| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is pmmB [C]
Identifier: 62389575
GI number: 62389575
Start: 701854
End: 703446
Strand: Reverse
Name: pmmB [C]
Synonym: cg0788
Alternate gene names: 62389575
Gene position: 703446-701854 (Counterclockwise)
Preceding gene: 62389581
Following gene: 62389572
Centisome position: 21.43
GC content: 54.68
Gene sequence:
>1593_bases ATGGACGAGTCTCGTCAGCTTAGTTTCGGCACAGCAGGGTTGCGTGCACCAGTTGGCCCGGCGCGCCATCAGATGAATGT TTTGCAGGTAACCAGAACTACAGCAGGTGTTGCTAGTTGGTTGGCAGAACGTGCGGCACTAAATCCAGTGCCGCATTTGG TTCCTGAGGATGAAACAGGAATCGGCAGGGCGTTGTATCCCCAAGATGGTCCGTTGCGGGTCGTTGTGGGGTATGACGCT CGCTATGGTTCGCATACTTTTGCTGCAACCACTGCGGAGGTGTTCGCGGGTGCTGGTTTTGAGGTGACGTTGCTCCCCAC GCCTAGCCCTACGCCGTTGATTCCGTGGTTGGTGAACAAGCATGGGTTGGATGCGGGCGTTCAGATCACGGCTTCGCATA ATGGTGCGGCGGACAATGGCTACAAGGTGTTTTTGTCTAATGGTCGCCAGCTTTATTCTGAACTGGAGCCTGAGCTTGAG GCGCATATCAATGCTGTGGAAGATCCGATTCGGGTTCCTCGGGTGACGGTGCGCCCCACTGCTGATCAGCTGCGTCGATA TGTTGATGAGATGGTGTCGTTGGTGACTCCTGATCAGGCTGATTTGTTGCGGGTGAATTCTGAGCGGGGCAATCTTCGCG TGGTGTATACCGCTCTGCATGGTGTGGGTGGCCGCGCGATGGCCAATGCTTTCCAATTTGCTGGTTTTCCCCATACTCAT GGCGTGAAGGCTCAGCAGTATCCTGATCCCACCTTCCCCACTGTGGCGTTCCCCAATCCGGAAGAGCCTTCTGCGATTGA GTTGTTGTTGGAACGCGCAAAGGAAAAGAACGCTGACATTTTGTTTGCGCTTGATCCTGATGCCGATCGTTGTGCTGTGG GTATTCGTACCGCTGATGGCGGCCACCGAATGCTCTCTGGCGATGAGGTGGGCACACTTTTGGCTACTCGTTTGGTTCCG GAGTATTCCGGTGAAGGCCCACGTCCCGTGGTTGCCACCACGGTGGTGTCTTCGCAGCTTCTGGGTATCATCGCCGAGGA TAAAGGGTGGGATTATTCCGAGACACTGACGGGATTCAAAAATCTGTCGAGGGCTGCCGATGGTCTCGACGGACCGCTTG CTTTCGCTTATGAGGAAGCTGTGGGCACCTGCCCGGTTCCAGATGTCGTGCCGGATAAGGACGGCATCTCTACAGCGTTG TTCATGGCGTCGTGGGCTGCCGAACTGAAGGCTCAGGGCGCAAGCCTGCAGCAAAAACTCAATGAGTTGTATCGCCGATA TGGGTATTTTGCGTCCTCGCAAATTGCTGTGCGCACGAGCAGTCCACGCGAGTTAGTTGATCACTGGATTGCGCATCCTC AGCAAGAACTCATTGGAGTGTCTGTCACCCCACATATTCTTCCTGAAAAACAGGGCATTGCTTTGCATGGCCAGGTGGGG CATGTGCATATCCGTGCTATTGGTCGAGTCTCTGGAACTGAGGCGAAAGCCAAGCTCTATTTGGAAGTTGGTCAGGCCAG CTCCCATGATGAAGCAGCTCAGTTGTTGCATCAGCTGGAGGATGAAGTCCAAAGCTGGTTGAGCAAGCTTTAG
Upstream 100 bases:
>100_bases AATACCTTTCTGTTTTGTCCGCAGGCGTATCAGGAAAACCTGCAGCGCGGTAGAGTCGAGTCTAATAGTGATCCCACGAA AACAAAGGATCGGGGTGTTC
Downstream 100 bases:
>100_bases TTTCCTGGCTGCTCGCGGTTGCGGGTGAGCCGGAGGTCTGCGTCGAAAAGCAGTGGATCTTTTTCTGAAGGCCACCGCAC GTCAATGGCGGCGGTTTCGT
Product: phosphoglucomutase/phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTAGVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVVVGYDA RYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIPWLVNKHGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELE AHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLVTPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTH GVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKEKNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLATRLVP EYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSETLTGFKNLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTAL FMASWAAELKAQGASLQQKLNELYRRYGYFASSQIAVRTSSPRELVDHWIAHPQQELIGVSVTPHILPEKQGIALHGQVG HVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQLLHQLEDEVQSWLSKL
Sequences:
>Translated_530_residues MDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTAGVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVVVGYDA RYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIPWLVNKHGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELE AHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLVTPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTH GVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKEKNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLATRLVP EYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSETLTGFKNLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTAL FMASWAAELKAQGASLQQKLNELYRRYGYFASSQIAVRTSSPRELVDHWIAHPQQELIGVSVTPHILPEKQGIALHGQVG HVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQLLHQLEDEVQSWLSKL >Mature_530_residues MDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTAGVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVVVGYDA RYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIPWLVNKHGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELE AHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLVTPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTH GVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKEKNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLATRLVP EYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSETLTGFKNLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTAL FMASWAAELKAQGASLQQKLNELYRRYGYFASSQIAVRTSSPRELVDHWIAHPQQELIGVSVTPHILPEKQGIALHGQVG HVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQLLHQLEDEVQSWLSKL
Specific function: Involved In The Biosynthesis Of The Capsular Polysaccharide Colanic Acid. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI31377548, Length=567, Percent_Identity=31.5696649029982, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI63055049, Length=449, Percent_Identity=33.630289532294, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71993870, Length=439, Percent_Identity=33.4851936218679, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI71993878, Length=295, Percent_Identity=32.5423728813559, Blast_Score=137, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323934, Length=584, Percent_Identity=29.2808219178082, Blast_Score=191, Evalue=2e-49, Organism=Drosophila melanogaster, GI20129809, Length=455, Percent_Identity=34.0659340659341, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24651977, Length=455, Percent_Identity=34.0659340659341, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24653722, Length=469, Percent_Identity=30.9168443496802, Blast_Score=190, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 57256; Mature: 57256
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTAGVASWLAERAALNPVPHLVPEDETG CCCCCCEECCCCCCCCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC IGRALYPQDGPLRVVVGYDARYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIPWLVNK CCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCC HGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELEAHINAVEDPIRVPRVTVRPT CCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCC ADQLRRYVDEMVSLVTPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTH HHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCC GVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKEKNADILFALDPDADRCAVGIRTADG CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCC GHRMLSGDEVGTLLATRLVPEYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSETLTGFK CCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCHHHHHHHHH NLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTALFMASWAAELKAQGASLQQKL HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH NELYRRYGYFASSQIAVRTSSPRELVDHWIAHPQQELIGVSVTPHILPEKQGIALHGQVG HHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCEEEECCCC HVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQLLHQLEDEVQSWLSKL EEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTAGVASWLAERAALNPVPHLVPEDETG CCCCCCEECCCCCCCCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC IGRALYPQDGPLRVVVGYDARYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIPWLVNK CCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCC HGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELEAHINAVEDPIRVPRVTVRPT CCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCC ADQLRRYVDEMVSLVTPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTH HHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCC GVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKEKNADILFALDPDADRCAVGIRTADG CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCC GHRMLSGDEVGTLLATRLVPEYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSETLTGFK CCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCHHHHHHHHH NLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTALFMASWAAELKAQGASLQQKL HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH NELYRRYGYFASSQIAVRTSSPRELVDHWIAHPQQELIGVSVTPHILPEKQGIALHGQVG HHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCEEEECCCC HVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQLLHQLEDEVQSWLSKL EEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]