| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185173
Identifier: 62185173
GI number: 62185173
Start: 631498
End: 631965
Strand: Direct
Name: 62185173
Synonym: CAB554
Alternate gene names: NA
Gene position: 631498-631965 (Clockwise)
Preceding gene: 62185165
Following gene: 62185174
Centisome position: 55.18
GC content: 38.46
Gene sequence:
>468_bases ATGTCAAATCCAGTACCTACACACAACAAAACTCTTTCCTCATTCCCTTCAACTATAAGCCTTACTCAGGCAGACAAGAC CCCATCACAACGTTGCTCATCTCTTAGACTGTTTCTAGACACGATGTTAATCATTTTGGGCTTTTCTACCATAGTTACCA TCTTCGCTGCCATTTTTTTTCTTAATGGCCTTAACTTGCTCAACACAACAACAATTATCTTATCTTCAGTTTTGATGCTT ATAGGCATCATATTTATAAGCGTGGGTGTTCTTTTCTTTGTCAATAATATAGAGGATGGACTCTCAGGCATCTTAAGAAA ACATTTAAAAGAGAAAGAGTCGGAAATAGCCGAACTCAAAAGCCAAATCGAAACGTATCAACTTAACCTAGAGTTTTCCG CTTCAGAATCCCCCTCCAACATTATAGAACATTCCGAACCCATAGAGACGAGTTCTGAAGCGATTTGA
Upstream 100 bases:
>100_bases GTGGTTTTCGATGTTCAGGAATGCAGATGATCCGTTGCGATTAAAAAAATTTTTATATATCCTGTTCAACCAAAACTAAT GAACCAATTAGGGATTCGGC
Downstream 100 bases:
>100_bases GGCATGCATGCGATGGGTTCTAGAATCATGGTTAAGGTGGATACATGACTCCACAATGTGAAAAACATGCAAAAAAAAAA ATCCATGGTTTAGATTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSNPVPTHNKTLSSFPSTISLTQADKTPSQRCSSLRLFLDTMLIILGFSTIVTIFAAIFFLNGLNLLNTTTIILSSVLML IGIIFISVGVLFFVNNIEDGLSGILRKHLKEKESEIAELKSQIETYQLNLEFSASESPSNIIEHSEPIETSSEAI
Sequences:
>Translated_155_residues MSNPVPTHNKTLSSFPSTISLTQADKTPSQRCSSLRLFLDTMLIILGFSTIVTIFAAIFFLNGLNLLNTTTIILSSVLML IGIIFISVGVLFFVNNIEDGLSGILRKHLKEKESEIAELKSQIETYQLNLEFSASESPSNIIEHSEPIETSSEAI >Mature_154_residues SNPVPTHNKTLSSFPSTISLTQADKTPSQRCSSLRLFLDTMLIILGFSTIVTIFAAIFFLNGLNLLNTTTIILSSVLMLI GIIFISVGVLFFVNNIEDGLSGILRKHLKEKESEIAELKSQIETYQLNLEFSASESPSNIIEHSEPIETSSEAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17049; Mature: 16918
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPVPTHNKTLSSFPSTISLTQADKTPSQRCSSLRLFLDTMLIILGFSTIVTIFAAIFF CCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGLNLLNTTTIILSSVLMLIGIIFISVGVLFFVNNIEDGLSGILRKHLKEKESEIAELK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQIETYQLNLEFSASESPSNIIEHSEPIETSSEAI HHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SNPVPTHNKTLSSFPSTISLTQADKTPSQRCSSLRLFLDTMLIILGFSTIVTIFAAIFF CCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGLNLLNTTTIILSSVLMLIGIIFISVGVLFFVNNIEDGLSGILRKHLKEKESEIAELK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQIETYQLNLEFSASESPSNIIEHSEPIETSSEAI HHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA