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The map label for this gene is porB

Identifier: 62389863

GI number: 62389863

Start: 1034736

End: 1035116

Strand: Reverse

Name: porB

Synonym: cg1109

Alternate gene names: NA

Gene position: 1035116-1034736 (Counterclockwise)

Preceding gene: 62389869

Following gene: 62389862

Centisome position: 31.53

GC content: 55.38

Gene sequence:

>381_bases
ATGAAGCTTTCACACCGCATCGCAGCAATGGCAGCAACCGCAGGCATCACAGTGGCAGCATTCGCAGCACCTGCTTCCGC
ATCCGACTTCGCAAACCTATCCTCCACCAACAAAGAACTGTCCCCTCAGTACAACTGGGTTGCTTGCGGCATCCTTGAGG
GTGGCCTCAAAGCAGCTGGCGTCCTTGAAGAAGGCCAGTACAACCGCGAGCTCGCAGAAGCAATCGCCGCAAAGGGTGAA
GGCTTCTGGACCACTCAGTTCCCACAAATCGGTGATTGGAACGAAGATCAGGCAGCAGCACTTGCCGACCGCGCACAAAC
CTGTGGCCTAGTTAAGGCTGACACCTACCTTTCTGAGCTGTCCTCCAACTTCTCTTCCTAA

Upstream 100 bases:

>100_bases
ACTGGTAGAAGCTTTGATGATCTACATCACAAATTTACAATGTGTGGTGAGTTATTCATATTACCCAAGGACTTAAACCT
TAAAAGGAGCCCTAAAAATC

Downstream 100 bases:

>100_bases
AAGGTTCGGGGGTAACCCCAAAAATCACTTAAGTCACAACAGTCACATAAATCACTTCAGTAACGTATGATTTTGGACTG
TTGTGGCTTTTGCCATATTT

Product: anion-specific porin precursor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKLSHRIAAMAATAGITVAAFAAPASASDFANLSSTNKELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGE
GFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTYLSELSSNFSS

Sequences:

>Translated_126_residues
MKLSHRIAAMAATAGITVAAFAAPASASDFANLSSTNKELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGE
GFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTYLSELSSNFSS
>Mature_126_residues
MKLSHRIAAMAATAGITVAAFAAPASASDFANLSSTNKELSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGE
GFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTYLSELSSNFSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13220; Mature: 13220

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSHRIAAMAATAGITVAAFAAPASASDFANLSSTNKELSPQYNWVACGILEGGLKAAG
CCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC
VLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTYLSEL
CCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
SSNFSS
HHHCCC
>Mature Secondary Structure
MKLSHRIAAMAATAGITVAAFAAPASASDFANLSSTNKELSPQYNWVACGILEGGLKAAG
CCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC
VLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAAALADRAQTCGLVKADTYLSEL
CCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
SSNFSS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA