| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is yaeL [C]
Identifier: 62185057
GI number: 62185057
Start: 493376
End: 495244
Strand: Direct
Name: yaeL [C]
Synonym: CAB428
Alternate gene names: 62185057
Gene position: 493376-495244 (Clockwise)
Preceding gene: 62185056
Following gene: 62185061
Centisome position: 43.11
GC content: 39.33
Gene sequence:
>1869_bases ATGACAATAATATATTTCATTCTTGCAGCCCTTGCTTTGGGGGTTTTAGTATTGGTTCATGAATTGGGTCATTTACTGGC AGCCAAGTCTGTAGGCATGGCTGTGGAGAGTTTTAGTATTGGTTTTGGTCCAACTTTATATAAAAAGAAGATTGGCAATA TAGAGTATCGTATAGGTATTTTCCCATTTGGGGGATATGTCCGAATTAAAGGCATGGACAAGAGAGAAAAAGGTGTAGAT GTAGACCCTGATTCCGTTTATGACATACCTCAAGGTTTTTTCAGTAAATCTCCATGGAAAAGAATCTTCGTTCTTGCTGC TGGTCCTATAGCTAATGTTTTGTTAGCTTTTGTAGCTTTTGGTGCCTTATATATTTCTGGAGGAAGAAGTAAAGCATACT CTGAGTATTCTCGTATTGTGGGCTGGGTAAATCCTATTTTAAAAGAGAAAGGTTTGGCTCTTGGCGACGAGATCCTTACG TGTAATGGTAAGCCTTATTACTCAGATAAAGATGCAATTACTTCCGCTTTATTAGACGGGCGTTTGTCATTTACGGGAGT GCACCCTGGATATCTTTCGGAAACTTCTAGTGATTTTGCCTTCAATACAGAATTCGATGTTAATAAAAATGGTATTCCTC TAGCAGGAGCTAGCTATCTTTTATACCGTCATCAGGAGCCGATTTCCAAGGAATCTCCTCTGTATTCAGCGAATATACTT CCAGGTGATCGCTTAGTGTGGATGGATGGGCAAATCCTGTTTTCTCCAATGCAGGTTTCACAGATACTGAATGAGGCTTA TGCTTTTGTTAAGGTTTCTCGTCACAATAAGGAATTTTCGGTACGTATTCCGAGAATATTAGTGAGTACACTGTACCTTT CTCCTTATGTCAGGAATGAACTTATCGATAATCAGTATGAGGCTGGGATTAAGGGGAAATGGTCTTCTTTATATACTTTA CCGTATGTGATTAATAGCTACGGCTATGTAGAAGGGGAATTACAACCGATCGATCCAGAGTCTCCATTTCCTTCTATGGA AGAAAAACTGGAATTGGGGGATCGAATTATTGCGATAGACGGTACTCCCGTTAGTGGAAGCACGGACATTTTACGTTTAG TTCAGAATCATAAGGTATCGATTATTGTTCAGAAAATGACTCCTGAGCAATTAGAGGATGTGGATTCCTCCCTTGCTGAT AAGCGATTTATTCATTCCTACAATGCTCAAGATTTATTAGCGATTATTCATTCTATAGGGAGTACTCAAGAAGTACGCGA ATCAGGACAATATCGGTTATTGCCTCCCGTGCATCCTAAGCCTTGGGTGAGCATTTATTCCGACGATCTTTTGAATAAGC GTCGTGAAATGGCGAAGAGATTCAAAAATCAAGATCAGCAGCGGTACTATCTCGATAGAATAGAAATAGAAAAACAAAGG TTATCTTTAGGGATTCCTTTAAGGGATATGACTGTGAAGTATAATCCTAGACCGGATGTCTTAATTGCGCATATTGCTAA GGATAGTCTGCGTACTATGAAAGCATTAGTTGTAGGCCGGCTGAATCCTCAATGGTTATCAGGACCTGTGGGGATTGTTC ATATGTTACATAAGGGGTGGTCGCTAGGAATAGCAGAAGCTTTGTTTTGGATAGGGCTAGTAAGTATCAATCTAGCTGTT TTGAATCTCCTTCCAATTCCTGTATTAGATGGCGGCTATATTGTACTTTGCCTATGGGAGATGATCACAAGACGGCGTTT GAGTATGAAACTTATTGAGAGGATGTTAATACCATTTTCTTTATTATTAATAGCCTTCTTTATTTTTCTAACGTTTCAGG ATTTGTTTCGCTTTTTTGCAGTGAGTTAG
Upstream 100 bases:
>100_bases GAAAAATCATAGAGTTTCTTCGTGCACCTCGTTAGATGATGTCTTTTCTGTTGATAAAGAAGCTCGAGCTCTTGCTCAAG AGATATAACCTGGTACGTAT
Downstream 100 bases:
>100_bases GTTTCCAGATTTTAGGAAATCCATAAAGGTTATAAGGATGAGAACCAAAACAATGGATAATATAAATATCTTTGTTTTTG TTTGTATTCAACCTAGAGCT
Product: putative metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MTIIYFILAALALGVLVLVHELGHLLAAKSVGMAVESFSIGFGPTLYKKKIGNIEYRIGIFPFGGYVRIKGMDKREKGVD VDPDSVYDIPQGFFSKSPWKRIFVLAAGPIANVLLAFVAFGALYISGGRSKAYSEYSRIVGWVNPILKEKGLALGDEILT CNGKPYYSDKDAITSALLDGRLSFTGVHPGYLSETSSDFAFNTEFDVNKNGIPLAGASYLLYRHQEPISKESPLYSANIL PGDRLVWMDGQILFSPMQVSQILNEAYAFVKVSRHNKEFSVRIPRILVSTLYLSPYVRNELIDNQYEAGIKGKWSSLYTL PYVINSYGYVEGELQPIDPESPFPSMEEKLELGDRIIAIDGTPVSGSTDILRLVQNHKVSIIVQKMTPEQLEDVDSSLAD KRFIHSYNAQDLLAIIHSIGSTQEVRESGQYRLLPPVHPKPWVSIYSDDLLNKRREMAKRFKNQDQQRYYLDRIEIEKQR LSLGIPLRDMTVKYNPRPDVLIAHIAKDSLRTMKALVVGRLNPQWLSGPVGIVHMLHKGWSLGIAEALFWIGLVSINLAV LNLLPIPVLDGGYIVLCLWEMITRRRLSMKLIERMLIPFSLLLIAFFIFLTFQDLFRFFAVS
Sequences:
>Translated_622_residues MTIIYFILAALALGVLVLVHELGHLLAAKSVGMAVESFSIGFGPTLYKKKIGNIEYRIGIFPFGGYVRIKGMDKREKGVD VDPDSVYDIPQGFFSKSPWKRIFVLAAGPIANVLLAFVAFGALYISGGRSKAYSEYSRIVGWVNPILKEKGLALGDEILT CNGKPYYSDKDAITSALLDGRLSFTGVHPGYLSETSSDFAFNTEFDVNKNGIPLAGASYLLYRHQEPISKESPLYSANIL PGDRLVWMDGQILFSPMQVSQILNEAYAFVKVSRHNKEFSVRIPRILVSTLYLSPYVRNELIDNQYEAGIKGKWSSLYTL PYVINSYGYVEGELQPIDPESPFPSMEEKLELGDRIIAIDGTPVSGSTDILRLVQNHKVSIIVQKMTPEQLEDVDSSLAD KRFIHSYNAQDLLAIIHSIGSTQEVRESGQYRLLPPVHPKPWVSIYSDDLLNKRREMAKRFKNQDQQRYYLDRIEIEKQR LSLGIPLRDMTVKYNPRPDVLIAHIAKDSLRTMKALVVGRLNPQWLSGPVGIVHMLHKGWSLGIAEALFWIGLVSINLAV LNLLPIPVLDGGYIVLCLWEMITRRRLSMKLIERMLIPFSLLLIAFFIFLTFQDLFRFFAVS >Mature_621_residues TIIYFILAALALGVLVLVHELGHLLAAKSVGMAVESFSIGFGPTLYKKKIGNIEYRIGIFPFGGYVRIKGMDKREKGVDV DPDSVYDIPQGFFSKSPWKRIFVLAAGPIANVLLAFVAFGALYISGGRSKAYSEYSRIVGWVNPILKEKGLALGDEILTC NGKPYYSDKDAITSALLDGRLSFTGVHPGYLSETSSDFAFNTEFDVNKNGIPLAGASYLLYRHQEPISKESPLYSANILP GDRLVWMDGQILFSPMQVSQILNEAYAFVKVSRHNKEFSVRIPRILVSTLYLSPYVRNELIDNQYEAGIKGKWSSLYTLP YVINSYGYVEGELQPIDPESPFPSMEEKLELGDRIIAIDGTPVSGSTDILRLVQNHKVSIIVQKMTPEQLEDVDSSLADK RFIHSYNAQDLLAIIHSIGSTQEVRESGQYRLLPPVHPKPWVSIYSDDLLNKRREMAKRFKNQDQQRYYLDRIEIEKQRL SLGIPLRDMTVKYNPRPDVLIAHIAKDSLRTMKALVVGRLNPQWLSGPVGIVHMLHKGWSLGIAEALFWIGLVSINLAVL NLLPIPVLDGGYIVLCLWEMITRRRLSMKLIERMLIPFSLLLIAFFIFLTFQDLFRFFAVS
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M50B family [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=258, Percent_Identity=32.9457364341085, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 70081; Mature: 69949
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIYFILAALALGVLVLVHELGHLLAAKSVGMAVESFSIGFGPTLYKKKIGNIEYRIGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEE FPFGGYVRIKGMDKREKGVDVDPDSVYDIPQGFFSKSPWKRIFVLAAGPIANVLLAFVAF EECCCEEEEECCCCCCCCCCCCCCCHHHCCHHHCCCCCCCEEEEEECCHHHHHHHHHHHH GALYISGGRSKAYSEYSRIVGWVNPILKEKGLALGDEILTCNGKPYYSDKDAITSALLDG HHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCC RLSFTGVHPGYLSETSSDFAFNTEFDVNKNGIPLAGASYLLYRHQEPISKESPLYSANIL CCEEEECCCCCCCCCCCCCEECCEECCCCCCCCCCCCHHEEEECCCCCCCCCCCEEEECC PGDRLVWMDGQILFSPMQVSQILNEAYAFVKVSRHNKEFSVRIPRILVSTLYLSPYVRNE CCCEEEEECCCEEECHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHHCHHHHHH LIDNQYEAGIKGKWSSLYTLPYVINSYGYVEGELQPIDPESPFPSMEEKLELGDRIIAID HHCCHHCCCCCCCCCCEEEHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEC GTPVSGSTDILRLVQNHKVSIIVQKMTPEQLEDVDSSLADKRFIHSYNAQDLLAIIHSIG CCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC STQEVRESGQYRLLPPVHPKPWVSIYSDDLLNKRREMAKRFKNQDQQRYYLDRIEIEKQR CCHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSLGIPLRDMTVKYNPRPDVLIAHIAKDSLRTMKALVVGRLNPQWLSGPVGIVHMLHKGW HHCCCCEECCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCC SLGIAEALFWIGLVSINLAVLNLLPIPVLDGGYIVLCLWEMITRRRLSMKLIERMLIPFS CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLIAFFIFLTFQDLFRFFAVS HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIIYFILAALALGVLVLVHELGHLLAAKSVGMAVESFSIGFGPTLYKKKIGNIEYRIGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEE FPFGGYVRIKGMDKREKGVDVDPDSVYDIPQGFFSKSPWKRIFVLAAGPIANVLLAFVAF EECCCEEEEECCCCCCCCCCCCCCCHHHCCHHHCCCCCCCEEEEEECCHHHHHHHHHHHH GALYISGGRSKAYSEYSRIVGWVNPILKEKGLALGDEILTCNGKPYYSDKDAITSALLDG HHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCC RLSFTGVHPGYLSETSSDFAFNTEFDVNKNGIPLAGASYLLYRHQEPISKESPLYSANIL CCEEEECCCCCCCCCCCCCEECCEECCCCCCCCCCCCHHEEEECCCCCCCCCCCEEEECC PGDRLVWMDGQILFSPMQVSQILNEAYAFVKVSRHNKEFSVRIPRILVSTLYLSPYVRNE CCCEEEEECCCEEECHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHHCHHHHHH LIDNQYEAGIKGKWSSLYTLPYVINSYGYVEGELQPIDPESPFPSMEEKLELGDRIIAID HHCCHHCCCCCCCCCCEEEHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEC GTPVSGSTDILRLVQNHKVSIIVQKMTPEQLEDVDSSLADKRFIHSYNAQDLLAIIHSIG CCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC STQEVRESGQYRLLPPVHPKPWVSIYSDDLLNKRREMAKRFKNQDQQRYYLDRIEIEKQR CCHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSLGIPLRDMTVKYNPRPDVLIAHIAKDSLRTMKALVVGRLNPQWLSGPVGIVHMLHKGW HHCCCCEECCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCC SLGIAEALFWIGLVSINLAVLNLLPIPVLDGGYIVLCLWEMITRRRLSMKLIERMLIPFS CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLIAFFIFLTFQDLFRFFAVS HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]