| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is amn [H]
Identifier: 62388990
GI number: 62388990
Start: 103480
End: 104913
Strand: Direct
Name: amn [H]
Synonym: cg0124
Alternate gene names: 62388990
Gene position: 103480-104913 (Clockwise)
Preceding gene: 62388985
Following gene: 62388994
Centisome position: 3.15
GC content: 56.0
Gene sequence:
>1434_bases GTGCAGAAAGATAGTGTGGTGCGCATGGAAGCAACAACGATCGATGACGCAATCGCGAAGCTCATTGACATCTACGACAC CTCGACCAAACTGGCCAAAGAAACCCTCAACAATGAGGACTACGCCGCATACGCCGATGTTGTTTACCCCAAACTCACCG TTGACGTGCTGGAATGGAAACCCATCGACCGCACCGAACCCTTCGGCTATGTGGATCGAGCCGGGCGATACTCCGCCACC TTGTCCAAACCACGCGTGATTGAGCGTTACCTCCGCGAACAACTCGAGCGTCTCACCAGTAATTATCCCTGCAAGATTTA CGTATCTGAGTCAGATATCCGCATCCCACCGGAGTACATTCGCGGCGCACCTTCCGCTACCGAAGCTCGCCGTGCTGGTG ATGTTGCAGATATCATCCCACGCCCCACCCTGGATGAAGTCCACGACGCAATTATCGACGGCGACTGGCACGCCTTCAAC GGCCCCGAACTCCCGCTTTTCCACTTCGGGCCGCAACGCTTCGACATCGCCTGCGCCCGCATCGAGCACTACACCGGCAT CAACGTGGAACACGTGCAGAAGTACATTCTGTTCACCAACTACGCCATGCACACCACCGAGTTCGTGCATTTTGCCATGT CCGAACTCACCTCGGAAGACTCCCGCTACGTGGGTCTATCCTTGCCAAACGGGCAGGTAATTGACCGAGAGACCGCCACC AGCCTCGGTACGGAAACCCTTGATCTGACTAGCCGTTTCCAAATGCCTCGTTACGATCTCATCACCGAAGCCGGTGACGG TATTACCATTATCAACATCGGTGTGGGCCCATCCAATGCAAAAACTATCACCGACTGCCTTGCTGTGCTCCGCCCAGAAG CCTGGGTGATGATCGGCCACTGTGCTGGCATGGACGCCCGCATGCGCATCGGCGACCTCATCCTTGGCAACGCCTACCAG CGCGAAGACCACATTCTGAATACCCGCATCCCACTTGGTAATCCGATCCCGGCAATACCAGAAATCCAAAAAGCTCTAGA AGCCAGCGTCGACGAAATCTACGGATCCGACAACAGCCTCATGCGCACCGGTACGGTCTTATCCACCGACGACCGAAACT GGGAATGGCACACCCCAGAAAACCTCTGGAACTGGCTCAAAGGATCCACCGCCGCAGCTGTTGACATGGAATCTTCCACC TTGGCCACCAACGGATATCGATACCGCATTCCATACGGCACCCTGCTGAGCGTCTCTGACCTGCCACTACACGCAGTGCC GAAACTTCCCGCGCAAGCGCAGGCGTTTTACTCCAACTCCAAGGAAGCCCACGTCATGTGTGCTGTTCGTGCAATGGAAT ACCTGGCAGTAGATCCTGAACGGTTGCGTACCCGTAAACTGCGCAGGACCTTGGGTGAGGTGCCGTTTCGCTAA
Upstream 100 bases:
>100_bases AAGATCAACAACGCCGCCGAGGTCAACTTGGAAATTATCACGTGAGGATTCTTGCATACGCCTATAAAAGCACAGTTTTG AATCCACAGGGCATCAGGGC
Downstream 100 bases:
>100_bases AGTCTCGGAGAGTTAGGCCAGTTGCGCGGCCATTTTTCAGCCGCGTGACGTGTCGCATCGCCGAAACCTTGGCCCACTGA CCTGATCACTCGGTTGAGAG
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MQKDSVVRMEATTIDDAIAKLIDIYDTSTKLAKETLNNEDYAAYADVVYPKLTVDVLEWKPIDRTEPFGYVDRAGRYSAT LSKPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFN GPELPLFHFGPQRFDIACARIEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETAT SLGTETLDLTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARMRIGDLILGNAYQ REDHILNTRIPLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLSTDDRNWEWHTPENLWNWLKGSTAAAVDMESST LATNGYRYRIPYGTLLSVSDLPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR
Sequences:
>Translated_477_residues MQKDSVVRMEATTIDDAIAKLIDIYDTSTKLAKETLNNEDYAAYADVVYPKLTVDVLEWKPIDRTEPFGYVDRAGRYSAT LSKPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFN GPELPLFHFGPQRFDIACARIEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETAT SLGTETLDLTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARMRIGDLILGNAYQ REDHILNTRIPLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLSTDDRNWEWHTPENLWNWLKGSTAAAVDMESST LATNGYRYRIPYGTLLSVSDLPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR >Mature_477_residues MQKDSVVRMEATTIDDAIAKLIDIYDTSTKLAKETLNNEDYAAYADVVYPKLTVDVLEWKPIDRTEPFGYVDRAGRYSAT LSKPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFN GPELPLFHFGPQRFDIACARIEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETAT SLGTETLDLTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARMRIGDLILGNAYQ REDHILNTRIPLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLSTDDRNWEWHTPENLWNWLKGSTAAAVDMESST LATNGYRYRIPYGTLLSVSDLPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=468, Percent_Identity=41.2393162393162, Blast_Score=328, Evalue=6e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 53703; Mature: 53703
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKDSVVRMEATTIDDAIAKLIDIYDTSTKLAKETLNNEDYAAYADVVYPKLTVDVLEWK CCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHCCEEEEEEEECC PIDRTEPFGYVDRAGRYSATLSKPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYI CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH RGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFNGPELPLFHFGPQRFDIACAR CCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHH IEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETAT HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHHH SLGTETLDLTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGH HCCCCHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEE CAGMDARMRIGDLILGNAYQREDHILNTRIPLGNPIPAIPEIQKALEASVDEIYGSDNSL CCCCCCHHHHCCEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE MRTGTVLSTDDRNWEWHTPENLWNWLKGSTAAAVDMESSTLATNGYRYRIPYGTLLSVSD EEECCEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEECCEEEECCCCCEEEECC LPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR CCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQKDSVVRMEATTIDDAIAKLIDIYDTSTKLAKETLNNEDYAAYADVVYPKLTVDVLEWK CCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHCCEEEEEEEECC PIDRTEPFGYVDRAGRYSATLSKPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYI CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH RGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFNGPELPLFHFGPQRFDIACAR CCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHH IEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETAT HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHHH SLGTETLDLTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGH HCCCCHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEE CAGMDARMRIGDLILGNAYQREDHILNTRIPLGNPIPAIPEIQKALEASVDEIYGSDNSL CCCCCCHHHHCCEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE MRTGTVLSTDDRNWEWHTPENLWNWLKGSTAAAVDMESSTLATNGYRYRIPYGTLLSVSD EEECCEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEECCEEEECCCCCEEEECC LPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR CCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]