| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62389523
Identifier: 62389523
GI number: 62389523
Start: 646634
End: 649051
Strand: Reverse
Name: 62389523
Synonym: cg0732
Alternate gene names: NA
Gene position: 649051-646634 (Counterclockwise)
Preceding gene: 62389524
Following gene: 62389521
Centisome position: 19.77
GC content: 56.0
Gene sequence:
>2418_bases ATGTTCAGGCTTGCTTTCGCTCAACTTCGGCGACGAGGTGGGCGCTATTTTTCATTGTTTTTCGCGATTTTCGCTTCGGT TGCATTGACTGTTAGCGCCACTGCGTTGACAAATTCTTTGGTGTCCAGTGTTAATGATCTTTTTGCCAAGCCGTATGAAA ACGCTGATCTTGTGGTCACGGTGTCTGCGAAAAACGAAGATTCCTTTGCAGCTTTTGAGCAACAATTAGCTACGACACCT GGTGTTGAAGCTCTGGCTTTTGATCAAAATTTTGCAGCCTCTGTAAAGCAATCAGACGGGATTTACGCCAGTACTTCAGT CCAGTCAATTTCGGAAGGCCCACTGCAGTGGCGGCCAATCCTAGAAGGCCGATTGCCCCAAGGACCTGGTGAGATTGCAG TAACAACGGCCCCGGGTGCGCCTGAAGTTGGTGAGCACGTATCCATTCGCCTGTCCCAAAACACTGAGGACACTGAGGTT CTTGTGGTTGGCGTGGTGGAGCCAGCGGCGCAGGAAACTTTAGGTGGCGCACCGTTCGTTGTGGCGTCTCCTGATGCGCT GATGGAGTGGAATTCTTCCGGTGTGCGGGGTGAATTCCGAGTGGCAACTTCCGATCCTGCCTCGCTAGAGGCTGCAAGCT TTAGCGACGCTACGGTGGTGGTTGCTTCGGCGGAGGGGCACGTCGATAAGCTTGCTGATTCTTATTTGGGCCAGCGAGAT CGCTATTTCTTGCTGCTCGCAGCGTTTGTGGCAGTGGCTGCTGCCGTGGCGTTTTTGGTGGTCTTTTCTGCATATTCGGT GCTCACTGGTGAGCGAGTTCGCGAGTTCGGGCTGATTCGTTCAGTGGGCGCATCGACGCCGCAGATTTTGGGGTCAGTGA TTTTTGAAGCCGGCATCCTCGGTGTGGTGGCTGCTGGTTTTGGTGCGCCCGCCGGATTGATGGCGGCGCGTTTGTTGGCG GATAATGCCGCACGTTTTGGCATTCGTGTGCCCATTGATGTGATTGATCTGCCAAGTAGCACGATGTGGCTCATCGCTGG CGTCGGCGTGGTGATGTCCGTGATTGCGGCATTACCGGCAGTGTTCAGTGTGTGCAGAAAATCCGCAGTGGAATCACTGA GTACGCCTGCTATTTCGAGGACTTCCCCCTGGTTCGGTGCATTATGGTTGCTGCTCGCGGGCATTGTGGGCGCCGGCGGA ATGTGGGCGTATGAGGCAACCTCGGACTACCGCGGCATGCGTTCAGTGGCTTTATCCATCGCCGGTTCAGGCGCTTTGGT GTGTGCGTTGTTGATTGCCACGGCGGTGCTCGTGCCCTGGTTATTGCACGTATTCTCCAGGATTGTGGGCGGCACCGTCC CAACACTTCAGTTGGGATTGGCGTTTGCAGCAAAGCAGAAATCTCGTTCGGCGGCGCTGATCGCTGTGATTCTTGCTGGT TCTGCATTAAGCTCCGCTGTTCTGCATGGCCAGGCACATATCGGCACGCATTTGGTGGCCGTGGCTAAAGGCATGGGCGG CACAGACATGATGGTTACAGCGCTTGATGGGGAAATCCCCGCCGGAATGCTGGAGGAAATCTCTAGCATCGACGGCGTGA AAACTGCCATCGCGCCAGCCACCACCGCTGTGGAATTGGAAGATTCCGGCAATTTCTCTGTGCTCATGCTCGCTGAAGAA GACGGAGCCTCCGTGATGCGCGCAGGCGATACTGGTGCACCAGCTGGTGGCCTTGTTTTGGGCAGAAACTCTCCTGACCA GGATGCTTACCCGGCCGGCCAGGCTGCAAACATCATTGTCGCGGATACCCCAACGCAGGCGGAAATCTTCCACAGCGACA ACTACTTCTCCATGATCGACCCAGCACTCGCCACCGGCCCCAGCACCACACGCAACGTACTGATCCTGCTCGACGGCGAC TCCAACCAGGCCCCCGACAACGCCACGGCGCAGGCGGTACGCAAGACCATTTCGCTTTTCGACGGACGATACTCCATCAC CGAGGGTTTCTCCGCCCGCCAAAACACTTTTGAACTGGTTTCCCGCATCACCACCATGTCCACACTGCTTGCCATCGTGG CCTTAGCGATCGCTGCCGTTGGCCTGATCAACACAGTGGCACTCACCATTTCTGAGCGTGCCCGCGATCGTTATTTGCTG CGCACCATTGGACTGACCTCAACTGGTCAGATTCTGGTGATGGCTATTGAAATGATCGCGCTCTCATTGCCGGCTGCCAT TGTTGGTGCAGTTTCGGGAGGATTCTTAGGCAGATTCGTTGCCAGTTCTGCCACCAACACCGCTGCGACGGCACCACTTC AAGTAGACATTCTCGGCGGAACGGTTCTCGCGATGGTCGCAGGATCTGTACTGTGCGCGCTCATCGTGCTGGCGAACAAA CGACGTCGGGTGGTTTGA
Upstream 100 bases:
>100_bases TTGTCACCCACGATAAAGATGCTGCTCACCGTGGTGACGTGTTGATCACAATGCGTGATGGCAAGATCATCGATACGGCA GATTTGCGGGTGGGGCGTTA
Downstream 100 bases:
>100_bases TTATAAAATCCAAAAATCGACTATTTACCTGGGTTCTTTCGAACCAGAACCAGTTGACAACATTTCACAAACCGCCTAAG CAGAATCGAAAGCCAAGATG
Product: ABC transporter inner membrane protein
Products: NA
Alternate protein names: Abc Transporter Integral Membrane Subunit; ABC Transporter Permease Protein
Number of amino acids: Translated: 805; Mature: 805
Protein sequence:
>805_residues MFRLAFAQLRRRGGRYFSLFFAIFASVALTVSATALTNSLVSSVNDLFAKPYENADLVVTVSAKNEDSFAAFEQQLATTP GVEALAFDQNFAASVKQSDGIYASTSVQSISEGPLQWRPILEGRLPQGPGEIAVTTAPGAPEVGEHVSIRLSQNTEDTEV LVVGVVEPAAQETLGGAPFVVASPDALMEWNSSGVRGEFRVATSDPASLEAASFSDATVVVASAEGHVDKLADSYLGQRD RYFLLLAAFVAVAAAVAFLVVFSAYSVLTGERVREFGLIRSVGASTPQILGSVIFEAGILGVVAAGFGAPAGLMAARLLA DNAARFGIRVPIDVIDLPSSTMWLIAGVGVVMSVIAALPAVFSVCRKSAVESLSTPAISRTSPWFGALWLLLAGIVGAGG MWAYEATSDYRGMRSVALSIAGSGALVCALLIATAVLVPWLLHVFSRIVGGTVPTLQLGLAFAAKQKSRSAALIAVILAG SALSSAVLHGQAHIGTHLVAVAKGMGGTDMMVTALDGEIPAGMLEEISSIDGVKTAIAPATTAVELEDSGNFSVLMLAEE DGASVMRAGDTGAPAGGLVLGRNSPDQDAYPAGQAANIIVADTPTQAEIFHSDNYFSMIDPALATGPSTTRNVLILLDGD SNQAPDNATAQAVRKTISLFDGRYSITEGFSARQNTFELVSRITTMSTLLAIVALAIAAVGLINTVALTISERARDRYLL RTIGLTSTGQILVMAIEMIALSLPAAIVGAVSGGFLGRFVASSATNTAATAPLQVDILGGTVLAMVAGSVLCALIVLANK RRRVV
Sequences:
>Translated_805_residues MFRLAFAQLRRRGGRYFSLFFAIFASVALTVSATALTNSLVSSVNDLFAKPYENADLVVTVSAKNEDSFAAFEQQLATTP GVEALAFDQNFAASVKQSDGIYASTSVQSISEGPLQWRPILEGRLPQGPGEIAVTTAPGAPEVGEHVSIRLSQNTEDTEV LVVGVVEPAAQETLGGAPFVVASPDALMEWNSSGVRGEFRVATSDPASLEAASFSDATVVVASAEGHVDKLADSYLGQRD RYFLLLAAFVAVAAAVAFLVVFSAYSVLTGERVREFGLIRSVGASTPQILGSVIFEAGILGVVAAGFGAPAGLMAARLLA DNAARFGIRVPIDVIDLPSSTMWLIAGVGVVMSVIAALPAVFSVCRKSAVESLSTPAISRTSPWFGALWLLLAGIVGAGG MWAYEATSDYRGMRSVALSIAGSGALVCALLIATAVLVPWLLHVFSRIVGGTVPTLQLGLAFAAKQKSRSAALIAVILAG SALSSAVLHGQAHIGTHLVAVAKGMGGTDMMVTALDGEIPAGMLEEISSIDGVKTAIAPATTAVELEDSGNFSVLMLAEE DGASVMRAGDTGAPAGGLVLGRNSPDQDAYPAGQAANIIVADTPTQAEIFHSDNYFSMIDPALATGPSTTRNVLILLDGD SNQAPDNATAQAVRKTISLFDGRYSITEGFSARQNTFELVSRITTMSTLLAIVALAIAAVGLINTVALTISERARDRYLL RTIGLTSTGQILVMAIEMIALSLPAAIVGAVSGGFLGRFVASSATNTAATAPLQVDILGGTVLAMVAGSVLCALIVLANK RRRVV >Mature_805_residues MFRLAFAQLRRRGGRYFSLFFAIFASVALTVSATALTNSLVSSVNDLFAKPYENADLVVTVSAKNEDSFAAFEQQLATTP GVEALAFDQNFAASVKQSDGIYASTSVQSISEGPLQWRPILEGRLPQGPGEIAVTTAPGAPEVGEHVSIRLSQNTEDTEV LVVGVVEPAAQETLGGAPFVVASPDALMEWNSSGVRGEFRVATSDPASLEAASFSDATVVVASAEGHVDKLADSYLGQRD RYFLLLAAFVAVAAAVAFLVVFSAYSVLTGERVREFGLIRSVGASTPQILGSVIFEAGILGVVAAGFGAPAGLMAARLLA DNAARFGIRVPIDVIDLPSSTMWLIAGVGVVMSVIAALPAVFSVCRKSAVESLSTPAISRTSPWFGALWLLLAGIVGAGG MWAYEATSDYRGMRSVALSIAGSGALVCALLIATAVLVPWLLHVFSRIVGGTVPTLQLGLAFAAKQKSRSAALIAVILAG SALSSAVLHGQAHIGTHLVAVAKGMGGTDMMVTALDGEIPAGMLEEISSIDGVKTAIAPATTAVELEDSGNFSVLMLAEE DGASVMRAGDTGAPAGGLVLGRNSPDQDAYPAGQAANIIVADTPTQAEIFHSDNYFSMIDPALATGPSTTRNVLILLDGD SNQAPDNATAQAVRKTISLFDGRYSITEGFSARQNTFELVSRITTMSTLLAIVALAIAAVGLINTVALTISERARDRYLL RTIGLTSTGQILVMAIEMIALSLPAAIVGAVSGGFLGRFVASSATNTAATAPLQVDILGGTVLAMVAGSVLCALIVLANK RRRVV
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83196; Mature: 83196
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLAFAQLRRRGGRYFSLFFAIFASVALTVSATALTNSLVSSVNDLFAKPYENADLVVT CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VSAKNEDSFAAFEQQLATTPGVEALAFDQNFAASVKQSDGIYASTSVQSISEGPLQWRPI EECCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEECCHHHHCCCCCEEEEC LEGRLPQGPGEIAVTTAPGAPEVGEHVSIRLSQNTEDTEVLVVGVVEPAAQETLGGAPFV CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCEE VASPDALMEWNSSGVRGEFRVATSDPASLEAASFSDATVVVASAEGHVDKLADSYLGQRD EECCHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCEEEEEECCCCHHHHHHHHCCCCC RYFLLLAAFVAVAAAVAFLVVFSAYSVLTGERVREFGLIRSVGASTPQILGSVIFEAGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GVVAAGFGAPAGLMAARLLADNAARFGIRVPIDVIDLPSSTMWLIAGVGVVMSVIAALPA HHHHHCCCCCHHHHHHHHHHCCHHHCEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHH VFSVCRKSAVESLSTPAISRTSPWFGALWLLLAGIVGAGGMWAYEATSDYRGMRSVALSI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHC AGSGALVCALLIATAVLVPWLLHVFSRIVGGTVPTLQLGLAFAAKQKSRSAALIAVILAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHEEHHHHHC SALSSAVLHGQAHIGTHLVAVAKGMGGTDMMVTALDGEIPAGMLEEISSIDGVKTAIAPA HHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHCCC TTAVELEDSGNFSVLMLAEEDGASVMRAGDTGAPAGGLVLGRNSPDQDAYPAGQAANIIV CEEEEEECCCCEEEEEEECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEE ADTPTQAEIFHSDNYFSMIDPALATGPSTTRNVLILLDGDSNQAPDNATAQAVRKTISLF ECCCCCEEEEECCCCHHHHCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH DGRYSITEGFSARQNTFELVSRITTMSTLLAIVALAIAAVGLINTVALTISERARDRYLL CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIGLTSTGQILVMAIEMIALSLPAAIVGAVSGGFLGRFVASSATNTAATAPLQVDILGG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCH TVLAMVAGSVLCALIVLANKRRRVV HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFRLAFAQLRRRGGRYFSLFFAIFASVALTVSATALTNSLVSSVNDLFAKPYENADLVVT CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VSAKNEDSFAAFEQQLATTPGVEALAFDQNFAASVKQSDGIYASTSVQSISEGPLQWRPI EECCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEECCHHHHCCCCCEEEEC LEGRLPQGPGEIAVTTAPGAPEVGEHVSIRLSQNTEDTEVLVVGVVEPAAQETLGGAPFV CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCEE VASPDALMEWNSSGVRGEFRVATSDPASLEAASFSDATVVVASAEGHVDKLADSYLGQRD EECCHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCEEEEEECCCCHHHHHHHHCCCCC RYFLLLAAFVAVAAAVAFLVVFSAYSVLTGERVREFGLIRSVGASTPQILGSVIFEAGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GVVAAGFGAPAGLMAARLLADNAARFGIRVPIDVIDLPSSTMWLIAGVGVVMSVIAALPA HHHHHCCCCCHHHHHHHHHHCCHHHCEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHH VFSVCRKSAVESLSTPAISRTSPWFGALWLLLAGIVGAGGMWAYEATSDYRGMRSVALSI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHC AGSGALVCALLIATAVLVPWLLHVFSRIVGGTVPTLQLGLAFAAKQKSRSAALIAVILAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHEEHHHHHC SALSSAVLHGQAHIGTHLVAVAKGMGGTDMMVTALDGEIPAGMLEEISSIDGVKTAIAPA HHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHCCC TTAVELEDSGNFSVLMLAEEDGASVMRAGDTGAPAGGLVLGRNSPDQDAYPAGQAANIIV CEEEEEECCCCEEEEEEECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEE ADTPTQAEIFHSDNYFSMIDPALATGPSTTRNVLILLDGDSNQAPDNATAQAVRKTISLF ECCCCCEEEEECCCCHHHHCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH DGRYSITEGFSARQNTFELVSRITTMSTLLAIVALAIAAVGLINTVALTISERARDRYLL CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIGLTSTGQILVMAIEMIALSLPAAIVGAVSGGFLGRFVASSATNTAATAPLQVDILGG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCH TVLAMVAGSVLCALIVLANKRRRVV HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA