| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ppx2 [H]
Identifier: 62389868
GI number: 62389868
Start: 1038918
End: 1039883
Strand: Direct
Name: ppx2 [H]
Synonym: cg1115
Alternate gene names: 62389868
Gene position: 1038918-1039883 (Clockwise)
Preceding gene: 62389867
Following gene: 62389870
Centisome position: 31.65
GC content: 54.66
Gene sequence:
>966_bases ATGACCCGTTACGCGGCCATCGATTGCGGAACAAACTCCATCCGCCTCCTGATCACTGAAGTCACTCCTGAGGGATTCAA AGAGATCACCCGTGAAAACACCATCGTTCGCCTGGGCAAAGGCGTCGACGCCACCGGTCAGCTAGACCCCGAGGCAATCG AGCGCACTCGTGTCGCTTTGGAAAACTACGTTGAACTCATGGAAACCCATGGGGTAGAGGCCGTACGAATGGTTGCCACC TCCGCAACCCGCGATGCGTCCAACCGCGATGAATTCTTTTCGATGACCCGCCAGCTTCTGTCCAAGATCCGTCCTGGATA CCAAGCTGAAGTAATTTCCGGCGAAGAGGAAGCTCTGCTGTCCTTCCGAGGTGCAATCGTTGACCTGCCTGAAGACCAAG GTCCTTTCTGTGTTATCGACCTTGGCGGTGGATCCACTGAGTTCATCGTTGGCACCTACGACGGTGAAATCCTAGGCTCC CACTCAACCCAAATGGGATGCGTGCGCCTGACCGAACGAATCATGCGCAGCGACCCACCGACTGAAACCGAAGTGGAAAT CGCCCGCGACTACGTTGCAGAACGCATCCAGGAAGTAAAAGCCATCGTCCCAATTTCAAAGGCAAAAACCTTTGTGGGAT GCGCAGGCACCTTCACCACAATCTCCGCCTGGGTGCAAGGCCTAGAAAGCTACGACCGCGACGCGATCCACCTCTCTGCA CTCAACTTCGATGCACTGCGAGTTGTCACCGATGAGATCATTTCAGAATCATCATCACAGCGCGCCAGCAACCCAGTTGT TGATCCAGGTCGCGCCGACGTCATCGGTGGCGGATCCGTTGTTGTCCAAGCAGCGATCGACTTAGCCTCCAAAGAAGCCG GTGTAGACTACATCATTATTTCCGAAAAAGACATCCTCGACGGCCTCATCCTTGGCCTGGTAGAAGCCGACTCTTTGAAG AAATAG
Upstream 100 bases:
>100_bases GCGACCTCCGCGGTACCGCCATCCCAGAGGACTGGCCAACAGTACAAGACCTGGGCATCAACATGGAGGACTTTGATTTC TCCCGAGCAGGTGGGGCTTA
Downstream 100 bases:
>100_bases GACCCTAGTTTTAAACCACTGGGTCATCATGTTCTATGATGTGTAAGCACCAAGTAAATGGCATTGGAAGCATACATATG TATCCTGACAATGCTGCTTG
Product: exopolyphosphatase
Products: NA
Alternate protein names: 3-dehydroquinate synthase; Unknown phosphatase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTRYAAIDCGTNSIRLLITEVTPEGFKEITRENTIVRLGKGVDATGQLDPEAIERTRVALENYVELMETHGVEAVRMVAT SATRDASNRDEFFSMTRQLLSKIRPGYQAEVISGEEEALLSFRGAIVDLPEDQGPFCVIDLGGGSTEFIVGTYDGEILGS HSTQMGCVRLTERIMRSDPPTETEVEIARDYVAERIQEVKAIVPISKAKTFVGCAGTFTTISAWVQGLESYDRDAIHLSA LNFDALRVVTDEIISESSSQRASNPVVDPGRADVIGGGSVVVQAAIDLASKEAGVDYIIISEKDILDGLILGLVEADSLK K
Sequences:
>Translated_321_residues MTRYAAIDCGTNSIRLLITEVTPEGFKEITRENTIVRLGKGVDATGQLDPEAIERTRVALENYVELMETHGVEAVRMVAT SATRDASNRDEFFSMTRQLLSKIRPGYQAEVISGEEEALLSFRGAIVDLPEDQGPFCVIDLGGGSTEFIVGTYDGEILGS HSTQMGCVRLTERIMRSDPPTETEVEIARDYVAERIQEVKAIVPISKAKTFVGCAGTFTTISAWVQGLESYDRDAIHLSA LNFDALRVVTDEIISESSSQRASNPVVDPGRADVIGGGSVVVQAAIDLASKEAGVDYIIISEKDILDGLILGLVEADSLK K >Mature_320_residues TRYAAIDCGTNSIRLLITEVTPEGFKEITRENTIVRLGKGVDATGQLDPEAIERTRVALENYVELMETHGVEAVRMVATS ATRDASNRDEFFSMTRQLLSKIRPGYQAEVISGEEEALLSFRGAIVDLPEDQGPFCVIDLGGGSTEFIVGTYDGEILGSH STQMGCVRLTERIMRSDPPTETEVEIARDYVAERIQEVKAIVPISKAKTFVGCAGTFTTISAWVQGLESYDRDAIHLSAL NFDALRVVTDEIISESSSQRASNPVVDPGRADVIGGGSVVVQAAIDLASKEAGVDYIIISEKDILDGLILGLVEADSLKK
Specific function: Conversion Of Pppgpp To Ppgpp. Guanosine Pentaphosphate (Pppgpp) Is A Cytoplasmic Signaling Molecule Which Together With Ppgpp Controls The "Stringent Response", An Adaptive Process That Allows Bacteria To Respond To Amino Acid Starvation, Resulting In T
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI48994966, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1788848, Length=214, Percent_Identity=29.9065420560748, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR016037 - InterPro: IPR003695 [H]
Pfam domain/function: PF01761 DHQ_synthase; PF02541 Ppx-GppA [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 34764; Mature: 34632
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYAAIDCGTNSIRLLITEVTPEGFKEITRENTIVRLGKGVDATGQLDPEAIERTRVAL CCEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHH ENYVELMETHGVEAVRMVATSATRDASNRDEFFSMTRQLLSKIRPGYQAEVISGEEEALL HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH SFRGAIVDLPEDQGPFCVIDLGGGSTEFIVGTYDGEILGSHSTQMGCVRLTERIMRSDPP HHCCCEEECCCCCCCEEEEECCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCC TETEVEIARDYVAERIQEVKAIVPISKAKTFVGCAGTFTTISAWVQGLESYDRDAIHLSA CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEE LNFDALRVVTDEIISESSSQRASNPVVDPGRADVIGGGSVVVQAAIDLASKEAGVDYIII ECCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEE SEKDILDGLILGLVEADSLKK CCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRYAAIDCGTNSIRLLITEVTPEGFKEITRENTIVRLGKGVDATGQLDPEAIERTRVAL CEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHH ENYVELMETHGVEAVRMVATSATRDASNRDEFFSMTRQLLSKIRPGYQAEVISGEEEALL HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH SFRGAIVDLPEDQGPFCVIDLGGGSTEFIVGTYDGEILGSHSTQMGCVRLTERIMRSDPP HHCCCEEECCCCCCCEEEEECCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCC TETEVEIARDYVAERIQEVKAIVPISKAKTFVGCAGTFTTISAWVQGLESYDRDAIHLSA CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEE LNFDALRVVTDEIISESSSQRASNPVVDPGRADVIGGGSVVVQAAIDLASKEAGVDYIII ECCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEE SEKDILDGLILGLVEADSLKK CCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]