Definition Chlamydophila abortus S26/3, complete genome.
Accession NC_004552
Length 1,144,377

Click here to switch to the map view.

The map label for this gene is 62184829

Identifier: 62184829

GI number: 62184829

Start: 203965

End: 204915

Strand: Direct

Name: 62184829

Synonym: CAB185

Alternate gene names: NA

Gene position: 203965-204915 (Clockwise)

Preceding gene: 62184826

Following gene: 62184830

Centisome position: 17.82

GC content: 40.06

Gene sequence:

>951_bases
ATGTATTATCTTTGTTTTTTCATATTGATAACTTCTTTTTTAACAGGTCACGCTTCTCCTGTGGCCTCCTCTGAAGTTTT
CCCCTGGATAGCACCGAAATCTCTTACCGTGCTCGGTAGCCCATTTATCGATGTGATCCTCGAAACCCCTAAGGAATTTA
TTGAAAAATGTGATGTGAAAGTAGGTGAGATACAAAACATCAACAGCTCAGATATAAAAAAGATTTTTTTGATGTATAGG
GAAACCTTTCCCGAAAATCCTATCACAGTAACCAGGAAAGAACCTCTAAGCCTTACAGAAGATCAACTAGCCAATCTAGG
TTGTATAAGTTTATTAAACAAGCCGCCTTATCTTCATTACGGAAAACAGGCAGAATACGGGCCAGCTCTGCAGGCATGGG
ATCATCTCCGACTGATTCTTCGTTGCCCAAACCAAGAAGATACCTTCTGCTATTTTCTTGAAGAAACTCCCAAATCCTTG
GCAGAACTCTCTTTATCCTCGGATGTGGGATATACCTTGATTGATAGCGATTTATTGATCTACGGTTGCTACATAGAAAG
TTTTCTAAAAAAAGCACGCGGTCCTAACCATAAAATCCTATTCGATCTTAACAATCCTCATATTGTCCAGCACTATAGAG
ACCGCGTTTGGTCTCTGTTGCCCTATATCGATGTTCTCTTTCTATCAGAAGAGTCAACAAAGTCGTTAACAGGGATGTCG
AACGCAAGTTTAGGTAGACGTTTGCTTTCCCACATGATTCCGACCGTGTTTGTACAAAATACAGCAGAAGAGAAGGCTCA
GATCTATTTTATCCAACATGGTAAAGAAACCGTGTATTCCGCCACACAGGAATTACAACAAATAGTCTTAGCGTTTCTCT
TCGGTTATATTCACGATAATGTCATCGATTATTGTTTTCATGCAGGGGATCTCTTGTTAGAGTACGCCTAA

Upstream 100 bases:

>100_bases
AGGTTCCCTTGGACTTAAAAAGAAAACATTATAAAAAAAATAGGATAAGAAAACACTTAAATAAAAGTTTTCAATCTATT
GTTGTGATTTAGATTCTTTT

Downstream 100 bases:

>100_bases
TTTCTTCTCGATCAGTTCAGGAAGCCGTTTTTGTAATTCTAAAACTGAAAAATATCTTTTCGATATTAGAATAATTTTTT
TGAATATCAGATGATTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MYYLCFFILITSFLTGHASPVASSEVFPWIAPKSLTVLGSPFIDVILETPKEFIEKCDVKVGEIQNINSSDIKKIFLMYR
ETFPENPITVTRKEPLSLTEDQLANLGCISLLNKPPYLHYGKQAEYGPALQAWDHLRLILRCPNQEDTFCYFLEETPKSL
AELSLSSDVGYTLIDSDLLIYGCYIESFLKKARGPNHKILFDLNNPHIVQHYRDRVWSLLPYIDVLFLSEESTKSLTGMS
NASLGRRLLSHMIPTVFVQNTAEEKAQIYFIQHGKETVYSATQELQQIVLAFLFGYIHDNVIDYCFHAGDLLLEYA

Sequences:

>Translated_316_residues
MYYLCFFILITSFLTGHASPVASSEVFPWIAPKSLTVLGSPFIDVILETPKEFIEKCDVKVGEIQNINSSDIKKIFLMYR
ETFPENPITVTRKEPLSLTEDQLANLGCISLLNKPPYLHYGKQAEYGPALQAWDHLRLILRCPNQEDTFCYFLEETPKSL
AELSLSSDVGYTLIDSDLLIYGCYIESFLKKARGPNHKILFDLNNPHIVQHYRDRVWSLLPYIDVLFLSEESTKSLTGMS
NASLGRRLLSHMIPTVFVQNTAEEKAQIYFIQHGKETVYSATQELQQIVLAFLFGYIHDNVIDYCFHAGDLLLEYA
>Mature_316_residues
MYYLCFFILITSFLTGHASPVASSEVFPWIAPKSLTVLGSPFIDVILETPKEFIEKCDVKVGEIQNINSSDIKKIFLMYR
ETFPENPITVTRKEPLSLTEDQLANLGCISLLNKPPYLHYGKQAEYGPALQAWDHLRLILRCPNQEDTFCYFLEETPKSL
AELSLSSDVGYTLIDSDLLIYGCYIESFLKKARGPNHKILFDLNNPHIVQHYRDRVWSLLPYIDVLFLSEESTKSLTGMS
NASLGRRLLSHMIPTVFVQNTAEEKAQIYFIQHGKETVYSATQELQQIVLAFLFGYIHDNVIDYCFHAGDLLLEYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36112; Mature: 36112

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYLCFFILITSFLTGHASPVASSEVFPWIAPKSLTVLGSPFIDVILETPKEFIEKCDVK
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCHHHHHHHCCCC
VGEIQNINSSDIKKIFLMYRETFPENPITVTRKEPLSLTEDQLANLGCISLLNKPPYLHY
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHHCCCCCCCC
GKQAEYGPALQAWDHLRLILRCPNQEDTFCYFLEETPKSLAELSLSSDVGYTLIDSDLLI
CCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCHHH
YGCYIESFLKKARGPNHKILFDLNNPHIVQHYRDRVWSLLPYIDVLFLSEESTKSLTGMS
HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCC
NASLGRRLLSHMIPTVFVQNTAEEKAQIYFIQHGKETVYSATQELQQIVLAFLFGYIHDN
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VIDYCFHAGDLLLEYA
HHHHHHHHHHHHEECC
>Mature Secondary Structure
MYYLCFFILITSFLTGHASPVASSEVFPWIAPKSLTVLGSPFIDVILETPKEFIEKCDVK
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCHHHHHHHCCCC
VGEIQNINSSDIKKIFLMYRETFPENPITVTRKEPLSLTEDQLANLGCISLLNKPPYLHY
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHHCCCCCCCC
GKQAEYGPALQAWDHLRLILRCPNQEDTFCYFLEETPKSLAELSLSSDVGYTLIDSDLLI
CCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCHHH
YGCYIESFLKKARGPNHKILFDLNNPHIVQHYRDRVWSLLPYIDVLFLSEESTKSLTGMS
HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCC
NASLGRRLLSHMIPTVFVQNTAEEKAQIYFIQHGKETVYSATQELQQIVLAFLFGYIHDN
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VIDYCFHAGDLLLEYA
HHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA