| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185110
Identifier: 62185110
GI number: 62185110
Start: 555105
End: 557237
Strand: Direct
Name: 62185110
Synonym: CAB482
Alternate gene names: NA
Gene position: 555105-557237 (Clockwise)
Preceding gene: 62185109
Following gene: 62185111
Centisome position: 48.51
GC content: 38.12
Gene sequence:
>2133_bases ATGGGATCATCCTTACCTTTCATTTCTTCTAAAAATTTTCATGGAGAATCCGATATAATTCCCGAATTCGGTTGTCCAGC GGCATTCATAAAATTCCTTATTTCCGAGTTAGTCGACCTTGAAGGTCGTTCAGAGATCGCTGAGGGCTATTTATCTTTAT CAGAGAGCCTATTGATGCTTTCCCGAGATCATATAGTGGTCTTAAAAATCATCATTTTCTACGGGATGAAGTATGGAGTG AATAAGAAAAATTCTCGAATTCTAGTCGATGTTTTAGCATACATAGATCTCTTATTTAAAAAATTAGGTATTAGTTCTTC GGATAGACTATCCTTGTGTTCTGCTAAAGTGTGCGCGAATTTTGAGTTATTTTCTTTAACTGGCGACACCAAATTCTTTG ATCAGGTCTTTAAAGATTTTCACGTCCTAGAACAGTTACTTAAGATTCATCCTCATTTGCATGATAGATTAGGTTGGGAG CATTTTCGTCGTGGAGAAAAACACGAAGAAGTTTCTTATTTAGCCACTGCGTATGTATATGAGATTGTAGGAAAATCTTA CTTAACTTTGTATTGTAAAAGCAAAGAAACGGGAGCTCTTATACGAAGCTCACAATGTTTTTCTAAGGTATTAAGTCTAG TTTCAAATCGAGCAAGTGCTCACGCGGATTATGCGGAATGTTTGCAATTTTTCGGTCTAGACTTGGGAAAGTCTTCTTAT ATAGAACAAGCTATAGATCATTTGTCTAAGGCGATTTTTCTTAGCTTTAATCGCCATATGGATAGCGGTGCTCATGAGAA CTATCGCTATAACTATGCTTTAGCAGTCGTCAGATTATTTGATCTAACTTATGAAAAAGAGCATTTCTATCAGGCGAATA GGATATTGTATCAAACGGTGCAAGCCTATCCTCATATTGCTGAGTTGTGGGTGTTATGGGGGGAATTGTTGATTCGTTCC GGTTGGCTTAACAGCAGCATGAAGCACATAGAAATGGGGTTGGATAAGCTGGCATCTGCACAGAAAAAAGGAGCCGACCC GATTATTTTATCATCTCTTCTCGCCAATGGAATAGCCGTCCTTGGGTTGTATTTAGACGAACCAAATCTGTTTAAAGAAA GCCGTACGCGCTTAGTTGCTGCAATGCGAGCTTTCCCTGGGAATAGTCATTTAATTCAAGCGTTAGGGGTGGTGCAGCTT TGTTCAGCTTTATATTTTGGTGATGATGCGAATTTTGCAGCTGCGGCATCTTGTTTTAAATCTTGTATTGAATGGGATGC AGAAAATATCCACGGGTGGCAGAAGCTTTTTGATGTATATTTTGCTTGGGGAGTAAGAAAAAAAAGTGAGAGGTTGTTGC ACAAAGCTGTGGATATTATGAAGAGGTTATGTGCTTTACGCCCCGAAGTGTTTTTATTTTGGAGTGATAGAGGCTTAGCT TTAAAATGTTTAGCTGAAGCAACAACAGATCTTGTTTATAAAGAAATTTATTTAGAAGAATCGTTATTATACTATCGTAA AGCTTGGGATCTTACCCATCGAATAGAAATTTTAGAATTGTGGGGACATTCTTGTTATTTATTAGCATATCTTCAAGAGT CTCTTGAATATTATGATCAGGCTTATACTTTATTATTTGCTATAGATGAAGATAAACGGTCGTTAAGGGCCAAGATCATT ATCGCGTCTACTCTTTTAGGAAAAGGGAAACTATTAGAAGATGAGTCTTTGGTTGAACAGGCTTTAGTTATTTTAAATTC GTTAATAGATGAATGTCCTGATCAAGAAGACTTACTACTCTTATTGGGAGAGGCGTGGCTATTTTTATTTTGGAAACGAC GTTGTTTGGAATCTGAGGAATTAGTTAGGCTATATTTAGAACGGGCAATTGCCTTAGGGTGTAGCGAGGCTTATTACACT CTAGGTAAGTTTTATGCTGTTAAAAAAGAGATAGGTCAGGCTTGGGCCATGGTGATGCGCTCTGTAGATTTTGGTTTTAA AATTACAGAATCGCGGTGGTTAAATGATCCGTGTTTAGCGAATTTGCGCGCGGGGCACGAGTTTCATGAAGTTGTGGCTA ATCAAAGAGGTAAACTATGGTGGGCGAACAAAACAGAGGCGAAGAGAAACTAG
Upstream 100 bases:
>100_bases TATAACTTGGAGTTGTATCCGCTAGGGATAGAAACTCAATCTTTTATGGTATCCTCTAAGTTGTATGAGGAAGAGAATAT GACAGTACAGCAGTCACAAG
