| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184893
Identifier: 62184893
GI number: 62184893
Start: 272528
End: 274144
Strand: Direct
Name: 62184893
Synonym: CAB251
Alternate gene names: NA
Gene position: 272528-274144 (Clockwise)
Preceding gene: 62184892
Following gene: 62184894
Centisome position: 23.81
GC content: 45.45
Gene sequence:
>1617_bases TTGCGTCAGCATTTGCTTATTGGTGATTTCCCTCGAGCTATTCAGGAAGCTCAGGCCCTTTTGTCCTCTTCCGAATGTTC GCTCTCCACAACCCGACTTGCCCTAAAAGCCTTAGCCCGAGGGAAGGATTACGACTCCTGGAATCGAGGGTTTACTAAAG CTCGTCAATGCTACCCGCAACTAGCTAAAGATCGCGATACCTTAGAAGATTTTGCTCAACAAGTGCTTTCGGATGGTATG CGCCATCCTTCAATGACGGTACGCGCAGTGAGTATACTGTCTATAGGCTTAGCTAGAGACTTTCGTTTAGTCCCTCTTGT TTTAGCGAGTCTGTCTGATGATAGCGTGATTGTGCGTACCCTGGGCCTACAGGTCGTCTTGCAGTATGGATCTCAGAGTT TAAAAGATGCTGTCTGTAAAATTGCGCGCCACGATGATTCTATGCAAGTGCGTATGATAGCCTACCAAATTGCTGCGATT TTAGATATTGAAGAACTCCTTCCTTATCTTCAAGAACGTGCAAATAACAAACTTGTCGATGGTGAGGAACGTCGGGAGGC GTGGAAAGCTTCTCTCATGCTGACCCCACATGGGCTGTCTAAATCTAGAGTACACGAAGATATGGATCAGGCTTTATTTG CCTGCGAACTCTTGCATCATTTGGGAGAAGAAAAAGAGGAGAGTGTGCTCCTAGATTTATTATCTATTCGGTACCCGGAA GTTCAAGAAGCAGCATTACGCGCAGCCTTGTCTTGTGGACGTGAGGTGAGCTGTGAATCAAAAAAAATTGCTGATCAAGT GCACGCCATGGCTCAAACGTCTCCCTTCCCTAAAGTCCGTCTACAGGCAGCAGCTCTTCTCTATCTTCAAGGAGATCCTT TAGGGGAAGATTTGCTAGTGCAAGGTTTACTTTCTCCTCTCGCCTCGATTTGTGAGTCAGCATCTGCTGCCGTATGTTCT TTAGGTATAGGCGGAAAAGATCTTGCTGATAAGTATCTGCATCGTGTGGTCTCCAGGAAGGCCGCAGCAAATCTCGCGAT TTTACTGCTTGTCAGTCGTACGCACGTGGAAAGAGCTGGTGATGTTATAGCGGATTTTATCAGTGATCCTGAGATGTGCT GGGCGATCGAACAGTTTCTTTGGAGTTCACAATGGAACCCTAAAAGTGCTTCTCTGCCTCTCTATTTTGATATGGTAAAA AGAGAGATAGGGAGAAAGCTGATCCGTTTGCTTGCGGTAGCAAAATATAGTAAAGTCAAAAAAGTGACGGGAGATTTTCT TTCTAATCGGCAACAACATGGCTGGAGTTTTTTTTCAGGAGTATTCTGGGAAGAAGGGGATGAACACACGGCGCAGATAT GGACTGCAGATAAAAGTTTTGCTTCTAAGTTAGAGTCCACGTTAGCTAGGTTGTGTCAGAAAAAAAATAGCGAATCTTTG CATCAAGCTATAGAGCTCTATCCTGAAAGTCGTTGGCAAGATAAACTTGCTATTTTAGAAGGTATCGCTTTTTCGGAAAA TCTCGAGGGCGTGGATTTCCTTCTGGAATGTTGTTCCCATGAAACCCCTTCGCTGCGTTGTGCAGCCGCAGGGGCTGTAT TTGCTCTATTTAAGTAG
Upstream 100 bases:
>100_bases TATTCCATTTACATATTCATCTTTTAGGTGGAAGCTCTTTGGGGGCTATTGCCTAATTTTTTTTTACTCTTTCGCTCATG TAGCTCATGGATCGCAATCT
Downstream 100 bases:
>100_bases ATCCGTTTCCTTGAGTTTGACTAAATTGTTGAGTGGATGCTCTGGGTCTATCCACCAGCTGATCTAAATGCATTTTGTAC TTTTCTAATTCTTCAATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MRQHLLIGDFPRAIQEAQALLSSSECSLSTTRLALKALARGKDYDSWNRGFTKARQCYPQLAKDRDTLEDFAQQVLSDGM RHPSMTVRAVSILSIGLARDFRLVPLVLASLSDDSVIVRTLGLQVVLQYGSQSLKDAVCKIARHDDSMQVRMIAYQIAAI LDIEELLPYLQERANNKLVDGEERREAWKASLMLTPHGLSKSRVHEDMDQALFACELLHHLGEEKEESVLLDLLSIRYPE VQEAALRAALSCGREVSCESKKIADQVHAMAQTSPFPKVRLQAAALLYLQGDPLGEDLLVQGLLSPLASICESASAAVCS LGIGGKDLADKYLHRVVSRKAAANLAILLLVSRTHVERAGDVIADFISDPEMCWAIEQFLWSSQWNPKSASLPLYFDMVK REIGRKLIRLLAVAKYSKVKKVTGDFLSNRQQHGWSFFSGVFWEEGDEHTAQIWTADKSFASKLESTLARLCQKKNSESL HQAIELYPESRWQDKLAILEGIAFSENLEGVDFLLECCSHETPSLRCAAAGAVFALFK
Sequences:
>Translated_538_residues MRQHLLIGDFPRAIQEAQALLSSSECSLSTTRLALKALARGKDYDSWNRGFTKARQCYPQLAKDRDTLEDFAQQVLSDGM RHPSMTVRAVSILSIGLARDFRLVPLVLASLSDDSVIVRTLGLQVVLQYGSQSLKDAVCKIARHDDSMQVRMIAYQIAAI LDIEELLPYLQERANNKLVDGEERREAWKASLMLTPHGLSKSRVHEDMDQALFACELLHHLGEEKEESVLLDLLSIRYPE VQEAALRAALSCGREVSCESKKIADQVHAMAQTSPFPKVRLQAAALLYLQGDPLGEDLLVQGLLSPLASICESASAAVCS LGIGGKDLADKYLHRVVSRKAAANLAILLLVSRTHVERAGDVIADFISDPEMCWAIEQFLWSSQWNPKSASLPLYFDMVK REIGRKLIRLLAVAKYSKVKKVTGDFLSNRQQHGWSFFSGVFWEEGDEHTAQIWTADKSFASKLESTLARLCQKKNSESL HQAIELYPESRWQDKLAILEGIAFSENLEGVDFLLECCSHETPSLRCAAAGAVFALFK >Mature_538_residues MRQHLLIGDFPRAIQEAQALLSSSECSLSTTRLALKALARGKDYDSWNRGFTKARQCYPQLAKDRDTLEDFAQQVLSDGM RHPSMTVRAVSILSIGLARDFRLVPLVLASLSDDSVIVRTLGLQVVLQYGSQSLKDAVCKIARHDDSMQVRMIAYQIAAI LDIEELLPYLQERANNKLVDGEERREAWKASLMLTPHGLSKSRVHEDMDQALFACELLHHLGEEKEESVLLDLLSIRYPE VQEAALRAALSCGREVSCESKKIADQVHAMAQTSPFPKVRLQAAALLYLQGDPLGEDLLVQGLLSPLASICESASAAVCS LGIGGKDLADKYLHRVVSRKAAANLAILLLVSRTHVERAGDVIADFISDPEMCWAIEQFLWSSQWNPKSASLPLYFDMVK REIGRKLIRLLAVAKYSKVKKVTGDFLSNRQQHGWSFFSGVFWEEGDEHTAQIWTADKSFASKLESTLARLCQKKNSESL HQAIELYPESRWQDKLAILEGIAFSENLEGVDFLLECCSHETPSLRCAAAGAVFALFK
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59918; Mature: 59918
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQHLLIGDFPRAIQEAQALLSSSECSLSTTRLALKALARGKDYDSWNRGFTKARQCYPQ CCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LAKDRDTLEDFAQQVLSDGMRHPSMTVRAVSILSIGLARDFRLVPLVLASLSDDSVIVRT HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH LGLQVVLQYGSQSLKDAVCKIARHDDSMQVRMIAYQIAAILDIEELLPYLQERANNKLVD HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEERREAWKASLMLTPHGLSKSRVHEDMDQALFACELLHHLGEEKEESVLLDLLSIRYPE CHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH VQEAALRAALSCGREVSCESKKIADQVHAMAQTSPFPKVRLQAAALLYLQGDPLGEDLLV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCCCCHHHHH QGLLSPLASICESASAAVCSLGIGGKDLADKYLHRVVSRKAAANLAILLLVSRTHVERAG HHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVIADFISDPEMCWAIEQFLWSSQWNPKSASLPLYFDMVKREIGRKLIRLLAVAKYSKVK HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVTGDFLSNRQQHGWSFFSGVFWEEGDEHTAQIWTADKSFASKLESTLARLCQKKNSESL HHHHHHHCCCHHCCHHHHHCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHH HQAIELYPESRWQDKLAILEGIAFSENLEGVDFLLECCSHETPSLRCAAAGAVFALFK HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRQHLLIGDFPRAIQEAQALLSSSECSLSTTRLALKALARGKDYDSWNRGFTKARQCYPQ CCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LAKDRDTLEDFAQQVLSDGMRHPSMTVRAVSILSIGLARDFRLVPLVLASLSDDSVIVRT HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH LGLQVVLQYGSQSLKDAVCKIARHDDSMQVRMIAYQIAAILDIEELLPYLQERANNKLVD HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEERREAWKASLMLTPHGLSKSRVHEDMDQALFACELLHHLGEEKEESVLLDLLSIRYPE CHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH VQEAALRAALSCGREVSCESKKIADQVHAMAQTSPFPKVRLQAAALLYLQGDPLGEDLLV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCCCCHHHHH QGLLSPLASICESASAAVCSLGIGGKDLADKYLHRVVSRKAAANLAILLLVSRTHVERAG HHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVIADFISDPEMCWAIEQFLWSSQWNPKSASLPLYFDMVKREIGRKLIRLLAVAKYSKVK HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVTGDFLSNRQQHGWSFFSGVFWEEGDEHTAQIWTADKSFASKLESTLARLCQKKNSESL HHHHHHHCCCHHCCHHHHHCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHH HQAIELYPESRWQDKLAILEGIAFSENLEGVDFLLECCSHETPSLRCAAAGAVFALFK HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA