATCCTCGGCGATGATCCTGCTCGTGAAAACCTGGACAAGGCAGCAGATGCAGCACGCGCTGTC GGCGCAACCTCCATCGAGACTGAGGTTCGTACTGGCACTCCAGTTGAGGCTTTGATGGCAATCGTTAATGATCACCAAGC TGACCTTCTTGTGGTTGGTAACCGTGGAATCAACTCTTTGACCGGCCGTTTGTTGGGTTCAGTTCCAGCTGATGTTGCAC GCCAATCAGACTGCGATGTCATGATTGTTCACACCGTGAGCTAA
Upstream 100 bases:
>100_bases AGCCCTTAAACTCTCATTCTTTTGTTAGACTTGTTCACTAATTACAGACATCCAGGGGCTTAGATTTTTAACCCCTGTCA TAAGTTTTTGGGAAGGTCAC
Downstream 100 bases:
>100_bases AAAAACCAAACCAAAACCGGTGTTTCCCTCCTTTTGCATTGAGGGGAACACCGGTTTTGTGTTTCTCGAGGAAAGTGCTC GGGAGTGTTAGTGCTGCTTA
Product: universal stress protein UspA-like nucleotide-binding protein
Products: NA
Alternate protein names: USP Rv1636 [H]
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSENYSKIVVGTDGSKSSLLAVERAARIAAAFDATLIIGCAYYESKEDASETLRQDSVTILGDDPARENLDKAADAARAV GATSIETEVRTGTPVEALMAIVNDHQADLLVVGNRGINSLTGRLLGSVPADVARQSDCDVMIVHTVS
Sequences:
>Translated_147_residues MSENYSKIVVGTDGSKSSLLAVERAARIAAAFDATLIIGCAYYESKEDASETLRQDSVTILGDDPARENLDKAADAARAV GATSIETEVRTGTPVEALMAIVNDHQADLLVVGNRGINSLTGRLLGSVPADVARQSDCDVMIVHTVS >Mature_146_residues SENYSKIVVGTDGSKSSLLAVERAARIAAAFDATLIIGCAYYESKEDASETLRQDSVTILGDDPARENLDKAADAARAVG ATSIETEVRTGTPVEALMAIVNDHQADLLVVGNRGINSLTGRLLGSVPADVARQSDCDVMIVHTVS
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15421; Mature: 15290
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENYSKIVVGTDGSKSSLLAVERAARIAAAFDATLIIGCAYYESKEDASETLRQDSVTI CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCHHHEEEEHHCCCCHHHHHHHHHCCEEE LGDDPARENLDKAADAARAVGATSIETEVRTGTPVEALMAIVNDHQADLLVVGNRGINSL EECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHH TGRLLGSVPADVARQSDCDVMIVHTVS HHHHHCCCCHHHHCCCCCCEEEEEECC >Mature Secondary Structure SENYSKIVVGTDGSKSSLLAVERAARIAAAFDATLIIGCAYYESKEDASETLRQDSVTI CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCHHHEEEEHHCCCCHHHHHHHHHCCEEE LGDDPARENLDKAADAARAVGATSIETEVRTGTPVEALMAIVNDHQADLLVVGNRGINSL EECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHH TGRLLGSVPADVARQSDCDVMIVHTVS HHHHHCCCCHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]