| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ushA [C]
Identifier: 62388917
GI number: 62388917
Start: 22164
End: 23402
Strand: Direct
Name: ushA [C]
Synonym: cg0035
Alternate gene names: 62388917
Gene position: 22164-23402 (Clockwise)
Preceding gene: 62388916
Following gene: 62388919
Centisome position: 0.68
GC content: 53.43
Gene sequence:
>1239_bases ATGCAGTCTGGAAACTACGGGCACGCACTTGCCGATGTAGATTTCAGCTTCAACCACGACACCGGTGAGCTCACCGTAGA TGATGCCCGCATGCTCGGAGTCGACGATATCAACGCGTGTGAAAACCCAGATGACACCATTGCAGATATTGTTGCTCAGG CGGAACTTGATGCTGGTGAAGCCGGCAAAGAAGTAGTAGCGACCATCGATGGCGATTTTCTCCGCGCCAGCGACGAAGGA GCAGAATCTGGCTCCAACTACGGCGCTGAATCCCAGCTCGTCAACATGATTGCCAGTGCTGTGCGTTGGTCCATGTCCAC CAATACCGCCACCACCGCAGACATTGGGCTTATGAACGCCGGAGGACTCCACACTGACCTATTCAGCGGCGATGTTACCT ACGCCGAAGCTTTTGAAATCCAGCCTTTCTCCGGTGAAGATTCATTTGTCACCCTCAAGGGATCAGACTTCAAAGATGCC CTTGAGCAGCAGTGGGAAGAAGGTTCTGCACGACCAGTGGCAGCACTTGGCGTATCCGACAACGTTTCCTACACCTACGA CATCAACCGTCCAATCGGTGACCGCGTCACTTCCGTGACCATTGATGATACCCCACTTGATCCGGAACGCGACTACGTTG TTGCAGCTTCCCTGTACCTCCAGTCCGGCAACGAAGGTATGACCGCACTGACCCGCGGAACCGCACCTGCACAAACCGGC ATCGTGGATGTACAGTCCACCATCGGATACTTGTCCAACAACAATGTCACCCCACGTACTGGTCAAGCCCAGATTTCCAT CACCCCATCCGGTGAGTTCAATGCGGGTGAAACCATCACCCTTGACATGGCAGGACTCCGCTACACCCAAGGCGACACTG CCACGGAAGTAACTGTCAGCCTTCGAGAAGAAATTGTTTCAGCACCAATTGATCCTCAGCTCGGAGAAGCTGGCTTTGGC GAAGCTGGAACCGCGACAGTGAGCTTGGACATTCCTGCAACCCTTTCAGGTACTCAAAACCTCGTTGTCACCACCGATAC CGGCACCCGTATTTCCATGCCAGTTGAGATTGTTGGCGCAGAACAACCAGCACCGCAACCAGCAGGTTCCTCTGTTTTAG GAACTGGAGTGCTCAGTGGACTCCTCGGCATTGTTGTAGGAATTCTAGGAATGGTCGGTCTGGTGAACTGGATTGACCCA AGCTTCATTCAACAGATCCAGCAGCAAATCTTTGCTTAA
Upstream 100 bases:
>100_bases CATTACCGGCACCGAAGCATGGTCAGAAAATATCGACGTTGTTTTCGCAGGTCACACCCACTAAGTTCGTGATCTAGGAA CCGACAACGGTCCACTAATC
Downstream 100 bases:
>100_bases ATTTAGTAAAAAGCATGCATCTAGCTGCGGATTTTTAAGAAACGTAGCCTGGGTGTAAAATTTAAAGAGCAAGTTTTTAC AACTTGCTCTTTAGCTCGGG
Product: hypothetical protein
Products: Phosphate; Uridine [C]
Alternate protein names: 5-Nucleotidase; 5-Nucleotidase Domain Protein; 5-Nucleotidase Family Protein; Secreted 5-Nucleotidase; Nucleotidase; 5-Nucleotidase-Like; 5-Nucleotidase-Like Protein; 5`-Nucleotidase Family Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; 2 3'-Cyclic-Nucleotide 2'-Phosphodiesterase; 5prime Nucleotidase; UDP-Sugar Diphosphatase; 2 3-Cyclic-Nucleotide 2Phosphodiesterase; 5 -Nucleotidase; 5`-Nucleotidase; 5-Nucleotidase/Ser/Thr Protein Phosphatase; 5-Nucleotidase Protein; 5-Nucleotidase/2' 3'-Cyclic Phosphodiesterase; Extracellular Nuclease; Calcineurin-Like Phosphoesterase; 5-Nucleotidase Protein; 5-Nucleotidase/Phosphoesterase; Protein UshA (Two S-Layer Domains
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MQSGNYGHALADVDFSFNHDTGELTVDDARMLGVDDINACENPDDTIADIVAQAELDAGEAGKEVVATIDGDFLRASDEG AESGSNYGAESQLVNMIASAVRWSMSTNTATTADIGLMNAGGLHTDLFSGDVTYAEAFEIQPFSGEDSFVTLKGSDFKDA LEQQWEEGSARPVAALGVSDNVSYTYDINRPIGDRVTSVTIDDTPLDPERDYVVAASLYLQSGNEGMTALTRGTAPAQTG IVDVQSTIGYLSNNNVTPRTGQAQISITPSGEFNAGETITLDMAGLRYTQGDTATEVTVSLREEIVSAPIDPQLGEAGFG EAGTATVSLDIPATLSGTQNLVVTTDTGTRISMPVEIVGAEQPAPQPAGSSVLGTGVLSGLLGIVVGILGMVGLVNWIDP SFIQQIQQQIFA
Sequences:
>Translated_412_residues MQSGNYGHALADVDFSFNHDTGELTVDDARMLGVDDINACENPDDTIADIVAQAELDAGEAGKEVVATIDGDFLRASDEG AESGSNYGAESQLVNMIASAVRWSMSTNTATTADIGLMNAGGLHTDLFSGDVTYAEAFEIQPFSGEDSFVTLKGSDFKDA LEQQWEEGSARPVAALGVSDNVSYTYDINRPIGDRVTSVTIDDTPLDPERDYVVAASLYLQSGNEGMTALTRGTAPAQTG IVDVQSTIGYLSNNNVTPRTGQAQISITPSGEFNAGETITLDMAGLRYTQGDTATEVTVSLREEIVSAPIDPQLGEAGFG EAGTATVSLDIPATLSGTQNLVVTTDTGTRISMPVEIVGAEQPAPQPAGSSVLGTGVLSGLLGIVVGILGMVGLVNWIDP SFIQQIQQQIFA >Mature_412_residues MQSGNYGHALADVDFSFNHDTGELTVDDARMLGVDDINACENPDDTIADIVAQAELDAGEAGKEVVATIDGDFLRASDEG AESGSNYGAESQLVNMIASAVRWSMSTNTATTADIGLMNAGGLHTDLFSGDVTYAEAFEIQPFSGEDSFVTLKGSDFKDA LEQQWEEGSARPVAALGVSDNVSYTYDINRPIGDRVTSVTIDDTPLDPERDYVVAASLYLQSGNEGMTALTRGTAPAQTG IVDVQSTIGYLSNNNVTPRTGQAQISITPSGEFNAGETITLDMAGLRYTQGDTATEVTVSLREEIVSAPIDPQLGEAGFG EAGTATVSLDIPATLSGTQNLVVTTDTGTRISMPVEIVGAEQPAPQPAGSSVLGTGVLSGLLGIVVGILGMVGLVNWIDP SFIQQIQQQIFA
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24641187, Length=215, Percent_Identity=29.3023255813954, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.45; 3.1.3.5 [C]
Molecular weight: Translated: 43020; Mature: 43020
Theoretical pI: Translated: 3.64; Mature: 3.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSGNYGHALADVDFSFNHDTGELTVDDARMLGVDDINACENPDDTIADIVAQAELDAGE CCCCCCCCEEEEEEEEECCCCCCEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC AGKEVVATIDGDFLRASDEGAESGSNYGAESQLVNMIASAVRWSMSTNTATTADIGLMNA CCCEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC GGLHTDLFSGDVTYAEAFEIQPFSGEDSFVTLKGSDFKDALEQQWEEGSARPVAALGVSD CCCCEECCCCCCEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC NVSYTYDINRPIGDRVTSVTIDDTPLDPERDYVVAASLYLQSGNEGMTALTRGTAPAQTG CCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCC IVDVQSTIGYLSNNNVTPRTGQAQISITPSGEFNAGETITLDMAGLRYTQGDTATEVTVS EEEHHHHHHECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEEEECCCCCCEEHHH LREEIVSAPIDPQLGEAGFGEAGTATVSLDIPATLSGTQNLVVTTDTGTRISMPVEIVGA HHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCEEEEEECCCCEEECCEEEEEC EQPAPQPAGSSVLGTGVLSGLLGIVVGILGMVGLVNWIDPSFIQQIQQQIFA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MQSGNYGHALADVDFSFNHDTGELTVDDARMLGVDDINACENPDDTIADIVAQAELDAGE CCCCCCCCEEEEEEEEECCCCCCEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC AGKEVVATIDGDFLRASDEGAESGSNYGAESQLVNMIASAVRWSMSTNTATTADIGLMNA CCCEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC GGLHTDLFSGDVTYAEAFEIQPFSGEDSFVTLKGSDFKDALEQQWEEGSARPVAALGVSD CCCCEECCCCCCEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC NVSYTYDINRPIGDRVTSVTIDDTPLDPERDYVVAASLYLQSGNEGMTALTRGTAPAQTG CCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCC IVDVQSTIGYLSNNNVTPRTGQAQISITPSGEFNAGETITLDMAGLRYTQGDTATEVTVS EEEHHHHHHECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEEEECCCCCCEEHHH LREEIVSAPIDPQLGEAGFGEAGTATVSLDIPATLSGTQNLVVTTDTGTRISMPVEIVGA HHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCEEEEEECCCCEEECCEEEEEC EQPAPQPAGSSVLGTGVLSGLLGIVVGILGMVGLVNWIDPSFIQQIQQQIFA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; UMP [C]
Specific reaction: H2O + UMP --> Phosphate + Uridine [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: Inhibitor from Salmonella typhimurium cytoplasm [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA