| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184821
Identifier: 62184821
GI number: 62184821
Start: 193885
End: 195033
Strand: Direct
Name: 62184821
Synonym: CAB177
Alternate gene names: NA
Gene position: 193885-195033 (Clockwise)
Preceding gene: 62184820
Following gene: 62184822
Centisome position: 16.94
GC content: 43.17
Gene sequence:
>1149_bases ATGTTTTCAGTCACTCAACCATCTGTTACAGGTAATTCCTTGTGTACGATGAACCCCAAACCTGAAATCCTTATATTTTC TTCCGAAGCTGCTCGTAAGGCATATCAGAGAAGGGCCTGCTGTCCTGTGATTTACAAGTTACTTGATGTTATTAGTGCTA TAGTTAAGTTCATTATTCGAGTTATTTTATTCATTCCCCTAGGTTTACTTTGGGTGTTGGGAAAGATATGCCAGAACGTC ATGCTTCCTGCTGCAGGTGGGGCCTTCGTCGTGCCTCTGTGTTCCCCCAGAAAGTTATTACAGGAGGCCTTTCAGATCCA AACGAACGGTTTGGTAAACGAGGGTTATGCAAGTTCTGTGACACGTGTGCCGATTCAATGTGATGATTTATTTATTGATG CGATGAAAATCACCTTCCCAGAGGCCAGAACAGATAGGTGGATGCTTGTCTCTTTAGGGAATAGTGAGTGTTTTGAAAAT AGAACGGTTCTGCTCTATGACGATGATTGGATACTCAATATCGCCAAACAAACTCAATCCAATGTCTTGGTATTTAACTA CCCAGGAGTCATGCATAGTAAAGGGCATATTTCACCCCAATCTTTAGGTAAATCTTACCAAGCTTGTGTGCATTATCTTC GCGATCACCCCGAAGGGCCAAAAGCCACGCAAGTGATTGCCTACGGCTATTCTTTAGGTACCCTAGTACAGGCTCAAGCG CTAAGTAACGAAGTCACTGATGGACGAGACGGTGTTCGCTGGTTTGTCGTTAAAGATCGTGGACCAAAGTCAGTTTCATC CATTGCCCTTCAATGGTTGGGGCAACTAGGAGTGTGGACGATTAAGTTGTTAAACTGGGAGATAAACTCTGCGAAGTTAA GCGAATCTCTTGTCTGCCCAGAATTATTTATACACGGAGTAGATTGCGAATCAAAATTAATAGGGGACGGCTTGTTCACC AGGGATAACTGTTTTGCAGCGCCATTTTTAGATCCCCATGCCCCTGTTCTTCCCGGTAGGAAGATCCCTGTAGGAGAATA TCTTCTAGATCATCAAGGTCCTCTGGATAGGAACACTATACAACAGATTGTTGAACACATTAAGGTTCATTTTGATTCGG AAGACTCAACTAATCGAAACAACAGTTGA
Upstream 100 bases:
>100_bases GAAATATTTAATTTAAGTACATGAATAGGAACATTTTCTTTGTTTTATTCCACATTTTTTTTAAAATGCCCGCTTTTAAC TTTTATACTCGTCAGTAGAT
Downstream 100 bases:
>100_bases TGCGAGCTAACTTCAACCACACGAAAACGTATTTGTGCCCGGATAGAGAATCTTTTACGTAAAAGGTTCTCTATGGCACT GTTGTCCCTACCCTAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MFSVTQPSVTGNSLCTMNPKPEILIFSSEAARKAYQRRACCPVIYKLLDVISAIVKFIIRVILFIPLGLLWVLGKICQNV MLPAAGGAFVVPLCSPRKLLQEAFQIQTNGLVNEGYASSVTRVPIQCDDLFIDAMKITFPEARTDRWMLVSLGNSECFEN RTVLLYDDDWILNIAKQTQSNVLVFNYPGVMHSKGHISPQSLGKSYQACVHYLRDHPEGPKATQVIAYGYSLGTLVQAQA LSNEVTDGRDGVRWFVVKDRGPKSVSSIALQWLGQLGVWTIKLLNWEINSAKLSESLVCPELFIHGVDCESKLIGDGLFT RDNCFAAPFLDPHAPVLPGRKIPVGEYLLDHQGPLDRNTIQQIVEHIKVHFDSEDSTNRNNS
Sequences:
