| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185109
Identifier: 62185109
GI number: 62185109
Start: 553665
End: 554843
Strand: Direct
Name: 62185109
Synonym: CAB481
Alternate gene names: NA
Gene position: 553665-554843 (Clockwise)
Preceding gene: 62185102
Following gene: 62185110
Centisome position: 48.38
GC content: 38.68
Gene sequence:
>1179_bases ATGTCGTGTTTTAATTTGCCTTCAGTTAACCAAAGATTATCTCCTGTTGGACCTGACCATTTTCCGAACGAAACAAGTTG GAAAAATGTGTTTGAGTCCAAGATTATCAAAAACTCTCGCACTCATTTGGAATTAGAGAGATATCAGGCAAATCGCCAAA CACGTGTTGCCGTCATTGCTTTATGCGTGCTGATCACTTTAGTTTTATTAGCTATGCTTCTTGGAACTTTACAAATCCAA GCTTTTGTCATGACATGGGTTTCGGTTGTTGTGGCTGTAGCGATTCCTACTATTTTACTTACAGGTGGAATGTATGTCTT GTATAGGATTAGCAAGAAAGTCGATGTGCTTTCAGGATCAGTGATCAAACCTTTTGGGAATAGGGTTTGGGCTCCCATGC CAATATGTCACTATTATAAACCTAAAGCTGAGCAAAAAGAACGCGTTCAAGAAAGAATTCAAGAAACTCATATAGATTTG TCCACTTTGGATGAAAATGGTTCTGGAGTGGCATTGGTATATTTTTATCCGGATGGTATAGATTATAGAATCCCAACCTT TGTCTTTCCTTTAATAGCGGCTCCTTTTCTTGTTCTGATCAAAATGGTCTATAATTTGATCAGATTTATAGTGATTCCTT TTTATATACTTTTCCAGATGGTCTTGCAGTGTTTTTCAAAAGCAGATGTCTCTAAAGAAGATCGTTTTATTTTCAAGGAT ATAGTTCGAGAAATGTCTAGATCTCTTGTGAATTTTCTGAAGGCTCCTTTTTATGGCACAGCTTCAATGATGGCAGTCTT TTATGGTTTGTTGAATCCTCTAGGAGGGCGAGTGGCCTATAGTTGTGTTGAAAGAGCTTGGAATGATGATGTGATTCGTT CTCGTGGCTGGTGGTTGGCAGTTCCTCAACGTAATTTTCAATTTGAAGGAGGAGGTACACGACAAGGATTAGGACAATTC AGTTATTACTTAATTGGATGTTTTCAACCTATTGGGATGTTTTTATTTAGACAAGGACAGATTGTGTCAGGTGCTCATAC GTCGGTGCAGTACTATCCTAAAGAGAATCTACCTATTTATCCAGGAATAGCTGTCGTTCCTGCTCCTGAAGTTGAAACAG GTCATGATGAAGGGGAATCGGTCGATACTGGGAATGTAGAGTTAGAAGAATTGGTCTAG
Upstream 100 bases:
>100_bases GGCACTAAAAAATTTTTAATAAAAGTGAAATGAGAGTATAGTGATTCGGGAATTTCTTTTCTTTGAAATAAAATAAAATA AAACTTTTTTAAAGTGCAGC
Downstream 100 bases:
>100_bases TCAGTTTTCTTGTAAACTCCCATCTAAAATATTTTTGATGAAAAACTTAAATGCGTTAAACTAGCCTCAAAGTTTTTCTG TCGGACACTTTTACGTTTAC
Product: putative inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSCFNLPSVNQRLSPVGPDHFPNETSWKNVFESKIIKNSRTHLELERYQANRQTRVAVIALCVLITLVLLAMLLGTLQIQ AFVMTWVSVVVAVAIPTILLTGGMYVLYRISKKVDVLSGSVIKPFGNRVWAPMPICHYYKPKAEQKERVQERIQETHIDL STLDENGSGVALVYFYPDGIDYRIPTFVFPLIAAPFLVLIKMVYNLIRFIVIPFYILFQMVLQCFSKADVSKEDRFIFKD IVREMSRSLVNFLKAPFYGTASMMAVFYGLLNPLGGRVAYSCVERAWNDDVIRSRGWWLAVPQRNFQFEGGGTRQGLGQF SYYLIGCFQPIGMFLFRQGQIVSGAHTSVQYYPKENLPIYPGIAVVPAPEVETGHDEGESVDTGNVELEELV
Sequences:
>Translated_392_residues MSCFNLPSVNQRLSPVGPDHFPNETSWKNVFESKIIKNSRTHLELERYQANRQTRVAVIALCVLITLVLLAMLLGTLQIQ AFVMTWVSVVVAVAIPTILLTGGMYVLYRISKKVDVLSGSVIKPFGNRVWAPMPICHYYKPKAEQKERVQERIQETHIDL STLDENGSGVALVYFYPDGIDYRIPTFVFPLIAAPFLVLIKMVYNLIRFIVIPFYILFQMVLQCFSKADVSKEDRFIFKD IVREMSRSLVNFLKAPFYGTASMMAVFYGLLNPLGGRVAYSCVERAWNDDVIRSRGWWLAVPQRNFQFEGGGTRQGLGQF SYYLIGCFQPIGMFLFRQGQIVSGAHTSVQYYPKENLPIYPGIAVVPAPEVETGHDEGESVDTGNVELEELV >Mature_391_residues SCFNLPSVNQRLSPVGPDHFPNETSWKNVFESKIIKNSRTHLELERYQANRQTRVAVIALCVLITLVLLAMLLGTLQIQA FVMTWVSVVVAVAIPTILLTGGMYVLYRISKKVDVLSGSVIKPFGNRVWAPMPICHYYKPKAEQKERVQERIQETHIDLS TLDENGSGVALVYFYPDGIDYRIPTFVFPLIAAPFLVLIKMVYNLIRFIVIPFYILFQMVLQCFSKADVSKEDRFIFKDI VREMSRSLVNFLKAPFYGTASMMAVFYGLLNPLGGRVAYSCVERAWNDDVIRSRGWWLAVPQRNFQFEGGGTRQGLGQFS YYLIGCFQPIGMFLFRQGQIVSGAHTSVQYYPKENLPIYPGIAVVPAPEVETGHDEGESVDTGNVELEELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44395; Mature: 44264
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCFNLPSVNQRLSPVGPDHFPNETSWKNVFESKIIKNSRTHLELERYQANRQTRVAVIA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH LCVLITLVLLAMLLGTLQIQAFVMTWVSVVVAVAIPTILLTGGMYVLYRISKKVDVLSGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCC VIKPFGNRVWAPMPICHYYKPKAEQKERVQERIQETHIDLSTLDENGSGVALVYFYPDGI CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCC DYRIPTFVFPLIAAPFLVLIKMVYNLIRFIVIPFYILFQMVLQCFSKADVSKEDRFIFKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IVREMSRSLVNFLKAPFYGTASMMAVFYGLLNPLGGRVAYSCVERAWNDDVIRSRGWWLA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEE VPQRNFQFEGGGTRQGLGQFSYYLIGCFQPIGMFLFRQGQIVSGAHTSVQYYPKENLPIY ECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEECCCCCCCCC PGIAVVPAPEVETGHDEGESVDTGNVELEELV CCEEEECCCCCCCCCCCCCCCCCCCEEHHHCC >Mature Secondary Structure SCFNLPSVNQRLSPVGPDHFPNETSWKNVFESKIIKNSRTHLELERYQANRQTRVAVIA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH LCVLITLVLLAMLLGTLQIQAFVMTWVSVVVAVAIPTILLTGGMYVLYRISKKVDVLSGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCC VIKPFGNRVWAPMPICHYYKPKAEQKERVQERIQETHIDLSTLDENGSGVALVYFYPDGI CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCC DYRIPTFVFPLIAAPFLVLIKMVYNLIRFIVIPFYILFQMVLQCFSKADVSKEDRFIFKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IVREMSRSLVNFLKAPFYGTASMMAVFYGLLNPLGGRVAYSCVERAWNDDVIRSRGWWLA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEE VPQRNFQFEGGGTRQGLGQFSYYLIGCFQPIGMFLFRQGQIVSGAHTSVQYYPKENLPIY ECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEECCCCCCCCC PGIAVVPAPEVETGHDEGESVDTGNVELEELV CCEEEECCCCCCCCCCCCCCCCCCCEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA