| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is dut
Identifier: 62184969
GI number: 62184969
Start: 392117
End: 392560
Strand: Direct
Name: dut
Synonym: CAB338A
Alternate gene names: 62184969
Gene position: 392117-392560 (Clockwise)
Preceding gene: 62184968
Following gene: 62184970
Centisome position: 34.26
GC content: 45.72
Gene sequence:
>444_bases ATGACTATATTATGTGAATTAGAATCTGGAGTATCTCTTCCAGAATATGCTACCGAAGGGGCTTCAGGAGCAGACCTTCG AGCGAATATTAAAGAGCCGATGGCTGTCTTGCCAGGACAACGTGTACTGGTTCCTACAGGAATAAAAATGCAGATCCCAC AAGGCTATGAAGTTCAGGTGCGTCCACGCAGTGGGTTCGCACTGAAGCATGGGATTATGGTTGTGAATTCTCCGGGAACA ATTGATGCAGATTATCGTGGTGAGGTTTGCATTATACTTGCAAATTTTGGAGAGAGTACTTTTATTATCGAACCCAAGAT GCGCATTGCTCAAGCTGTAGTTGCTCCCGTAGTCCAGGCAAAGTTTATCGCCGTGGATCAAGAAGAAGGACTAACAACAA CGTCTCGGGGAAGTAGAGGTTTTGGGCATACCGGAGAGAAGTGA
Upstream 100 bases:
>100_bases TAGGGATTTATCCAAGACAATTAAAGAAATTTTTTTGTTGACAGATGACAGTGAATAAAACATCATACCCGCTACTCGTA GTAACCACGGCGCTGTTCCT
Downstream 100 bases:
>100_bases CATGCCTTTCTATTGCGAGAATCAATCTGATTTTTCCTTGTTTTCTCTTTTATCTCCTAACTTGATTATGTTTTTGAATA AAACCTCACGAGAGGAGATT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTILCELESGVSLPEYATEGASGADLRANIKEPMAVLPGQRVLVPTGIKMQIPQGYEVQVRPRSGFALKHGIMVVNSPGT IDADYRGEVCIILANFGESTFIIEPKMRIAQAVVAPVVQAKFIAVDQEEGLTTTSRGSRGFGHTGEK
Sequences:
>Translated_147_residues MTILCELESGVSLPEYATEGASGADLRANIKEPMAVLPGQRVLVPTGIKMQIPQGYEVQVRPRSGFALKHGIMVVNSPGT IDADYRGEVCIILANFGESTFIIEPKMRIAQAVVAPVVQAKFIAVDQEEGLTTTSRGSRGFGHTGEK >Mature_146_residues TILCELESGVSLPEYATEGASGADLRANIKEPMAVLPGQRVLVPTGIKMQIPQGYEVQVRPRSGFALKHGIMVVNSPGTI DADYRGEVCIILANFGESTFIIEPKMRIAQAVVAPVVQAKFIAVDQEEGLTTTSRGSRGFGHTGEK
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family
Homologues:
Organism=Homo sapiens, GI70906444, Length=144, Percent_Identity=34.0277777777778, Blast_Score=78, Evalue=2e-15, Organism=Homo sapiens, GI4503423, Length=144, Percent_Identity=34.0277777777778, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI70906441, Length=144, Percent_Identity=34.0277777777778, Blast_Score=76, Evalue=9e-15, Organism=Escherichia coli, GI1790071, Length=136, Percent_Identity=44.1176470588235, Blast_Score=115, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71988561, Length=134, Percent_Identity=43.2835820895522, Blast_Score=96, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6319729, Length=136, Percent_Identity=32.3529411764706, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI24583610, Length=135, Percent_Identity=34.8148148148148, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI19921126, Length=135, Percent_Identity=34.8148148148148, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DUT_CHLAB (Q5L6D8)
Other databases:
- EMBL: CR848038 - RefSeq: YP_219754.1 - ProteinModelPortal: Q5L6D8 - SMR: Q5L6D8 - GeneID: 3337655 - GenomeReviews: CR848038_GR - HOGENOM: HBG436079 - OMA: LDLRACI - PhylomeDB: Q5L6D8 - ProtClustDB: PRK00601 - BioCyc: CABO218497:CAB338A-MONOMER - BRENDA: 3.6.1.23 - HAMAP: MF_00116 - InterPro: IPR008180 - InterPro: IPR008181 - TIGRFAMs: TIGR00576
Pfam domain/function: PF00692 dUTPase
EC number: =3.6.1.23
Molecular weight: Translated: 15729; Mature: 15598
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: BINDING 76-76
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILCELESGVSLPEYATEGASGADLRANIKEPMAVLPGQRVLVPTGIKMQIPQGYEVQV CEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCEEEEECCCEEECCCCCEEEE RPRSGFALKHGIMVVNSPGTIDADYRGEVCIILANFGESTFIIEPKMRIAQAVVAPVVQA ECCCCCEEECCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHCE KFIAVDQEEGLTTTSRGSRGFGHTGEK EEEEEECCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure TILCELESGVSLPEYATEGASGADLRANIKEPMAVLPGQRVLVPTGIKMQIPQGYEVQV EEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCEEEEECCCEEECCCCCEEEE RPRSGFALKHGIMVVNSPGTIDADYRGEVCIILANFGESTFIIEPKMRIAQAVVAPVVQA ECCCCCEEECCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHCE KFIAVDQEEGLTTTSRGSRGFGHTGEK EEEEEECCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA