| Definition | Bacteroides fragilis NCTC 9343 chromosome, complete genome. |
|---|---|
| Accession | NC_003228 |
| Length | 5,205,140 |
Click here to switch to the map view.
The map label for this gene is typA
Identifier: 60683676
GI number:
Start: 5052358
End: 5054157
Strand: Reverse
Name: typA
Synonym: BF4258
Alternate gene names: NA
Gene position: NA
Preceding gene: 60683680
Following gene: 60683671
Centisome position: NA
GC content: NA
Gene sequence:
>1800_bases ATGCAAAATATTCGAAACATTGCAATTATTGCCCATGTTGACCATGGGAAAACGACTCTCGTCGATAAAATGCTTTTAGC CGGAAACTTGTTTCGCGGCAACCAAACAAGCGGAGAATTAATTCTGGATAACAACGACTTGGAGCGTGAACGAGGGATAA CGATCCTCTCTAAAAACGTTTCTATCAATTACAACGGAACTAAGATTAATATTATTGATACTCCGGGACACAGCGACTTC GGTGGCGAAGTAGAGCGTGTGCTCAACATGGCCGACGGATGCATTCTGTTGGTTGATGCTTTTGAAGGCCCGATGCCGCA AACGCGCTTTGTGCTGCAGAAAGCTTTGGAAATCGGATTGAAACCGATTGTTGTTATTAATAAGGTAGACAAACCGAACT GTCGTCCGGACGAAGTACACGAGATGGTCTTCGACCTGATGTTCAGCCTGGATGCTACCGAAGAGCAACTTGATTTTCCG ACAATCTATGGTTCGGCCAAGAATAACTGGATGAGTACGGACTGGAAAGAGCAGACGGACAGTATTGTGCCTTTGCTGGA TTGTATTGTAGAGAACATTCCTGCTCCGGAGCAATTGGAGGGTACTCCTCAGATGCTGATCACTTCACTTGACTATTCTT CATATACAGGCCGTATTGCTGTAGGGCGTGTTCATCGTGGTACACTGAAAGAAGGCATGAACGTGTCTTTGGCTAAGCGT GACGGCAGCATTGTGAAATCTAAGATTAAAGAGGTTCATGTATTCGAAGGGCTGGGTCGTGTGAAGACGACTGAGGTCTC TTCGGGAGATATTTGCGCTTTGGTAGGTATTGACGGATTCGAGATCGGAGATACGATCTGTGATTATGAAACTCCGGAAG CATTGCCACCTATTGCTATCGATGAACCGACTATGAGTATGCTGTTTGCCATCAACGACTCTCCGTTCTATGGTAAAGAT GGTAAATTTGTAACTTCACGTCATATCCATGATCGCCTGACCAAGGAATTGGATAAGAATCTGGCTTTGCGCGTACGTAA GAGCGAAGAAGACGGTAAATGGGTTGTATCAGGCCGTGGTGTGCTTCACCTTTCTGTCTTGATCGAAACCATGCGTCGCG AAGGTTACGAGTTACAGGTCGGACAGCCGCAAGTAATCTATAAAGAAATAGATGGAGTAAAATGTGAACCGATTGAGGAG CTTACGATTAACGTACCTGAAGAATATTCAAGTAAGATCATCGATATGGTAACCCGCCGTAAAGGTGAGATGACTATGAT GGAGAATACCGGTGAACGCATCAACCTTGAATTTGATATGCCTTCGCGTGGTATCATCGGTCTTCGTACGAATGTTCTGA CGGCTTCGGCAGGTGAGGCTATCATGGCACACCGCTTTAAGGAATATCAGCCGTTCAAAGGAGACATAGAACGTCGTACC AATGGTTCGATTATCGCTATGGAGAGTGGTACTGCATTTGCTTATGCTATCGACAAATTGCAGGATCGTGGTAAATTCTT TATTTTCCCTCAGGAAGAGGTGTATGCAGGTCAGGTAGTGGGTGAGCATGCTCACGAAAAAGATTTGGTTGTAAATGTGA CTAAGTCGAAGAAGTTGACTAATATGCGTGCTTCCGGTTCTGACGAGAAAGCCCGTTTGATTCCTCCTGTACAGTTCTCT CTTGAAGAGGCCTTGGAATACATTAAGGAAGACGAATATGTAGAAGTTACTCCGAAAGCAATGCGTATGCGTAAGGTTAT TCTGGATGAAACTGAACGTAAACGCGCCAATAAGAGCTAA
Upstream 100 bases:
>100_bases TTATCTTTTATCCCACAATGAATTGCAGGAAATATTTTCTATAGTATCCCTTTTTTCTAATCCAATTTTTGTACCTTTGT CGCCAAATAATAGGTATTAT
Downstream 100 bases:
>100_bases TATTTGCGGATATCTATCTAACGAAAGGCTGTGTAATTTGGCACAGCCTTTTCTGTTTATATATGCTTTTTTTTCCTATA TAATAATATAAAAAAGGACA
Product: putative GTP-binding elongation factor family protein TypA/BipA
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>599_residues MQNIRNIAIIAHVDHGKTTLVDKMLLAGNLFRGNQTSGELILDNNDLERERGITILSKNVSINYNGTKINIIDTPGHSDF GGEVERVLNMADGCILLVDAFEGPMPQTRFVLQKALEIGLKPIVVINKVDKPNCRPDEVHEMVFDLMFSLDATEEQLDFP TIYGSAKNNWMSTDWKEQTDSIVPLLDCIVENIPAPEQLEGTPQMLITSLDYSSYTGRIAVGRVHRGTLKEGMNVSLAKR DGSIVKSKIKEVHVFEGLGRVKTTEVSSGDICALVGIDGFEIGDTICDYETPEALPPIAIDEPTMSMLFAINDSPFYGKD GKFVTSRHIHDRLTKELDKNLALRVRKSEEDGKWVVSGRGVLHLSVLIETMRREGYELQVGQPQVIYKEIDGVKCEPIEE LTINVPEEYSSKIIDMVTRRKGEMTMMENTGERINLEFDMPSRGIIGLRTNVLTASAGEAIMAHRFKEYQPFKGDIERRT NGSIIAMESGTAFAYAIDKLQDRGKFFIFPQEEVYAGQVVGEHAHEKDLVVNVTKSKKLTNMRASGSDEKARLIPPVQFS LEEALEYIKEDEYVEVTPKAMRMRKVILDETERKRANKS
Sequences:
NA
Specific function: NA
COG id: COG1217
COG function: function code T; Predicted membrane GTPase involved in stress response
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA