| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185094
Identifier: 62185094
GI number: 62185094
Start: 537028
End: 538059
Strand: Direct
Name: 62185094
Synonym: CAB465
Alternate gene names: NA
Gene position: 537028-538059 (Clockwise)
Preceding gene: 62185090
Following gene: 62185099
Centisome position: 46.93
GC content: 35.17
Gene sequence:
>1032_bases ATGGACGTTTTTAGCAGACTAAATCGTCAGAATCATTTTTATGTGGAACAGATAGATGGTGTCATGAGAGATCCAAATTC TCCCACTGACAACAACAAGAATAAAGATAATGAACTCAAGAAAAAATTATTAACTATAACTAAAAGGGTAGTTGCCTCGG CTCAAGAATTTCAACATGGGAGAGAAAGTGCTAGTAACTATTTAAAAAAAACTCAATGGATGCCCTATAAAAACGAGGAG TTAGAGGAAACAAAAGAGCTATTTTCTTTACTTACTTCCATGGATAAGAAGTTAGCTCAATTATTTTTTTATCTTCCCTC TTGTGGAATAGAGTGGGGGGATTTTGTGACTTCAGTTGAACAGATAGAACAGAACTACGGTTTAGGTGGAATATTATTTT CTTGTGGTTCTTTTGAAAAGCAATGTAGGTATATTCGTGATTTCAACAAGTCTCAGATCATGCATTTACTTTTGGGATGT ACTGTTCCTCACAGCTTAGAATTTTACTTATTGGAGCGGGATTTATCTTTAATGGACTGCAAAAATCTGTATGAGCTAGG CATTGGCTTAGGAGAGCTACTTAAAGATTATGGGGTGATGATTTCCTTAATCTTTCAAGAAATAGCTAGTATGGATATGT CCAACTATTCTGAATTGCTGAGGGGACTAAAATATTCAGGTAACATACAAGGAAAACTACATCACTGTGATAGTTCTCCT ACAACAATCACCCCGAGTCCTATAGCTTTGCGTTATAGCTTAGCAAACACCATACGAGGTTTAGCTATTGACGTAGACTT CTCAAGATTGAAATTTATGGGATGTTCTATGTTAACGAATGTGGAGAACACAATAAAAGCATTAAATCACGGAGTCGAGT GTTTCACTTTTTCTAATCTTAAAGAGTTTAAGAAGGGAATTAAGGTACTCACTCAATTAATTAGTACAGGTCAAGTTAGT CCGGCAATTGTCAATAAAAGCGTGATCAAAATTCTCACCTTGAAAAGACGCTTTAAATCTATACGTTTATAA
Upstream 100 bases:
>100_bases GACAAGACCAAAAAAGTAATTAAGTTTTTTAAAAAAAGAAAAATCTTTAATATCTCCCCATTTGTGTATTTCTGACCAAG AAGTAAAGGATCGTGGACAC
Downstream 100 bases:
>100_bases CTTTATTAGGGGGTTATTTGTAATTCTGTAGATTGTGCAGATAATCCCTTAACCTTTTCTTCTAACATTCCTAAACGTTC TTCTAATTTAGGTAGACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MDVFSRLNRQNHFYVEQIDGVMRDPNSPTDNNKNKDNELKKKLLTITKRVVASAQEFQHGRESASNYLKKTQWMPYKNEE LEETKELFSLLTSMDKKLAQLFFYLPSCGIEWGDFVTSVEQIEQNYGLGGILFSCGSFEKQCRYIRDFNKSQIMHLLLGC TVPHSLEFYLLERDLSLMDCKNLYELGIGLGELLKDYGVMISLIFQEIASMDMSNYSELLRGLKYSGNIQGKLHHCDSSP TTITPSPIALRYSLANTIRGLAIDVDFSRLKFMGCSMLTNVENTIKALNHGVECFTFSNLKEFKKGIKVLTQLISTGQVS PAIVNKSVIKILTLKRRFKSIRL
Sequences:
>Translated_343_residues MDVFSRLNRQNHFYVEQIDGVMRDPNSPTDNNKNKDNELKKKLLTITKRVVASAQEFQHGRESASNYLKKTQWMPYKNEE LEETKELFSLLTSMDKKLAQLFFYLPSCGIEWGDFVTSVEQIEQNYGLGGILFSCGSFEKQCRYIRDFNKSQIMHLLLGC TVPHSLEFYLLERDLSLMDCKNLYELGIGLGELLKDYGVMISLIFQEIASMDMSNYSELLRGLKYSGNIQGKLHHCDSSP TTITPSPIALRYSLANTIRGLAIDVDFSRLKFMGCSMLTNVENTIKALNHGVECFTFSNLKEFKKGIKVLTQLISTGQVS PAIVNKSVIKILTLKRRFKSIRL >Mature_343_residues MDVFSRLNRQNHFYVEQIDGVMRDPNSPTDNNKNKDNELKKKLLTITKRVVASAQEFQHGRESASNYLKKTQWMPYKNEE LEETKELFSLLTSMDKKLAQLFFYLPSCGIEWGDFVTSVEQIEQNYGLGGILFSCGSFEKQCRYIRDFNKSQIMHLLLGC TVPHSLEFYLLERDLSLMDCKNLYELGIGLGELLKDYGVMISLIFQEIASMDMSNYSELLRGLKYSGNIQGKLHHCDSSP TTITPSPIALRYSLANTIRGLAIDVDFSRLKFMGCSMLTNVENTIKALNHGVECFTFSNLKEFKKGIKVLTQLISTGQVS PAIVNKSVIKILTLKRRFKSIRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39184; Mature: 39184
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVFSRLNRQNHFYVEQIDGVMRDPNSPTDNNKNKDNELKKKLLTITKRVVASAQEFQHG CCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RESASNYLKKTQWMPYKNEELEETKELFSLLTSMDKKLAQLFFYLPSCGIEWGDFVTSVE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QIEQNYGLGGILFSCGSFEKQCRYIRDFNKSQIMHLLLGCTVPHSLEFYLLERDLSLMDC HHHHHCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEECCCCHHHHH KNLYELGIGLGELLKDYGVMISLIFQEIASMDMSNYSELLRGLKYSGNIQGKLHHCDSSP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCC TTITPSPIALRYSLANTIRGLAIDVDFSRLKFMGCSMLTNVENTIKALNHGVECFTFSNL CEECCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH KEFKKGIKVLTQLISTGQVSPAIVNKSVIKILTLKRRFKSIRL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVFSRLNRQNHFYVEQIDGVMRDPNSPTDNNKNKDNELKKKLLTITKRVVASAQEFQHG CCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RESASNYLKKTQWMPYKNEELEETKELFSLLTSMDKKLAQLFFYLPSCGIEWGDFVTSVE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QIEQNYGLGGILFSCGSFEKQCRYIRDFNKSQIMHLLLGCTVPHSLEFYLLERDLSLMDC HHHHHCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEECCCCHHHHH KNLYELGIGLGELLKDYGVMISLIFQEIASMDMSNYSELLRGLKYSGNIQGKLHHCDSSP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCC TTITPSPIALRYSLANTIRGLAIDVDFSRLKFMGCSMLTNVENTIKALNHGVECFTFSNL CEECCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH KEFKKGIKVLTQLISTGQVSPAIVNKSVIKILTLKRRFKSIRL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA