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The map label for this gene is tnp1c(ISCg1c)

Identifier: 62389488

GI number: 62389488

Start: 611123

End: 612433

Strand: Direct

Name: tnp1c(ISCg1c)

Synonym: cg0692

Alternate gene names: NA

Gene position: 611123-612433 (Clockwise)

Preceding gene: 62389487

Following gene: 62389489

Centisome position: 18.62

GC content: 51.95

Gene sequence:

>1311_bases
ATGAAGTCTACCGGCAACATCATCGCTGACACCATCTGCCGCACTGCGGAACTAGGACTCACCATCACCGGCGCTTCCGA
TGCAGGTGATTACACCCTGATCGAAGCAGACGCACTCGACTACACCTCCACCTGCCCAGAATGCTCCCAACCTGGGGTGT
TTCGTCATCACACCCACCGGATGCTCATTGATTTACCCATCGTCGGGTTTCCCACCAAACTGTTTATCCGTCTACCTCGC
TACCGGTGCACCAACCCCACATGTAAGCAAAAGTATTTCCAAGCAGAACTAAGCTGCGCTGACCACGGTAAAAAGGTCAC
CCACCGGGTCACCCGCTGGATTTTACAACGCCTTGCTATTGACCGGATGAGTGTTCACGCAACCGCGAAAGCACTTGGGC
TAGGGTGGGATTTAACCTGCCAACTAGCCCTCGATATGTGCCGTGAGCTGGTCTATAACGATCCTCACCATCTTGATGGA
GTGTATGTCATTGGGGTGGATGAGCATAAGTGGTCACATAATAGGGCTAAGCATGGTGATGGGTTTGTCACCGTGATTGT
CGATATGACCGGGCATCGGTATGACTCACGGTGTCCTGCCCGGTTATTAGATGTCGTCCCAGGTCGTAGTGCTGATGCTT
TACGGTCCTGGCTTGGCTCCCGCGGTGAACAGTTCCGCAATCAGATACGGATCGTGTCCATGGATGGATTCCAAGGCTAC
GCCACAGCAAGTAAAGAACTCATTCCTTCTGCTCGTCGCGTGATGGATCCATTCCATGTTGTGCGGCTTGCTGGTGACAA
GCTCACCGCCTGCCGGCAACGCCTCCAGCGGGAGAAATACCAGCGTCGTGGTTTAAGCCAGGATCCGTTGTATAAAAACC
GGAAGACCTTGTTGACCACGCACAAGTGGTTGAGTCCTCGTCAGCAAGAAAGCTTGGAGCAGTTGTGGGCGTATGACAAA
GACTACGGGGCGTTAAAGCTTGCGTGGCTTGCGTATCAGGCGATTATTGATTGTTATCAGATGGGTAATAAGCGTGAAGC
GAAGAAGAAAATGCGGACCATTATTGATCAGCTTCGGGTGTTGAAGGGGCCGAATAAGGAACTCGCGCAGTTGGGTCGTA
GTTTGTTTAAACGACTTGGTGATGTGTTGGCGTATTTCGATGTTGGTGTCTCCAACGGTCCGGTCGAAGCGATCAACGGA
CGGTTGGAGCATTTGCGTGGGATTGCTCTAGGTTTCCGTAATTTGAACCACTACATTCTGCGGTGCCTTATCCATTCAGG
GCAGTTGGTCCATAAGATCAATGCACTCTAA

Upstream 100 bases:

>100_bases
AACCTGGGCTAGCGGTGTAGACCCGAAAATAAACGAGCCTTTTGTCAGGGTTAAGGTTTAGGTATCTAAGCTAACCAAAC
ACCAACAAAAGGCTCTACCC

Downstream 100 bases:

>100_bases
AACAGGAAGAGCCCGCAAACCCAATGGAGCTCAACAAGGGTATTTCTGCAGCTGCAGAAAAGACCTTGGAAGAGTTGAAG
GCACGCGCAACCGAGGTGTC

Product: transposase

Products: NA

Alternate protein names: Transposase Family Protein; Transposase Of; Transposase Subfamily; ISL3 Family Transposase; Transposase And Inactivated Derivatives; ISMsm4 Transposase; Transposase Tnpa Isl3 Family; Transposase TnpA; TnpA Transposase; ISBma1 Transposase

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MKSTGNIIADTICRTAELGLTITGASDAGDYTLIEADALDYTSTCPECSQPGVFRHHTHRMLIDLPIVGFPTKLFIRLPR
YRCTNPTCKQKYFQAELSCADHGKKVTHRVTRWILQRLAIDRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDG
VYVIGVDEHKWSHNRAKHGDGFVTVIVDMTGHRYDSRCPARLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGY
ATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKTLLTTHKWLSPRQQESLEQLWAYDK
DYGALKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRVLKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAING
RLEHLRGIALGFRNLNHYILRCLIHSGQLVHKINAL

Sequences:

>Translated_436_residues
MKSTGNIIADTICRTAELGLTITGASDAGDYTLIEADALDYTSTCPECSQPGVFRHHTHRMLIDLPIVGFPTKLFIRLPR
YRCTNPTCKQKYFQAELSCADHGKKVTHRVTRWILQRLAIDRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDG
VYVIGVDEHKWSHNRAKHGDGFVTVIVDMTGHRYDSRCPARLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGY
ATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKTLLTTHKWLSPRQQESLEQLWAYDK
DYGALKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRVLKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAING
RLEHLRGIALGFRNLNHYILRCLIHSGQLVHKINAL
>Mature_436_residues
MKSTGNIIADTICRTAELGLTITGASDAGDYTLIEADALDYTSTCPECSQPGVFRHHTHRMLIDLPIVGFPTKLFIRLPR
YRCTNPTCKQKYFQAELSCADHGKKVTHRVTRWILQRLAIDRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDG
VYVIGVDEHKWSHNRAKHGDGFVTVIVDMTGHRYDSRCPARLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGY
ATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKTLLTTHKWLSPRQQESLEQLWAYDK
DYGALKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRVLKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAING
RLEHLRGIALGFRNLNHYILRCLIHSGQLVHKINAL

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49602; Mature: 49602

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTGNIIADTICRTAELGLTITGASDAGDYTLIEADALDYTSTCPECSQPGVFRHHTHR
CCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCE
MLIDLPIVGFPTKLFIRLPRYRCTNPTCKQKYFQAELSCADHGKKVTHRVTRWILQRLAI
EEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDGVYVIGVDEHKWSHNRAKHGD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCC
GFVTVIVDMTGHRYDSRCPARLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGY
CEEEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCEEEEEECCCCCC
ATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKTLLTT
HHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
HKWLSPRQQESLEQLWAYDKDYGALKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRV
HHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAINGRLEHLRGIALGFRNLNHYIL
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RCLIHSGQLVHKINAL
HHHHHCCHHHHHHCCC
>Mature Secondary Structure
MKSTGNIIADTICRTAELGLTITGASDAGDYTLIEADALDYTSTCPECSQPGVFRHHTHR
CCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCE
MLIDLPIVGFPTKLFIRLPRYRCTNPTCKQKYFQAELSCADHGKKVTHRVTRWILQRLAI
EEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDGVYVIGVDEHKWSHNRAKHGD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCC
GFVTVIVDMTGHRYDSRCPARLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGY
CEEEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCEEEEEECCCCCC
ATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKTLLTT
HHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
HKWLSPRQQESLEQLWAYDKDYGALKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRV
HHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAINGRLEHLRGIALGFRNLNHYIL
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RCLIHSGQLVHKINAL
HHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA