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The map label for this gene is yhjD [H]

Identifier: 62389567

GI number: 62389567

Start: 694501

End: 695586

Strand: Direct

Name: yhjD [H]

Synonym: cg0780

Alternate gene names: 62389567

Gene position: 694501-695586 (Clockwise)

Preceding gene: 62389566

Following gene: 62389568

Centisome position: 21.16

GC content: 53.68

Gene sequence:

>1086_bases
ATGTCTACTAGAACAACGCCACAAGACCGTTATACCGACGAATACGGCATCGAACGCGTCAACAAGGATGAACCCGGCCT
GGTGGACAAACTCCGGGACAAGCACGACTGGTTTGATCATCTCATGCGCATGAATGAACGTTTCGGCGCAAAAGGTGGCA
ACCAATTGTCGGCGGGTATTACGTATTTCTCCGTGCTGTCGATCTTCCCGATTGCCATGCTTGTCTTCGGTATTGCAGGT
GTCATCCTTGCCGGAAACCCTGAAGTTCTCACAGATATTCAAAATCGAATCAACGATGCTTTAGAAGGCGAGATCGGTAA
CACCGTCAACGGCATCATTGATTCCGCGATTGCGCAGCGTGGTGCTGTGTTGGGCATTGGTGGTGTAACTGCCCTGTGGT
CTGGACTGGGGTGGATGGCGAACCTGCGCTTTGGAGTTTCCCGCATGTGGGCCATTGACCCAACTGAAGGCAACTTCATT
CAAAAGAAGCTCACCGACTTGGTCGCGCTGATCGTCTTGCTGCTGGCCATGGGCGTAGCCTTCGGTATCACGGCGCTCGG
TGCTTCCGGACTAACCAAAAACCTGCTGGACTTTGTGGGCCTGGGGGAGATTCCGGGCATTAGCTACATCACCTGGGTGG
TCGCAGCACTTGTTGGTGTCTTGGCTAACTTCCTGGTGTTCATGTGGCTGATTTTCTCCCTGCCACGTACCAAAGTTCCC
ATGAAACCGGGTCTTCAGGCAGCACTGCTTGGCGCAATCGGTTTTGAGGTGGTCAAGCAGGTTGGATCGCTGTTGGCTTC
AAATGCATTGAGTAACCCCGCGGGTGCAGCATTCGGTCCGATCATCGGCATCATGGTTGTGCTGTATTTGATCTGGCGCA
TCCTCATGTATTGCTCTGCGTGGGCTGCCACCAGTGAAGAAGCGTTGCGTCTTGCGACTGTTCCAGCACCAGAGCCTGCG
ATCATTCGGGTTCGCCATGAAATTGATCCAGGTGAAGAAGTCTCCCAATCTGCTCGAAAAGTGGGCATTGGAGTGGCCGT
GGGTGCCGCGACTGCGGGTGCTTTTGCGCTGTTGCGTAAAAAATAG

Upstream 100 bases:

>100_bases
CCCTCGATTATTACAATCCGGCTACTTCGGAAGCGTTTGTGGCCGGATTTTTCTATCCTGGAAGGTATTAATACTTCTTT
AAGGGTCGGAGGATTTTCGT

Downstream 100 bases:

>100_bases
TTTTTATTAAGGGCATTCCCTGATTCCCAGGTGGTGCCACATTGTTTATGGTGGAGATATGAACACGAACTTGCCGAACC
TATACACCGCATTTGACCTT

Product: ribonuclease BN family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSTRTTPQDRYTDEYGIERVNKDEPGLVDKLRDKHDWFDHLMRMNERFGAKGGNQLSAGITYFSVLSIFPIAMLVFGIAG
VILAGNPEVLTDIQNRINDALEGEIGNTVNGIIDSAIAQRGAVLGIGGVTALWSGLGWMANLRFGVSRMWAIDPTEGNFI
QKKLTDLVALIVLLLAMGVAFGITALGASGLTKNLLDFVGLGEIPGISYITWVVAALVGVLANFLVFMWLIFSLPRTKVP
MKPGLQAALLGAIGFEVVKQVGSLLASNALSNPAGAAFGPIIGIMVVLYLIWRILMYCSAWAATSEEALRLATVPAPEPA
IIRVRHEIDPGEEVSQSARKVGIGVAVGAATAGAFALLRKK

Sequences:

>Translated_361_residues
MSTRTTPQDRYTDEYGIERVNKDEPGLVDKLRDKHDWFDHLMRMNERFGAKGGNQLSAGITYFSVLSIFPIAMLVFGIAG
VILAGNPEVLTDIQNRINDALEGEIGNTVNGIIDSAIAQRGAVLGIGGVTALWSGLGWMANLRFGVSRMWAIDPTEGNFI
QKKLTDLVALIVLLLAMGVAFGITALGASGLTKNLLDFVGLGEIPGISYITWVVAALVGVLANFLVFMWLIFSLPRTKVP
MKPGLQAALLGAIGFEVVKQVGSLLASNALSNPAGAAFGPIIGIMVVLYLIWRILMYCSAWAATSEEALRLATVPAPEPA
IIRVRHEIDPGEEVSQSARKVGIGVAVGAATAGAFALLRKK
>Mature_360_residues
STRTTPQDRYTDEYGIERVNKDEPGLVDKLRDKHDWFDHLMRMNERFGAKGGNQLSAGITYFSVLSIFPIAMLVFGIAGV
ILAGNPEVLTDIQNRINDALEGEIGNTVNGIIDSAIAQRGAVLGIGGVTALWSGLGWMANLRFGVSRMWAIDPTEGNFIQ
KKLTDLVALIVLLLAMGVAFGITALGASGLTKNLLDFVGLGEIPGISYITWVVAALVGVLANFLVFMWLIFSLPRTKVPM
KPGLQAALLGAIGFEVVKQVGSLLASNALSNPAGAAFGPIIGIMVVLYLIWRILMYCSAWAATSEEALRLATVPAPEPAI
IRVRHEIDPGEEVSQSARKVGIGVAVGAATAGAFALLRKK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=273, Percent_Identity=35.8974358974359, Blast_Score=174, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 38531; Mature: 38399

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRTTPQDRYTDEYGIERVNKDEPGLVDKLRDKHDWFDHLMRMNERFGAKGGNQLSAGI
CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TYFSVLSIFPIAMLVFGIAGVILAGNPEVLTDIQNRINDALEGEIGNTVNGIIDSAIAQR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GAVLGIGGVTALWSGLGWMANLRFGVSRMWAIDPTEGNFIQKKLTDLVALIVLLLAMGVA
CCEEECCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGITALGASGLTKNLLDFVGLGEIPGISYITWVVAALVGVLANFLVFMWLIFSLPRTKVP
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MKPGLQAALLGAIGFEVVKQVGSLLASNALSNPAGAAFGPIIGIMVVLYLIWRILMYCSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WAATSEEALRLATVPAPEPAIIRVRHEIDPGEEVSQSARKVGIGVAVGAATAGAFALLRK
HHCCCHHHHEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure 
STRTTPQDRYTDEYGIERVNKDEPGLVDKLRDKHDWFDHLMRMNERFGAKGGNQLSAGI
CCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TYFSVLSIFPIAMLVFGIAGVILAGNPEVLTDIQNRINDALEGEIGNTVNGIIDSAIAQR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GAVLGIGGVTALWSGLGWMANLRFGVSRMWAIDPTEGNFIQKKLTDLVALIVLLLAMGVA
CCEEECCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGITALGASGLTKNLLDFVGLGEIPGISYITWVVAALVGVLANFLVFMWLIFSLPRTKVP
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MKPGLQAALLGAIGFEVVKQVGSLLASNALSNPAGAAFGPIIGIMVVLYLIWRILMYCSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WAATSEEALRLATVPAPEPAIIRVRHEIDPGEEVSQSARKVGIGVAVGAATAGAFALLRK
HHCCCHHHHEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]