>Translated_382_residues MFSVTQPSVTGNSLCTMNPKPEILIFSSEAARKAYQRRACCPVIYKLLDVISAIVKFIIRVILFIPLGLLWVLGKICQNV MLPAAGGAFVVPLCSPRKLLQEAFQIQTNGLVNEGYASSVTRVPIQCDDLFIDAMKITFPEARTDRWMLVSLGNSECFEN RTVLLYDDDWILNIAKQTQSNVLVFNYPGVMHSKGHISPQSLGKSYQACVHYLRDHPEGPKATQVIAYGYSLGTLVQAQA LSNEVTDGRDGVRWFVVKDRGPKSVSSIALQWLGQLGVWTIKLLNWEINSAKLSESLVCPELFIHGVDCESKLIGDGLFT RDNCFAAPFLDPHAPVLPGRKIPVGEYLLDHQGPLDRNTIQQIVEHIKVHFDSEDSTNRNNS >Mature_382_residues MFSVTQPSVTGNSLCTMNPKPEILIFSSEAARKAYQRRACCPVIYKLLDVISAIVKFIIRVILFIPLGLLWVLGKICQNV MLPAAGGAFVVPLCSPRKLLQEAFQIQTNGLVNEGYASSVTRVPIQCDDLFIDAMKITFPEARTDRWMLVSLGNSECFEN RTVLLYDDDWILNIAKQTQSNVLVFNYPGVMHSKGHISPQSLGKSYQACVHYLRDHPEGPKATQVIAYGYSLGTLVQAQA LSNEVTDGRDGVRWFVVKDRGPKSVSSIALQWLGQLGVWTIKLLNWEINSAKLSESLVCPELFIHGVDCESKLIGDGLFT RDNCFAAPFLDPHAPVLPGRKIPVGEYLLDHQGPLDRNTIQQIVEHIKVHFDSEDSTNRNNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42503; Mature: 42503
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSVTQPSVTGNSLCTMNPKPEILIFSSEAARKAYQRRACCPVIYKLLDVISAIVKFIIR CCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VILFIPLGLLWVLGKICQNVMLPAAGGAFVVPLCSPRKLLQEAFQIQTNGLVNEGYASSV HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCE TRVPIQCDDLFIDAMKITFPEARTDRWMLVSLGNSECFENRTVLLYDDDWILNIAKQTQS EECCEEECCEEEEEEEEECCCCCCCCEEEEEECCCHHHCCCEEEEECCCEEEEEHHHCCC NVLVFNYPGVMHSKGHISPQSLGKSYQACVHYLRDHPEGPKATQVIAYGYSLGTLVQAQA CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHH LSNEVTDGRDGVRWFVVKDRGPKSVSSIALQWLGQLGVWTIKLLNWEINSAKLSESLVCP HHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHCCH ELFIHGVDCESKLIGDGLFTRDNCFAAPFLDPHAPVLPGRKIPVGEYLLDHQGPLDRNTI HHHEECCCCCHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHH QQIVEHIKVHFDSEDSTNRNNS HHHHHHHEEEECCCCCCCCCCC >Mature Secondary Structure MFSVTQPSVTGNSLCTMNPKPEILIFSSEAARKAYQRRACCPVIYKLLDVISAIVKFIIR CCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VILFIPLGLLWVLGKICQNVMLPAAGGAFVVPLCSPRKLLQEAFQIQTNGLVNEGYASSV HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCE TRVPIQCDDLFIDAMKITFPEARTDRWMLVSLGNSECFENRTVLLYDDDWILNIAKQTQS EECCEEECCEEEEEEEEECCCCCCCCEEEEEECCCHHHCCCEEEEECCCEEEEEHHHCCC NVLVFNYPGVMHSKGHISPQSLGKSYQACVHYLRDHPEGPKATQVIAYGYSLGTLVQAQA CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHH LSNEVTDGRDGVRWFVVKDRGPKSVSSIALQWLGQLGVWTIKLLNWEINSAKLSESLVCP HHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHCCH ELFIHGVDCESKLIGDGLFTRDNCFAAPFLDPHAPVLPGRKIPVGEYLLDHQGPLDRNTI HHHEECCCCCHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHH QQIVEHIKVHFDSEDSTNRNNS HHHHHHHEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA