| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is braF [H]
Identifier: 62389823
GI number: 62389823
Start: 991450
End: 992178
Strand: Direct
Name: braF [H]
Synonym: cg1065
Alternate gene names: 62389823
Gene position: 991450-992178 (Clockwise)
Preceding gene: 62389822
Following gene: 62389824
Centisome position: 30.2
GC content: 56.65
Gene sequence:
>729_bases ATGAGCCTTAAAATCACCAACCTCAAAGTCGCTTTCGGGTCGTTCATCGCCGTGAATGAGATTAGTTTTCAGGTGCTGCC CGGTCACGTCCACTTCCTCATCGGTGCCAACGGTGCAGGTAAAACCACCTGCATTGACGCGATCAGCGGATTGGCGCCGG GGCAGGGATCAGTGCAGTTGGATGGCACTGAGATTCTGGGAACCCCTGTGCACCGCATTGCTCGGATGGGTGTGGGGCGA ACGTTTCAGACCGCCAGCGTGTTTGAAGAATTGTCTGTGTTGCAGAATCTGGATATTGCGTGCGGGATTCATCGTCCGTT GCGGGCGCTTCTCGGGGTGCGTCATCGGATTGATCCCCGAATTGAACACGCCCTGGAGGTCACGGGTCTTGCTGATCTGG TGAATGCTCAGGCGGGAACCTTGTCGCATGGGCAGAAACAGTGGCTGGAAATTGCAATGTTGCTGGTGCAGGATGCGCAG GTGCTCATGCTGGATGAGCCGGTGGCGGGCATGAGTGAGGAGGAGCGTGTCGCAACGGGTGAGCTTTTGCAGAGGGTTGC GCGGGGACGGGTGGTGTTGGTGGTGGAGCACGATATGGAGTTCATGCGTCGTTTTGCCACTCGCGTCACTGTGATGAATC GCGGCACGATCTTGTGTGAGGGGTCGGTCGATGAGATTCAGGCGAATCCGGATGTGCAGTCCATTTATTTAGGTACGGCA GGGAAGTGA
Upstream 100 bases:
>100_bases TCCAGGGTGCGATCCTGGTTCTCGTGATCGTGTTGCTGCCGGGCGGAATTGCTTCAATTAAACTTTCCGCGCTCAAAAAT AAGGCCAGGAAGGCCACCTC
Downstream 100 bases:
>100_bases GTTAGTCATGTTGGAAATCACTAATTTGTGTGCAGGTTATGGCCGCACGCAGGTACTTCATTCTCTTTCAATCTCCACGA GCAGCAACGGCATCCTGTCG
Product: ABC-type branched-chain amino acid transport systems, ATPase component
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSLKITNLKVAFGSFIAVNEISFQVLPGHVHFLIGANGAGKTTCIDAISGLAPGQGSVQLDGTEILGTPVHRIARMGVGR TFQTASVFEELSVLQNLDIACGIHRPLRALLGVRHRIDPRIEHALEVTGLADLVNAQAGTLSHGQKQWLEIAMLLVQDAQ VLMLDEPVAGMSEEERVATGELLQRVARGRVVLVVEHDMEFMRRFATRVTVMNRGTILCEGSVDEIQANPDVQSIYLGTA GK
Sequences:
>Translated_242_residues MSLKITNLKVAFGSFIAVNEISFQVLPGHVHFLIGANGAGKTTCIDAISGLAPGQGSVQLDGTEILGTPVHRIARMGVGR TFQTASVFEELSVLQNLDIACGIHRPLRALLGVRHRIDPRIEHALEVTGLADLVNAQAGTLSHGQKQWLEIAMLLVQDAQ VLMLDEPVAGMSEEERVATGELLQRVARGRVVLVVEHDMEFMRRFATRVTVMNRGTILCEGSVDEIQANPDVQSIYLGTA GK >Mature_241_residues SLKITNLKVAFGSFIAVNEISFQVLPGHVHFLIGANGAGKTTCIDAISGLAPGQGSVQLDGTEILGTPVHRIARMGVGRT FQTASVFEELSVLQNLDIACGIHRPLRALLGVRHRIDPRIEHALEVTGLADLVNAQAGTLSHGQKQWLEIAMLLVQDAQV LMLDEPVAGMSEEERVATGELLQRVARGRVVLVVEHDMEFMRRFATRVTVMNRGTILCEGSVDEIQANPDVQSIYLGTAG K
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4674
COG function: function code R; Uncharacterized ABC-type transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=207, Percent_Identity=30.9178743961353, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI27881501, Length=212, Percent_Identity=27.3584905660377, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI30795238, Length=212, Percent_Identity=27.3584905660377, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI47078218, Length=233, Percent_Identity=28.3261802575107, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI45446740, Length=233, Percent_Identity=28.3261802575107, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI150417984, Length=215, Percent_Identity=31.1627906976744, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI105990541, Length=208, Percent_Identity=27.8846153846154, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI21536376, Length=225, Percent_Identity=26.2222222222222, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=28.8372093023256, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI27477115, Length=234, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27262624, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27262626, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=25.7142857142857, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI27436953, Length=229, Percent_Identity=25.3275109170306, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI171184400, Length=240, Percent_Identity=27.0833333333333, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI6005701, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI21536378, Length=223, Percent_Identity=25.1121076233184, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI255708477, Length=217, Percent_Identity=27.6497695852535, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI148612844, Length=217, Percent_Identity=27.6497695852535, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=36.4, Blast_Score=151, Evalue=4e-38, Organism=Escherichia coli, GI1790525, Length=232, Percent_Identity=29.3103448275862, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1786803, Length=237, Percent_Identity=28.2700421940928, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1788450, Length=224, Percent_Identity=29.9107142857143, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1789672, Length=232, Percent_Identity=30.1724137931034, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1786398, Length=237, Percent_Identity=28.2700421940928, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1788761, Length=238, Percent_Identity=31.0924369747899, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=27.8969957081545, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787792, Length=219, Percent_Identity=29.6803652968037, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=29.7071129707113, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1788897, Length=211, Percent_Identity=30.8056872037915, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788210, Length=208, Percent_Identity=30.2884615384615, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI87081782, Length=229, Percent_Identity=28.3842794759825, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=25.8474576271186, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1790467, Length=232, Percent_Identity=26.7241379310345, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788225, Length=242, Percent_Identity=28.099173553719, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=28.8793103448276, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87082268, Length=241, Percent_Identity=27.8008298755187, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=26.5822784810127, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=26.1802575107296, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790739, Length=232, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790162, Length=244, Percent_Identity=27.8688524590164, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI48995001, Length=218, Percent_Identity=26.1467889908257, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789991, Length=218, Percent_Identity=24.7706422018349, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786345, Length=223, Percent_Identity=27.8026905829596, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788165, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787370, Length=231, Percent_Identity=25.5411255411255, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787712, Length=250, Percent_Identity=26, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788472, Length=215, Percent_Identity=23.2558139534884, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787500, Length=248, Percent_Identity=27.0161290322581, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1789032, Length=227, Percent_Identity=25.5506607929515, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790190, Length=228, Percent_Identity=25, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1789873, Length=213, Percent_Identity=27.2300469483568, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789586, Length=227, Percent_Identity=26.431718061674, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788644, Length=247, Percent_Identity=25.9109311740891, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87081834, Length=212, Percent_Identity=25, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI87082267, Length=222, Percent_Identity=25.6756756756757, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI2367384, Length=229, Percent_Identity=27.0742358078603, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1789891, Length=208, Percent_Identity=27.8846153846154, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788506, Length=239, Percent_Identity=23.8493723849372, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=31.858407079646, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=32.2429906542056, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17510237, Length=230, Percent_Identity=29.1304347826087, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71983510, Length=208, Percent_Identity=28.3653846153846, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71983523, Length=208, Percent_Identity=28.3653846153846, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71983516, Length=208, Percent_Identity=28.3653846153846, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17565938, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI212646699, Length=213, Percent_Identity=28.169014084507, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI193211017, Length=209, Percent_Identity=26.7942583732057, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71996809, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211015, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17569143, Length=223, Percent_Identity=26.457399103139, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24643674, Length=224, Percent_Identity=29.4642857142857, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI221512771, Length=223, Percent_Identity=27.8026905829596, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24666092, Length=241, Percent_Identity=26.1410788381743, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24648314, Length=233, Percent_Identity=25.7510729613734, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI28573571, Length=236, Percent_Identity=23.728813559322, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28573573, Length=232, Percent_Identity=24.1379310344828, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI116007184, Length=224, Percent_Identity=25.4464285714286, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI221500365, Length=224, Percent_Identity=25.4464285714286, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574533, Length=207, Percent_Identity=29.951690821256, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI28574150, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI116007328, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26153; Mature: 26022
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKITNLKVAFGSFIAVNEISFQVLPGHVHFLIGANGAGKTTCIDAISGLAPGQGSVQL CCEEEEEEEEECCCEEEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE DGTEILGTPVHRIARMGVGRTFQTASVFEELSVLQNLDIACGIHRPLRALLGVRHRIDPR CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCHH IEHALEVTGLADLVNAQAGTLSHGQKQWLEIAMLLVQDAQVLMLDEPVAGMSEEERVATG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH ELLQRVARGRVVLVVEHDMEFMRRFATRVTVMNRGTILCEGSVDEIQANPDVQSIYLGTA HHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEECCEEEECCCHHHHCCCCCCEEEEEECC GK CC >Mature Secondary Structure SLKITNLKVAFGSFIAVNEISFQVLPGHVHFLIGANGAGKTTCIDAISGLAPGQGSVQL CEEEEEEEEECCCEEEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE DGTEILGTPVHRIARMGVGRTFQTASVFEELSVLQNLDIACGIHRPLRALLGVRHRIDPR CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCHH IEHALEVTGLADLVNAQAGTLSHGQKQWLEIAMLLVQDAQVLMLDEPVAGMSEEERVATG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH ELLQRVARGRVVLVVEHDMEFMRRFATRVTVMNRGTILCEGSVDEIQANPDVQSIYLGTA HHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEECCEEEECCCHHHHCCCCCCEEEEEECC GK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]