| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184902
Identifier: 62184902
GI number: 62184902
Start: 286180
End: 287178
Strand: Direct
Name: 62184902
Synonym: CAB261
Alternate gene names: NA
Gene position: 286180-287178 (Clockwise)
Preceding gene: 62184901
Following gene: 62184903
Centisome position: 25.01
GC content: 41.14
Gene sequence:
>999_bases ATGATTAAAATAACACAGAGTTTTAGACCGTATACGTTAATTCCTGGCATGTGCCTCCCCATTCCGGGATCGGCATGGTA TGCTCAGGTATTTCCTACAGTATGGCGCATATTTTCGCCTACACATGAACTTCTGGATGAGGGTTATGTCAACGCTCAGG GACCTTTAAAGCGCTTTGCTGTATTTCAAGATTTGCATCGTGGAGGTCTTGCCGTTGTTTGTGAACAATACAAATACTAC ATCCTTCCCTCTGGGGAAAAAGTCGATTCTTTGAAAGGTCAATTACCTTGTGCAGATTCTGCCGAGCCGTTACTTTCTCT AGGCGTGCATAAACATGCAGATTTGCATAAAATACGTTATCGTAGAGATTTAAAAGAGATCCTTCCTTTATGGTTGCGGT TAGGTGCTCTTATCCCCACAGATGTACAAGATGAAGAATGCCTGAAACGGGGGAGTGGAAAACTTCTCGTTACCGCATAC CAAAAAATTCAAGAAAGAAAAAAAACAGAAATTTACTCTGCGCTATCTTCGTTATATTTTGCAGGATTTTCCGAGAACCT CTTACCTAGGATTTACGATACAGAATACCAGGGGATTCTTAAAGAGATGCCAAACAAAGAAGGGCGAGAAAAGGTACCGT TTTCTTTATTGAGTTACAGTTTAGCGATGTTGCGCGATCTCTTTATTATGCGGGATAAAGAGATTGTGGAGATTCTTCCT TCATTACCTCCAGAGTTTCCTTGTGGGAGGTTGATCCATGTCCACCTGAAGGGAATGGGAAAAATTTCAGTAGAATGGAG TAAGAAGACAGTACGGCGTGTCTGTTTACACGCTGAGGAAAACACCGAGCTTCTTTTATGTGTTTCTTCAGAGTTATCTA GTTGTCGTTTACGCCAATGGGAAAAGAAACAGTTGGTGGGGTCGTCTACAGTTTCTTTAGGAGAAAGTATGGAGATAAAA AACCAAACTACGTATTTATGGGATTGTTTCCGTAAATAA
Upstream 100 bases:
>100_bases ATATGGTAGGTTTCCCTGCCGATCCTGATGTTTCTGTGAATACATTAATCGATGTCCGTATCGAGAGTGTCGAAGAAGAT ATTCTCAAAGGAAAACGTGT
Downstream 100 bases:
>100_bases GATAGTTTTTCCATGGTCGAGAGGATTGTAAACTCTGAAGACGTCTCCTTATTAGTTTCTGGAAGGCAGAGCAATCCTCA TAAGTTTTTAGGGATTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MIKITQSFRPYTLIPGMCLPIPGSAWYAQVFPTVWRIFSPTHELLDEGYVNAQGPLKRFAVFQDLHRGGLAVVCEQYKYY ILPSGEKVDSLKGQLPCADSAEPLLSLGVHKHADLHKIRYRRDLKEILPLWLRLGALIPTDVQDEECLKRGSGKLLVTAY QKIQERKKTEIYSALSSLYFAGFSENLLPRIYDTEYQGILKEMPNKEGREKVPFSLLSYSLAMLRDLFIMRDKEIVEILP SLPPEFPCGRLIHVHLKGMGKISVEWSKKTVRRVCLHAEENTELLLCVSSELSSCRLRQWEKKQLVGSSTVSLGESMEIK NQTTYLWDCFRK
Sequences:
>Translated_332_residues MIKITQSFRPYTLIPGMCLPIPGSAWYAQVFPTVWRIFSPTHELLDEGYVNAQGPLKRFAVFQDLHRGGLAVVCEQYKYY ILPSGEKVDSLKGQLPCADSAEPLLSLGVHKHADLHKIRYRRDLKEILPLWLRLGALIPTDVQDEECLKRGSGKLLVTAY QKIQERKKTEIYSALSSLYFAGFSENLLPRIYDTEYQGILKEMPNKEGREKVPFSLLSYSLAMLRDLFIMRDKEIVEILP SLPPEFPCGRLIHVHLKGMGKISVEWSKKTVRRVCLHAEENTELLLCVSSELSSCRLRQWEKKQLVGSSTVSLGESMEIK NQTTYLWDCFRK >Mature_332_residues MIKITQSFRPYTLIPGMCLPIPGSAWYAQVFPTVWRIFSPTHELLDEGYVNAQGPLKRFAVFQDLHRGGLAVVCEQYKYY ILPSGEKVDSLKGQLPCADSAEPLLSLGVHKHADLHKIRYRRDLKEILPLWLRLGALIPTDVQDEECLKRGSGKLLVTAY QKIQERKKTEIYSALSSLYFAGFSENLLPRIYDTEYQGILKEMPNKEGREKVPFSLLSYSLAMLRDLFIMRDKEIVEILP SLPPEFPCGRLIHVHLKGMGKISVEWSKKTVRRVCLHAEENTELLLCVSSELSSCRLRQWEKKQLVGSSTVSLGESMEIK NQTTYLWDCFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38084; Mature: 38084
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKITQSFRPYTLIPGMCLPIPGSAWYAQVFPTVWRIFSPTHELLDEGYVNAQGPLKRFA CEEECCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHH VFQDLHRGGLAVVCEQYKYYILPSGEKVDSLKGQLPCADSAEPLLSLGVHKHADLHKIRY HHHHHHCCCCEEEEECCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHH RRDLKEILPLWLRLGALIPTDVQDEECLKRGSGKLLVTAYQKIQERKKTEIYSALSSLYF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AGFSENLLPRIYDTEYQGILKEMPNKEGREKVPFSLLSYSLAMLRDLFIMRDKEIVEILP HCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH SLPPEFPCGRLIHVHLKGMGKISVEWSKKTVRRVCLHAEENTELLLCVSSELSSCRLRQW CCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH EKKQLVGSSTVSLGESMEIKNQTTYLWDCFRK HHHHHCCCHHHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MIKITQSFRPYTLIPGMCLPIPGSAWYAQVFPTVWRIFSPTHELLDEGYVNAQGPLKRFA CEEECCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHH VFQDLHRGGLAVVCEQYKYYILPSGEKVDSLKGQLPCADSAEPLLSLGVHKHADLHKIRY HHHHHHCCCCEEEEECCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHH RRDLKEILPLWLRLGALIPTDVQDEECLKRGSGKLLVTAYQKIQERKKTEIYSALSSLYF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AGFSENLLPRIYDTEYQGILKEMPNKEGREKVPFSLLSYSLAMLRDLFIMRDKEIVEILP HCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH SLPPEFPCGRLIHVHLKGMGKISVEWSKKTVRRVCLHAEENTELLLCVSSELSSCRLRQW CCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH EKKQLVGSSTVSLGESMEIKNQTTYLWDCFRK HHHHHCCCHHHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA