| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is engD [H]
Identifier: 62185076
GI number: 62185076
Start: 514765
End: 515859
Strand: Direct
Name: engD [H]
Synonym: CAB447
Alternate gene names: 62185076
Gene position: 514765-515859 (Clockwise)
Preceding gene: 62185067
Following gene: 62185083
Centisome position: 44.98
GC content: 40.91
Gene sequence:
>1095_bases ATGGGGCATACAGAATGTGGCATTGTAGGACTTCCCAATGTAGGTAAGTCTGGGTTATTTAATGCTCTTACTGGAGCGCA AGTAGCTTCTTGTAACTATCCCTTTTGCACAATTGACCCGAACATTGGTATTGTTCCGGTTATAGATAACCGTCTAGATA TTTTAGCTAAGATGAGTCAGAGTCAGAAGGTGATCTATGCCGATATGAAATTTGTTGATATTGCTGGTTTGGTGAAGGGA GCTGCAGACGGAGCAGGATTAGGAAATCGGTTTCTCTCTCATATCCGTGAGACTCATGCTGTGGCTCATGTTGTTCGTTG TTTTGACAATGATGATGTGACGCATGTATCGGGAAAGATAGATCCCAGTGATGACATTTCTGTGATAAATTTAGAATTGA TCTTTTCTGATTTTTCTTCGGCAACAAATATTCATAGCAAATTAGAGAAACAAGCGAAGGGCAAGAAAGACCTTGGGATG GTTTTACCTTTACTTGATAGAGTGATTAAACATTTAGAAAGTGGTCAACCCGTTCGTACTTTACATTTATCTTCTGAAGA GCAGATACAACTCAAACCTTATCCCTTTTTAACAGCAAAACCTATGTTGTATGTAGCGAACATAGGCGAGGATTCCATAG CCACTATGCATAACGATTATGTTGCTGTTGTTCAAGAAATTGCGAAAAAAGAAAATGCTCCTGTCGTTCCTATTTGTGTA CAGTTAGAAGAAGAAATCATTTCGCTTCCTGTAGAAGAACGGCAAGACTTTTTAAATAGTTTGGGGCTAAAAGAATCGGG ATTACATCGGTTAGTTCGTGCTGCTTACCATACACTTGGATTGATTTCTTATTTTACAACTGGACCACAAGAAACCCGAG CTTGGACTATTCCTATAGGATCTACAGCTGCGGAAGCTGCAGGCCAAATTCACACCGATATCCAAAAAGGGTTTATCCGA GCGGAAGTCGTTACTCTTGAAGACATGATCACCTATGGAAGCCGTACAGGAGTCCGCGAAGCCGGCAAATTGCGAGCAGA GGGTAGAGACTACATTGTGCAGGATGGCGATATTATGCTTTTCTTGCATAATTAG
Upstream 100 bases:
>100_bases CGAATGCAAGCTCCCACAAGCATCGAATCAACGATTCTTATGTTTGTGGGAATTCTTCCCTAGTAAAGGTAATATTAAAA ATAGCTACGAAAGATAACAT
Downstream 100 bases:
>100_bases TAGAGAAGAAAGCTTTTGCGCTGTCTATGTCCTTTCGAATTGCTTGAGACAACATCTCTCGAGAAGGGAATTTTCTTTCT TTGCGGATAAATTTCTTAGG
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGHTECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDNRLDILAKMSQSQKVIYADMKFVDIAGLVKG AADGAGLGNRFLSHIRETHAVAHVVRCFDNDDVTHVSGKIDPSDDISVINLELIFSDFSSATNIHSKLEKQAKGKKDLGM VLPLLDRVIKHLESGQPVRTLHLSSEEQIQLKPYPFLTAKPMLYVANIGEDSIATMHNDYVAVVQEIAKKENAPVVPICV QLEEEIISLPVEERQDFLNSLGLKESGLHRLVRAAYHTLGLISYFTTGPQETRAWTIPIGSTAAEAAGQIHTDIQKGFIR AEVVTLEDMITYGSRTGVREAGKLRAEGRDYIVQDGDIMLFLHN
Sequences:
>Translated_364_residues MGHTECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDNRLDILAKMSQSQKVIYADMKFVDIAGLVKG AADGAGLGNRFLSHIRETHAVAHVVRCFDNDDVTHVSGKIDPSDDISVINLELIFSDFSSATNIHSKLEKQAKGKKDLGM VLPLLDRVIKHLESGQPVRTLHLSSEEQIQLKPYPFLTAKPMLYVANIGEDSIATMHNDYVAVVQEIAKKENAPVVPICV QLEEEIISLPVEERQDFLNSLGLKESGLHRLVRAAYHTLGLISYFTTGPQETRAWTIPIGSTAAEAAGQIHTDIQKGFIR AEVVTLEDMITYGSRTGVREAGKLRAEGRDYIVQDGDIMLFLHN >Mature_363_residues GHTECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDNRLDILAKMSQSQKVIYADMKFVDIAGLVKGA ADGAGLGNRFLSHIRETHAVAHVVRCFDNDDVTHVSGKIDPSDDISVINLELIFSDFSSATNIHSKLEKQAKGKKDLGMV LPLLDRVIKHLESGQPVRTLHLSSEEQIQLKPYPFLTAKPMLYVANIGEDSIATMHNDYVAVVQEIAKKENAPVVPICVQ LEEEIISLPVEERQDFLNSLGLKESGLHRLVRAAYHTLGLISYFTTGPQETRAWTIPIGSTAAEAAGQIHTDIQKGFIRA EVVTLEDMITYGSRTGVREAGKLRAEGRDYIVQDGDIMLFLHN
