| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is prsA [H]
Identifier: 62389833
GI number: 62389833
Start: 998933
End: 999910
Strand: Reverse
Name: prsA [H]
Synonym: cg1075
Alternate gene names: 62389833
Gene position: 999910-998933 (Counterclockwise)
Preceding gene: 62389834
Following gene: 62389832
Centisome position: 30.46
GC content: 59.51
Gene sequence:
>978_bases ATGACTGCTCACTGGAAACAAAACCAAAAGAACCTCATGCTGTTTTCGGGTCGTGCGCACCCAGAACTGGCAGAAGCTGT AGCTAAAGAGCTCGACGTCAACGTCACCCCAATGACGGCACGCGATTTCGCCAACGGTGAAATCTACGTCCGCTTCGAGG AATCAGTTCGTGGCTCCGACTGCTTCGTCCTGCAGTCCCACACCCAGCCTCTCAACAAGTGGCTCATGGAACAGCTGCTG ATGATCGACGCTTTGAAGCGTGGTTCCGCAAAGCGCATCACCGCGATCCTGCCGTTCTACCCATATGCCCGCCAGGACAA GAAGCACCGCGGCCGCGAGCCAATTTCTGCTCGCCTCATCGCCGACCTCATGCTCACCGCTGGCGCGGACCGTATCGTGT CCGTGGACTTGCACACCGATCAGATCCAGGGCTTCTTCGACGGCCCAGTCGATCACATGCACGCCATGCCGATCCTCACC GATCACATCAAGGAAAACTACAACCTGGACAACATCTGCGTGGTCTCCCCTGACGCAGGTCGCGTGAAGGTTGCAGAGAA GTGGGCTAACACCTTGGGCGATGCCCCAATGGCGTTCGTGCACAAGACCCGCTCCACCGAGGTAGCAAACCAGGTTGTCG CCAACCGCGTCGTCGGTGACGTCGACGGCAAGGACTGCGTGCTTCTCGACGACATGATCGACACTGGCGGCACCATCGCC GGCGCTGTGGGCGTCCTGAAGAAGGCTGGCGCAAAGTCAGTCGTCATCGCCTGCACCCACGGTGTGTTCTCTGACCCAGC CCGCGAGCGCCTGTCTGCATGCGGTGCTGAAGAAGTCATCACCACCGACACCCTGCCACAGTCCACCGAGGGCTGGAGCA ACCTGACCGTTTTGTCGATCGCACCGCTGCTGGCTCGCACCATCAACGAGATCTTCGAAAACGGTTCCGTCACCACCCTC TTCGAGGGCGAGGCCTAA
Upstream 100 bases:
>100_bases TCGAAGGCTGGGTGCAAAAGAAGCGCCCTGGAACCGCTGCAGCACAAGCCGCAGAAGCCGCCCAAAACGTCCACAACCAG GAAGGCTAAGCAGGATCCTC
Downstream 100 bases:
>100_bases ACACCCATGCCCACCACGGACGTCTTCAACCGCGTCCGGTTGGCATTGGAACCTCTAGCTGATCCCGCACGTGCCACCGG AATGGCAAGCTACATGCGGG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTAHWKQNQKNLMLFSGRAHPELAEAVAKELDVNVTPMTARDFANGEIYVRFEESVRGSDCFVLQSHTQPLNKWLMEQLL MIDALKRGSAKRITAILPFYPYARQDKKHRGREPISARLIADLMLTAGADRIVSVDLHTDQIQGFFDGPVDHMHAMPILT DHIKENYNLDNICVVSPDAGRVKVAEKWANTLGDAPMAFVHKTRSTEVANQVVANRVVGDVDGKDCVLLDDMIDTGGTIA GAVGVLKKAGAKSVVIACTHGVFSDPARERLSACGAEEVITTDTLPQSTEGWSNLTVLSIAPLLARTINEIFENGSVTTL FEGEA
Sequences:
>Translated_325_residues MTAHWKQNQKNLMLFSGRAHPELAEAVAKELDVNVTPMTARDFANGEIYVRFEESVRGSDCFVLQSHTQPLNKWLMEQLL MIDALKRGSAKRITAILPFYPYARQDKKHRGREPISARLIADLMLTAGADRIVSVDLHTDQIQGFFDGPVDHMHAMPILT DHIKENYNLDNICVVSPDAGRVKVAEKWANTLGDAPMAFVHKTRSTEVANQVVANRVVGDVDGKDCVLLDDMIDTGGTIA GAVGVLKKAGAKSVVIACTHGVFSDPARERLSACGAEEVITTDTLPQSTEGWSNLTVLSIAPLLARTINEIFENGSVTTL FEGEA >Mature_324_residues TAHWKQNQKNLMLFSGRAHPELAEAVAKELDVNVTPMTARDFANGEIYVRFEESVRGSDCFVLQSHTQPLNKWLMEQLLM IDALKRGSAKRITAILPFYPYARQDKKHRGREPISARLIADLMLTAGADRIVSVDLHTDQIQGFFDGPVDHMHAMPILTD HIKENYNLDNICVVSPDAGRVKVAEKWANTLGDAPMAFVHKTRSTEVANQVVANRVVGDVDGKDCVLLDDMIDTGGTIAG AVGVLKKAGAKSVVIACTHGVFSDPARERLSACGAEEVITTDTLPQSTEGWSNLTVLSIAPLLARTINEIFENGSVTTLF EGEA
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=314, Percent_Identity=42.3566878980892, Blast_Score=242, Evalue=3e-64, Organism=Homo sapiens, GI28557709, Length=314, Percent_Identity=42.0382165605096, Blast_Score=240, Evalue=1e-63, Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=42.3566878980892, Blast_Score=240, Evalue=1e-63, Organism=Homo sapiens, GI84875539, Length=317, Percent_Identity=41.9558359621451, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=30.635838150289, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI194018537, Length=332, Percent_Identity=31.9277108433735, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI310128524, Length=145, Percent_Identity=29.6551724137931, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI310115209, Length=145, Percent_Identity=29.6551724137931, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI310118259, Length=145, Percent_Identity=29.6551724137931, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI310119946, Length=145, Percent_Identity=29.6551724137931, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1787458, Length=315, Percent_Identity=43.8095238095238, Blast_Score=259, Evalue=1e-70, Organism=Caenorhabditis