Downstream 100 bases:
>100_bases ACGCAGCTCTTGGTTCAGGAAACTTAATGGATTCAAAAACTAGCCATTTGGATGATGAGCTAAGTTTTAAGTTAGAGAAA GCGTTTACCTGTTTATCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MGSSLPFISSKNFHGESDIIPEFGCPAAFIKFLISELVDLEGRSEIAEGYLSLSESLLMLSRDHIVVLKIIIFYGMKYGV NKKNSRILVDVLAYIDLLFKKLGISSSDRLSLCSAKVCANFELFSLTGDTKFFDQVFKDFHVLEQLLKIHPHLHDRLGWE HFRRGEKHEEVSYLATAYVYEIVGKSYLTLYCKSKETGALIRSSQCFSKVLSLVSNRASAHADYAECLQFFGLDLGKSSY IEQAIDHLSKAIFLSFNRHMDSGAHENYRYNYALAVVRLFDLTYEKEHFYQANRILYQTVQAYPHIAELWVLWGELLIRS GWLNSSMKHIEMGLDKLASAQKKGADPIILSSLLANGIAVLGLYLDEPNLFKESRTRLVAAMRAFPGNSHLIQALGVVQL CSALYFGDDANFAAAASCFKSCIEWDAENIHGWQKLFDVYFAWGVRKKSERLLHKAVDIMKRLCALRPEVFLFWSDRGLA LKCLAEATTDLVYKEIYLEESLLYYRKAWDLTHRIEILELWGHSCYLLAYLQESLEYYDQAYTLLFAIDEDKRSLRAKII IASTLLGKGKLLEDESLVEQALVILNSLIDECPDQEDLLLLLGEAWLFLFWKRRCLESEELVRLYLERAIALGCSEAYYT LGKFYAVKKEIGQAWAMVMRSVDFGFKITESRWLNDPCLANLRAGHEFHEVVANQRGKLWWANKTEAKRN
Sequences:
>Translated_710_residues MGSSLPFISSKNFHGESDIIPEFGCPAAFIKFLISELVDLEGRSEIAEGYLSLSESLLMLSRDHIVVLKIIIFYGMKYGV NKKNSRILVDVLAYIDLLFKKLGISSSDRLSLCSAKVCANFELFSLTGDTKFFDQVFKDFHVLEQLLKIHPHLHDRLGWE HFRRGEKHEEVSYLATAYVYEIVGKSYLTLYCKSKETGALIRSSQCFSKVLSLVSNRASAHADYAECLQFFGLDLGKSSY IEQAIDHLSKAIFLSFNRHMDSGAHENYRYNYALAVVRLFDLTYEKEHFYQANRILYQTVQAYPHIAELWVLWGELLIRS GWLNSSMKHIEMGLDKLASAQKKGADPIILSSLLANGIAVLGLYLDEPNLFKESRTRLVAAMRAFPGNSHLIQALGVVQL CSALYFGDDANFAAAASCFKSCIEWDAENIHGWQKLFDVYFAWGVRKKSERLLHKAVDIMKRLCALRPEVFLFWSDRGLA LKCLAEATTDLVYKEIYLEESLLYYRKAWDLTHRIEILELWGHSCYLLAYLQESLEYYDQAYTLLFAIDEDKRSLRAKII IASTLLGKGKLLEDESLVEQALVILNSLIDECPDQEDLLLLLGEAWLFLFWKRRCLESEELVRLYLERAIALGCSEAYYT LGKFYAVKKEIGQAWAMVMRSVDFGFKITESRWLNDPCLANLRAGHEFHEVVANQRGKLWWANKTEAKRN >Mature_709_residues GSSLPFISSKNFHGESDIIPEFGCPAAFIKFLISELVDLEGRSEIAEGYLSLSESLLMLSRDHIVVLKIIIFYGMKYGVN KKNSRILVDVLAYIDLLFKKLGISSSDRLSLCSAKVCANFELFSLTGDTKFFDQVFKDFHVLEQLLKIHPHLHDRLGWEH FRRGEKHEEVSYLATAYVYEIVGKSYLTLYCKSKETGALIRSSQCFSKVLSLVSNRASAHADYAECLQFFGLDLGKSSYI EQAIDHLSKAIFLSFNRHMDSGAHENYRYNYALAVVRLFDLTYEKEHFYQANRILYQTVQAYPHIAELWVLWGELLIRSG WLNSSMKHIEMGLDKLASAQKKGADPIILSSLLANGIAVLGLYLDEPNLFKESRTRLVAAMRAFPGNSHLIQALGVVQLC SALYFGDDANFAAAASCFKSCIEWDAENIHGWQKLFDVYFAWGVRKKSERLLHKAVDIMKRLCALRPEVFLFWSDRGLAL KCLAEATTDLVYKEIYLEESLLYYRKAWDLTHRIEILELWGHSCYLLAYLQESLEYYDQAYTLLFAIDEDKRSLRAKIII ASTLLGKGKLLEDESLVEQALVILNSLIDECPDQEDLLLLLGEAWLFLFWKRRCLESEELVRLYLERAIALGCSEAYYTL GKFYAVKKEIGQAWAMVMRSVDFGFKITESRWLNDPCLANLRAGHEFHEVVANQRGKLWWANKTEAKRN
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81391; Mature: 81260
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSLPFISSKNFHGESDIIPEFGCPAAFIKFLISELVDLEGRSEIAEGYLSLSESLLML CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SRDHIVVLKIIIFYGMKYGVNKKNSRILVDVLAYIDLLFKKLGISSSDRLSLCSAKVCAN CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC FELFSLTGDTKFFDQVFKDFHVLEQLLKIHPHLHDRLGWEHFRRGEKHEEVSYLATAYVY EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHH EIVGKSYLTLYCKSKETGALIRSSQCFSKVLSLVSNRASAHADYAECLQFFGLDLGKSSY HHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH IEQAIDHLSKAIFLSFNRHMDSGAHENYRYNYALAVVRLFDLTYEKEHFYQANRILYQTV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAYPHIAELWVLWGELLIRSGWLNSSMKHIEMGLDKLASAQKKGADPIILSSLLANGIAV HHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHE LGLYLDEPNLFKESRTRLVAAMRAFPGNSHLIQALGVVQLCSALYFGDDANFAAAASCFK EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SCIEWDAENIHGWQKLFDVYFAWGVRKKSERLLHKAVDIMKRLCALRPEVFLFWSDRGLA HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH LKCLAEATTDLVYKEIYLEESLLYYRKAWDLTHRIEILELWGHSCYLLAYLQESLEYYDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AYTLLFAIDEDKRSLRAKIIIASTLLGKGKLLEDESLVEQALVILNSLIDECPDQEDLLL HEEEEEEECCCHHHHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH LLGEAWLFLFWKRRCLESEELVRLYLERAIALGCSEAYYTLGKFYAVKKEIGQAWAMVMR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVDFGFKITESRWLNDPCLANLRAGHEFHEVVANQRGKLWWANKTEAKRN HHCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCCC >Mature Secondary Structure GSSLPFISSKNFHGESDIIPEFGCPAAFIKFLISELVDLEGRSEIAEGYLSLSESLLML CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SRDHIVVLKIIIFYGMKYGVNKKNSRILVDVLAYIDLLFKKLGISSSDRLSLCSAKVCAN CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC FELFSLTGDTKFFDQVFKDFHVLEQLLKIHPHLHDRLGWEHFRRGEKHEEVSYLATAYVY EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHH EIVGKSYLTLYCKSKETGALIRSSQCFSKVLSLVSNRASAHADYAECLQFFGLDLGKSSY HHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH IEQAIDHLSKAIFLSFNRHMDSGAHENYRYNYALAVVRLFDLTYEKEHFYQANRILYQTV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAYPHIAELWVLWGELLIRSGWLNSSMKHIEMGLDKLASAQKKGADPIILSSLLANGIAV HHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHE LGLYLDEPNLFKESRTRLVAAMRAFPGNSHLIQALGVVQLCSALYFGDDANFAAAASCFK EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SCIEWDAENIHGWQKLFDVYFAWGVRKKSERLLHKAVDIMKRLCALRPEVFLFWSDRGLA HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH LKCLAEATTDLVYKEIYLEESLLYYRKAWDLTHRIEILELWGHSCYLLAYLQESLEYYDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AYTLLFAIDEDKRSLRAKIIIASTLLGKGKLLEDESLVEQALVILNSLIDECPDQEDLLL HEEEEEEECCCHHHHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH LLGEAWLFLFWKRRCLESEELVRLYLERAIALGCSEAYYTLGKFYAVKKEIGQAWAMVMR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVDFGFKITESRWLNDPCLANLRAGHEFHEVVANQRGKLWWANKTEAKRN HHCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA