BacMap

Definition	Corynebacterium glutamicum ATCC 13032, complete genome.
Accession	NC_006958
Length	3,282,708

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The map label for this gene is fabG2 [H]

Identifier: 62389441

GI number: 62389441

Start: 562992

End: 563738

Strand: Reverse

Name: fabG2 [H]

Synonym: cg0641

Alternate gene names: 62389441

Gene position: 563738-562992 (Counterclockwise)

Preceding gene: 62389442

Following gene: 62389440

Centisome position: 17.17

GC content: 55.15

Gene sequence:

>747_bases
ATGCCTAGTCCACGCACTGTTCTTATCACTGGTGCCGCTGGCGGTTTGGGTCGGGCATTCGCTGAAGGTTTCGCAGCCCA
AGGAGACCGTATCGCGGTGGCGGATATCAATCTGGATGGGGCGCAAGAGACCGTTGACAAGCTGAAAGCATTGGGCGCAG
ATGCCGCAGCCTTTGAAGTTGATGTCACGTCTTTGGAGTCCACCGAGGCCCTAGCCGCCGGTGCCGCTGAGTTTGGCGGT
GGCCGAATTGATGTCCTTATTAATAACGCAGCGATATATGCGACAGTGACTCGTTCACCGTTTGAGGATATTGACCCTGC
GGAGTGGGATTTGGTCATGGGAGTCAATCTCAAAGGCCCGTGGTTGGTGACGCGTTCTGTGAGTCCGTTTTTGTCCGATA
ATGCCCGTGTGGTCAATCTTTCCAGCGCGACTGTGTTTTCAGGATCTGCACACTGGGCGCACTACGTGGCATCCAAAGGT
GGGGTCATTGCTTTAACCAGGGTGCTTGCTAAAGAGCTGGGTGGTCGTGGGATCACGGTCAATGCGGTTGCGCCTGGGTT
TACGCTGACTGAAGCCAGCTTGGGACTCATGGATAGCGCGGAAACGTACGGTGTCGATCGCGGATCCATCAAGCGCGCAA
GCCAACCGAAAGACATCGTCGGCACCACCATGTTTCTTGCATCCCCAGAAGCCGAATACATCACTGGGCAAACACTCATC
GTTGATGGTGGCCGACAGTTCATCTAA

Upstream 100 bases:

>100_bases
AAGGGCAAGGTTGTCATTGTTGATCCAGATGCGCCACGCATCGAAGGACCCGGCGCGCACAGCCATGCGCACTCAGTAGC
AGCACATGGGGTGGATACAC

Downstream 100 bases:

>100_bases
GTACTAAAAGTTCTAAGGAGAAGATCATGTCTACTATTCATTTCATTGATCATGCTGGCAAAACCCGCACCATCGAGGCG
ACTGTTGGTGATTCAGTAAT

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPSPRTVLITGAAGGLGRAFAEGFAAQGDRIAVADINLDGAQETVDKLKALGADAAAFEVDVTSLESTEALAAGAAEFGG
GRIDVLINNAAIYATVTRSPFEDIDPAEWDLVMGVNLKGPWLVTRSVSPFLSDNARVVNLSSATVFSGSAHWAHYVASKG
GVIALTRVLAKELGGRGITVNAVAPGFTLTEASLGLMDSAETYGVDRGSIKRASQPKDIVGTTMFLASPEAEYITGQTLI
VDGGRQFI

Sequences:

>Translated_248_residues
MPSPRTVLITGAAGGLGRAFAEGFAAQGDRIAVADINLDGAQETVDKLKALGADAAAFEVDVTSLESTEALAAGAAEFGG
GRIDVLINNAAIYATVTRSPFEDIDPAEWDLVMGVNLKGPWLVTRSVSPFLSDNARVVNLSSATVFSGSAHWAHYVASKG
GVIALTRVLAKELGGRGITVNAVAPGFTLTEASLGLMDSAETYGVDRGSIKRASQPKDIVGTTMFLASPEAEYITGQTLI
VDGGRQFI
>Mature_247_residues
PSPRTVLITGAAGGLGRAFAEGFAAQGDRIAVADINLDGAQETVDKLKALGADAAAFEVDVTSLESTEALAAGAAEFGGG
RIDVLINNAAIYATVTRSPFEDIDPAEWDLVMGVNLKGPWLVTRSVSPFLSDNARVVNLSSATVFSGSAHWAHYVASKGG
VIALTRVLAKELGGRGITVNAVAPGFTLTEASLGLMDSAETYGVDRGSIKRASQPKDIVGTTMFLASPEAEYITGQTLIV
DGGRQFI

Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=33.4677419354839, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=32.6612903225806, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=29.3877551020408, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=31.0483870967742, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=27.3076923076923, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=30.6451612903226, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=31.5789473684211, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=31.0880829015544, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=28.6852589641434, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=28.4, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=28.8793103448276, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=30.2702702702703, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4758504, Length=192, Percent_Identity=32.2916666666667, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI142976729, Length=223, Percent_Identity=27.3542600896861, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI225579078, Length=204, Percent_Identity=30.8823529411765, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=34.8360655737705, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=32.258064516129, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=34.2741935483871, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=31.6602316602317, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1787905, Length=243, Percent_Identity=32.5102880658436, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=28.6885245901639, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=31.3492063492063, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=30.8943089430894, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=26.6129032258064, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=29.3172690763052, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787526, Length=247, Percent_Identity=26.7206477732794, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=26.8292682926829, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786812, Length=262, Percent_Identity=29.0076335877863, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=255, Percent_Identity=32.5490196078431, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=31.1740890688259, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=30.5220883534137, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=28.5171102661597, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30.4, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17568967, Length=200, Percent_Identity=32, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=27.3076923076923, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=27.5862068965517, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=188, Percent_Identity=31.3829787234043, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=27.0161290322581, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=244, Percent_Identity=29.0983606557377, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=30.1115241635688, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=244, Percent_Identity=28.6885245901639, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.4339622641509, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=272, Percent_Identity=27.9411764705882, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=28.7449392712551, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=30.3370786516854, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=28.1954887218045, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=28.6792452830189, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17561272, Length=245, Percent_Identity=28.1632653061224, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=26.171875, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=249, Percent_Identity=26.1044176706827, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=27.9850746268657, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=273, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=279, Percent_Identity=26.8817204301075, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=25.8555133079848, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=26.2962962962963, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=29.4339622641509, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=30.5699481865285, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=27.0588235294118, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=269, Percent_Identity=27.5092936802974, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32563809, Length=193, Percent_Identity=32.1243523316062, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=193, Percent_Identity=32.1243523316062, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=26.9662921348315, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=29.2307692307692, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=25.390625, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=191, Percent_Identity=26.7015706806283, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17558628, Length=248, Percent_Identity=28.2258064516129, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=233, Percent_Identity=31.3304721030043, Blast_Score=90, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=27.0161290322581, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=36.3265306122449, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=33.984375, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=31.25, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=32.6693227091633, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=31.4741035856574, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=26.530612244898, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=30.7377049180328, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=32.0158102766798, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24649181, Length=191, Percent_Identity=31.413612565445, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357673, Length=250, Percent_Identity=28, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI18859837, Length=195, Percent_Identity=29.2307692307692, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI17737361, Length=207, Percent_Identity=30.9178743961353, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45553409, Length=199, Percent_Identity=30.6532663316583, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24647948, Length=199, Percent_Identity=30.6532663316583, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24647946, Length=198, Percent_Identity=30.8080808080808, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581726, Length=192, Percent_Identity=29.6875, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25659; Mature: 25528

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPRTVLITGAAGGLGRAFAEGFAAQGDRIAVADINLDGAQETVDKLKALGADAAAFEV
CCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEE
DVTSLESTEALAAGAAEFGGGRIDVLINNAAIYATVTRSPFEDIDPAEWDLVMGVNLKGP
EECCCCCHHHHHHCHHHHCCCEEEEEEECEEEEEEEECCCCCCCCCCCEEEEEEECCCCC
WLVTRSVSPFLSDNARVVNLSSATVFSGSAHWAHYVASKGGVIALTRVLAKELGGRGITV
EEEEECCCHHHCCCCEEEEECCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE
NAVAPGFTLTEASLGLMDSAETYGVDRGSIKRASQPKDIVGTTMFLASPEAEYITGQTLI
EEECCCEEEEHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHEEEEEEECCCCCEEECCEEE
VDGGRQFI
EECCCCCC
>Mature Secondary Structure 
PSPRTVLITGAAGGLGRAFAEGFAAQGDRIAVADINLDGAQETVDKLKALGADAAAFEV
CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEE
DVTSLESTEALAAGAAEFGGGRIDVLINNAAIYATVTRSPFEDIDPAEWDLVMGVNLKGP
EECCCCCHHHHHHCHHHHCCCEEEEEEECEEEEEEEECCCCCCCCCCCEEEEEEECCCCC
WLVTRSVSPFLSDNARVVNLSSATVFSGSAHWAHYVASKGGVIALTRVLAKELGGRGITV
EEEEECCCHHHCCCCEEEEECCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE
NAVAPGFTLTEASLGLMDSAETYGVDRGSIKRASQPKDIVGTTMFLASPEAEYITGQTLI
EEECCCEEEEHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHEEEEEEECCCCCEEECCEEE
VDGGRQFI
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]