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=366, Percent_Identity=43.9890710382514, Blast_Score=294, Evalue=9e-80, Organism=Homo sapiens, GI58761502, Length=196, Percent_Identity=40.8163265306122, Blast_Score=156, Evalue=3e-38, Organism=Escherichia coli, GI1787454, Length=361, Percent_Identity=53.4626038781163, Blast_Score=410, Evalue=1e-116, Organism=Escherichia coli, GI1789574, Length=129, Percent_Identity=32.5581395348837, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17509631, Length=365, Percent_Identity=41.0958904109589, Blast_Score=275, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6319499, Length=367, Percent_Identity=38.9645776566758, Blast_Score=240, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6321773, Length=381, Percent_Identity=33.5958005249344, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321649, Length=140, Percent_Identity=37.8571428571429, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640873, Length=366, Percent_Identity=39.8907103825137, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24640877, Length=366, Percent_Identity=39.8907103825137, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24640875, Length=366, Percent_Identity=39.8907103825137, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24640879, Length=328, Percent_Identity=37.8048780487805, Blast_Score=212, Evalue=3e-55,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39783; Mature: 39652
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHTECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDNRLDILAKMSQ CCCCCCCEEECCCCCCCHHHHHHCCCEEEECCCCEEEECCCCCEEEEECCHHHHHHHHCC SQKVIYADMKFVDIAGLVKGAADGAGLGNRFLSHIRETHAVAHVVRCFDNDDVTHVSGKI CCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC DPSDDISVINLELIFSDFSSATNIHSKLEKQAKGKKDLGMVLPLLDRVIKHLESGQPVRT CCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEE LHLSSEEQIQLKPYPFLTAKPMLYVANIGEDSIATMHNDYVAVVQEIAKKENAPVVPICV EECCCCCCEEECCCCCEECCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEH QLEEEIISLPVEERQDFLNSLGLKESGLHRLVRAAYHTLGLISYFTTGPQETRAWTIPIG HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC STAAEAAGQIHTDIQKGFIRAEVVTLEDMITYGSRTGVREAGKLRAEGRDYIVQDGDIML CHHHHHHHHHHHHHHHCHHHHEEEEHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCEEE FLHN EEEC >Mature Secondary Structure GHTECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDNRLDILAKMSQ CCCCCCEEECCCCCCCHHHHHHCCCEEEECCCCEEEECCCCCEEEEECCHHHHHHHHCC SQKVIYADMKFVDIAGLVKGAADGAGLGNRFLSHIRETHAVAHVVRCFDNDDVTHVSGKI CCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC DPSDDISVINLELIFSDFSSATNIHSKLEKQAKGKKDLGMVLPLLDRVIKHLESGQPVRT CCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEE LHLSSEEQIQLKPYPFLTAKPMLYVANIGEDSIATMHNDYVAVVQEIAKKENAPVVPICV EECCCCCCEEECCCCCEECCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEH QLEEEIISLPVEERQDFLNSLGLKESGLHRLVRAAYHTLGLISYFTTGPQETRAWTIPIG HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC STAAEAAGQIHTDIQKGFIRAEVVTLEDMITYGSRTGVREAGKLRAEGRDYIVQDGDIML CHHHHHHHHHHHHHHHCHHHHEEEEHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCEEE FLHN EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]