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The map label for this gene is recJ [H]

Identifier: 62184820

GI number: 62184820

Start: 191662

End: 193434

Strand: Direct

Name: recJ [H]

Synonym: CAB176

Alternate gene names: 62184820

Gene position: 191662-193434 (Clockwise)

Preceding gene: 62184819

Following gene: 62184821

Centisome position: 16.75

GC content: 40.33

Gene sequence:

>1773_bases
ATGGCAAGTAAAGATAATTCTTCTGTATCTAGTCCTATTTGGATATATCCTAAGCACGATCCTGCTCTACTTTCTTTCAT
TATAAAGGAGTTCCATCTTCATCCGGTCGCTGCACAAACGTTTATTTCCCGAGGATTCCAAACAATAGATGAAGTCCGTG
ATTTCCTTTATGTGCATCTATCCAACCTGCATGATCCCGAACTGTTACTCGATATGTCAAAAGCTGTACAACGTTTGCTT
CTCGCAAAAGAACGTCGTGAGCATGTCATGGTCTACGGCGATAGTGATGTTGATGGGATCACAGGCGTGGCTCTTCTTGT
AGAGTTTTTGAGATCTATAGAAATCAAGGTCAGCTATTGTTTTTTAGGAGCGTTCCTTAAACATTATGGCGAACTTTCTT
TGTTGATTGCTAAGATGAAGGAAGAAGGTGTGACTTTGCTGATTACCGTAGATTGTGGAATTACCGCAGGGAAAGAAGTC
AGCGATATCAATAAGCAAGGCATTGATGTCATTGTTACAGATCATCATATGCCCACAGGTAAAATTCCTCATTGCGTAGC
CACATTAAATCCAAAGCTCAGAGATCATGCTTATCCAAATAAAGATCTCACCGGCGTCGGCGTCGCTTTTAAACTCGCCC
GCGGTGTTGTGGACGCCTTACAAAAAAATCATCCCAAACTCAAATTAGATATTCAGCATTTATTAGATTTAGTCTCTTTA
GGGACAGTGACGGATGTCGGGACTCTTTTAGGAGAGAATCGTACCATGGTACGCCACGGTATTAAAGAAATTGCTAAAGG
GTCACGGTTAGGACTACATAAATTATGCATTTTTTCAGGAGTAAATCCTTCAGAAGTTACCTCTACAGATATTGTTTTGA
AAATCTCTCCGAAACTGAATAGTTTAGGAAGACTTGCCGACGCTTCTAAAGGCGTGGAGTTGCTGCTTACCAAAGATCCA
GAAGTCGCTGATGACATCATTCAATATCTCGACAAGATAAATAGAGAACGCCAAAAAATAGAAGCAGACGTCTTTCATGA
TGTGCAAAAAATCTTAAAAAATCATCCCGATATCGTTAAACAAGCAGCTATCGTACTATCATCACAAGATTGGCATTCAA
GAGTCATTCCAATTATTTCAGCACGCCTAGCTAAAGCGTATAATAAGCCCGTAGCTATTATTTCTAATCAGGGAGGGGTA
GGGAAAGGATCGTTAAGAACAATAGGATCTTTCCCCCTTCTTGGCATATTACAAAAGTGCTCCCCTATGTTCATATCTTA
TGGGGGACACGATTTTGCCGCAGGCATTATCATTAATGAAGACCGAATAGAAGCTTTTAGGAAAAAGTTCATTCATCTTG
TGAATTCATCATTAAAAAAGGAAAAAGCCGTAGTCACCCTTCCCTTAGATGCCCGAGCAGATTTTGATGAGATCGATCAC
GATTTACTCTCTTCCATCGATCTGTTCGAACCTTTTGGTAAAGGCAATCCCGTACCCATATTTTATACCATAGTACATCA
GGTGCGTTACCCAAAGTTATTGCCAGGTAATCATCTGAAACTCTACCTGAATTACGGAGAAAGAAACTTAGAAGGCATAG
CTTTTGGATTAGGCGATAGAATCGGCGCTCTGAAAGCAAGTTGGAATCAACCTTTAGAACTTGCCTATACACCACGTTTA
TCCCAATCTGCTAACGGAGGAGTCATCCATTTGTTAGTGCGTGATTTTCATATTCTTCCACTCAATTACAAGGACACAAC
AGCAAAGTTTTAA

Upstream 100 bases:

>100_bases
AACAATAACCCTCAAGTTATTGTTGTTTTTGGTTCAGAAGGATGAGAAAATGCTCTTTAGAAAGATAGATTTTTAAAGAG
TTTTTACGACGCGAACATCT

Downstream 100 bases:

>100_bases
TCTTTTGAACATTAAACTTCTGCACCGCGTTTTTCAGATTTCTTAATACTTTTTTCTTGAGTTTTTCTCTAGCCTAGTTT
TAAATGATTCACCCAATTTT

Product: putative exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MASKDNSSVSSPIWIYPKHDPALLSFIIKEFHLHPVAAQTFISRGFQTIDEVRDFLYVHLSNLHDPELLLDMSKAVQRLL
LAKERREHVMVYGDSDVDGITGVALLVEFLRSIEIKVSYCFLGAFLKHYGELSLLIAKMKEEGVTLLITVDCGITAGKEV
SDINKQGIDVIVTDHHMPTGKIPHCVATLNPKLRDHAYPNKDLTGVGVAFKLARGVVDALQKNHPKLKLDIQHLLDLVSL
GTVTDVGTLLGENRTMVRHGIKEIAKGSRLGLHKLCIFSGVNPSEVTSTDIVLKISPKLNSLGRLADASKGVELLLTKDP
EVADDIIQYLDKINRERQKIEADVFHDVQKILKNHPDIVKQAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGV
GKGSLRTIGSFPLLGILQKCSPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDH
DLLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDRIGALKASWNQPLELAYTPRL
SQSANGGVIHLLVRDFHILPLNYKDTTAKF

Sequences:

>Translated_590_residues
MASKDNSSVSSPIWIYPKHDPALLSFIIKEFHLHPVAAQTFISRGFQTIDEVRDFLYVHLSNLHDPELLLDMSKAVQRLL
LAKERREHVMVYGDSDVDGITGVALLVEFLRSIEIKVSYCFLGAFLKHYGELSLLIAKMKEEGVTLLITVDCGITAGKEV
SDINKQGIDVIVTDHHMPTGKIPHCVATLNPKLRDHAYPNKDLTGVGVAFKLARGVVDALQKNHPKLKLDIQHLLDLVSL
GTVTDVGTLLGENRTMVRHGIKEIAKGSRLGLHKLCIFSGVNPSEVTSTDIVLKISPKLNSLGRLADASKGVELLLTKDP
EVADDIIQYLDKINRERQKIEADVFHDVQKILKNHPDIVKQAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGV
GKGSLRTIGSFPLLGILQKCSPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDH
DLLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDRIGALKASWNQPLELAYTPRL
SQSANGGVIHLLVRDFHILPLNYKDTTAKF
>Mature_589_residues
ASKDNSSVSSPIWIYPKHDPALLSFIIKEFHLHPVAAQTFISRGFQTIDEVRDFLYVHLSNLHDPELLLDMSKAVQRLLL
AKERREHVMVYGDSDVDGITGVALLVEFLRSIEIKVSYCFLGAFLKHYGELSLLIAKMKEEGVTLLITVDCGITAGKEVS
DINKQGIDVIVTDHHMPTGKIPHCVATLNPKLRDHAYPNKDLTGVGVAFKLARGVVDALQKNHPKLKLDIQHLLDLVSLG
TVTDVGTLLGENRTMVRHGIKEIAKGSRLGLHKLCIFSGVNPSEVTSTDIVLKISPKLNSLGRLADASKGVELLLTKDPE
VADDIIQYLDKINRERQKIEADVFHDVQKILKNHPDIVKQAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGVG
KGSLRTIGSFPLLGILQKCSPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDHD
LLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDRIGALKASWNQPLELAYTPRLS
QSANGGVIHLLVRDFHILPLNYKDTTAKF

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=532, Percent_Identity=30.2631578947368, Blast_Score=199, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 65426; Mature: 65295

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKDNSSVSSPIWIYPKHDPALLSFIIKEFHLHPVAAQTFISRGFQTIDEVRDFLYVHL
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLHDPELLLDMSKAVQRLLLAKERREHVMVYGDSDVDGITGVALLVEFLRSIEIKVSYC
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLGAFLKHYGELSLLIAKMKEEGVTLLITVDCGITAGKEVSDINKQGIDVIVTDHHMPTG
HHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCC
KIPHCVATLNPKLRDHAYPNKDLTGVGVAFKLARGVVDALQKNHPKLKLDIQHLLDLVSL
CCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
GTVTDVGTLLGENRTMVRHGIKEIAKGSRLGLHKLCIFSGVNPSEVTSTDIVLKISPKLN
CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHCCCCEEEEEECCCHH
SLGRLADASKGVELLLTKDPEVADDIIQYLDKINRERQKIEADVFHDVQKILKNHPDIVK
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGVGKGSLRTIGSFPLLGILQKC
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHC
SPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDH
CCEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
DLLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDR
HHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCH
IGALKASWNQPLELAYTPRLSQSANGGVIHLLVRDFHILPLNYKDTTAKF
HHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCC
>Mature Secondary Structure 
ASKDNSSVSSPIWIYPKHDPALLSFIIKEFHLHPVAAQTFISRGFQTIDEVRDFLYVHL
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLHDPELLLDMSKAVQRLLLAKERREHVMVYGDSDVDGITGVALLVEFLRSIEIKVSYC
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLGAFLKHYGELSLLIAKMKEEGVTLLITVDCGITAGKEVSDINKQGIDVIVTDHHMPTG
HHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCC
KIPHCVATLNPKLRDHAYPNKDLTGVGVAFKLARGVVDALQKNHPKLKLDIQHLLDLVSL
CCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
GTVTDVGTLLGENRTMVRHGIKEIAKGSRLGLHKLCIFSGVNPSEVTSTDIVLKISPKLN
CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHCCCCEEEEEECCCHH
SLGRLADASKGVELLLTKDPEVADDIIQYLDKINRERQKIEADVFHDVQKILKNHPDIVK
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGVGKGSLRTIGSFPLLGILQKC
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHC
SPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDH
CCEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
DLLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDR
HHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCH
IGALKASWNQPLELAYTPRLSQSANGGVIHLLVRDFHILPLNYKDTTAKF
HHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]