elegans, GI25149168, Length=314, Percent_Identity=42.3566878980892, Blast_Score=248, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17554702, Length=314, Percent_Identity=42.3566878980892, Blast_Score=247, Evalue=5e-66, Organism=Caenorhabditis elegans, GI71989924, Length=314, Percent_Identity=42.3566878980892, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=42.443729903537, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=32.5443786982249, Blast_Score=180, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6320946, Length=313, Percent_Identity=39.6166134185303, Blast_Score=234, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6319403, Length=314, Percent_Identity=39.4904458598726, Blast_Score=233, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6321776, Length=316, Percent_Identity=40.8227848101266, Blast_Score=231, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6322667, Length=201, Percent_Identity=39.8009950248756, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6324511, Length=95, Percent_Identity=36.8421052631579, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355239, Length=314, Percent_Identity=41.7197452229299, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI45551540, Length=337, Percent_Identity=39.1691394658754, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24651458, Length=355, Percent_Identity=29.0140845070423, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24651456, Length=355, Percent_Identity=29.0140845070423, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI281362873, Length=357, Percent_Identity=28.8515406162465, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24651454, Length=357, Percent_Identity=28.8515406162465, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24651462, Length=203, Percent_Identity=33.9901477832512, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24651464, Length=203, Percent_Identity=33.9901477832512, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI45552010, Length=203, Percent_Identity=33.9901477832512, Blast_Score=125, Evalue=3e-29,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 35551; Mature: 35420
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHWKQNQKNLMLFSGRAHPELAEAVAKELDVNVTPMTARDFANGEIYVRFEESVRGSD CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCC CFVLQSHTQPLNKWLMEQLLMIDALKRGSAKRITAILPFYPYARQDKKHRGREPISARLI EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHH ADLMLTAGADRIVSVDLHTDQIQGFFDGPVDHMHAMPILTDHIKENYNLDNICVVSPDAG HHHHHHCCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC RVKVAEKWANTLGDAPMAFVHKTRSTEVANQVVANRVVGDVDGKDCVLLDDMIDTGGTIA CEEHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCHHH GAVGVLKKAGAKSVVIACTHGVFSDPARERLSACGAEEVITTDTLPQSTEGWSNLTVLSI HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHH APLLARTINEIFENGSVTTLFEGEA HHHHHHHHHHHHHCCCEEEEECCCC >Mature Secondary Structure TAHWKQNQKNLMLFSGRAHPELAEAVAKELDVNVTPMTARDFANGEIYVRFEESVRGSD CCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCC CFVLQSHTQPLNKWLMEQLLMIDALKRGSAKRITAILPFYPYARQDKKHRGREPISARLI EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHH ADLMLTAGADRIVSVDLHTDQIQGFFDGPVDHMHAMPILTDHIKENYNLDNICVVSPDAG HHHHHHCCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC RVKVAEKWANTLGDAPMAFVHKTRSTEVANQVVANRVVGDVDGKDCVLLDDMIDTGGTIA CEEHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCHHH GAVGVLKKAGAKSVVIACTHGVFSDPARERLSACGAEEVITTDTLPQSTEGWSNLTVLSI HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHH APLLARTINEIFENGSVTTLFEGEA HHHHHHHHHHHHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]