Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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The map label for this gene is rpoB

Identifier: 60683450

GI number:

Start: 4718525

End: 4722337

Strand: Reverse

Name: rpoB

Synonym: BF4015

Alternate gene names: NA

Gene position: NA

Preceding gene: 60683451

Following gene: 60683449

Centisome position: NA

GC content: NA

Gene sequence:

>3813_bases
ATGTCTTCAAATACTGTAAATCAAAGAGTTAATTTTGCTTCGACTAAGAATCCGCTTGAATATCCGGATTTCCTGGAAGT
ACAATTGAAGTCATTCCAAGACTTTCTACAACTAGATACCCCACCTGAGAAGCGTAAAAAAGAGGGATTGTATAAAGTAT
TTGCCGAAAACTTCCCAATTGCCGACACAAGAAACAATTTTGTTCTTGAGTTTCTGGACTATTATATTGATCCGCCGCGC
TATACCATTGATGATTGTATAGAGCGTGGGCTCACATATAGTGTTCCATTGAAAGCGAAACTCAAGCTTTACTGTACAGA
CCCCGATCATGAGGATTTCGATACAGTGATTCAAGATGTGTTCCTTGGTCCTATACCTTACATGACTGACAAGGCAACTT
TTGTCATCAATGGTGCTGAGCGTGTAGTTGTGTCGCAGCTTCACCGTTCTCCGGGCGTATTCTTCGGTCAGAGTGTACAT
GCTAATGGTACAAAGTTGTACTCAGCCCGTATCATCCCGTTTAAGGGATCATGGATTGAGTTCGCTACCGATATTAACAA
CGTAATGTACGCTTATATTGATCGTAAGAAGAAATTGCCTGTTACTACGCTGTTAAGAGCTATCGGCTTTGAGAACGACA
AGGACATTCTTGAGATTTTTAACCTGGCTGAAGATGTGAAGGTTAATAAGACTAATCTCAAGAAGGTAGTAGGTCGTAAA
CTGGCTGCGCGTGTCTTGAAAACCTGGATTGAAGATTTCGTTGATGAAGATACCGGTGAAGTTGTTTCTATTGAACGTAA
TGAAGTCATTATCGACCGTGAAACAGTAATCGAACCGGAACATATAGATGAAATAATTGACTCGGGCGTTCAAAACATCC
TTATTCACAAGGAAGAACCGAACCAGTCCGACTACTCTATTATATATAATACCCTTCAGAAGGACCCGAGTAACTCGGAA
AAGGAGGCTGTGCTTTATATCTACCGTCAGTTGCGTAATGCAGACCCTGCCGATGATGCCAGTGCCCGTGAAGTTATTAA
TAACCTGTTCTTCTCTGAAAAACGGTATGACCTTGGTGATGTAGGTCGTTATAGAATCAATAAGAAATTGAACCTGACGA
CAGACATGGACGTGCGTGTCCTCACTAAAGAAGATATTATCGAGATCATCAAATATCTGATTGAGCTGATTAACTCAAAA
GCAGATGTAGATGATATCGACCACTTGAGCAACCGTCGCGTACGTACTGTAGGCGAACAGTTGTCCAATCAGTTCGCTGT
CGGTTTGGCACGTATGTCACGTACCATCCGCGAACGAATGAACGTTCGTGACAATGAGGTGTTTACTCCGATTGACTTGA
TCAATGCGAAGACTATTTCTTCTGTGATCAATTCATTCTTCGGAACTAACGCATTGTCACAGTTTATGGACCAGACAAAC
CCGTTGGCTGAAATCACTCACAAACGTCGTATGTCTGCTCTTGGTCCTGGTGGTTTGTCTCGTGAACGTGCCGGATTTGA
GGTTCGTGACGTTCACTATACACACTACGGACGCCTTTGTCCGATTGAAACACCGGAAGGTCCGAATATCGGTTTGATTT
CGTCACTTTGTGTGTTTGCCAAGATCAATGATCTCGGCTTTATTGAAACTCCTTACCGTAAGGTAGATAACGGAAAGGTA
GATCTGTCTGAGAACGGACTCGTTTACCTGACGGCTGAGGAAGAAGAAGCTAAGATCATAGCACAGGGTAATGCTCCGTT
GAATGATGACGGTACATTTATCCGTAATAAGGTTAAGTCTCGTCAGGATGCCGATTATCCGGTTGTAGAACCTTCGGAAG
TAGAGTTGATGGACGTTGCTCCTCAACAGATTGCTTCTATCGCTGCATCTTTGATTCCCTTCCTTGAACATGATGACGCT
AACCGTGCGTTGATGGGATCGAACATGATGCGCCAGGCTGTTCCTTTGCTGAGAAGTGAAGCTCCAATCGTAGGTACAGG
TATTGAACGCCAGTTGGTACGTGATTCACGTACTCAGATTGCTGCCGAAGGTGATGGAGTGATTGATTTTGTAGATGCTA
CTACTATTCGTATTCTATACGATCGTACAGAAGATGAAGAGTTTGTAAGTTTTGAGCCGGCATTAAAAGAATATAGAATA
CCGAAGTTCCGTAAAACGAACCAGAATATGACAATCGACCTTCGGCCAACTTGCAATAAAGGTGATCGTGTGACGAAAGG
TCAGATTCTGACAGAAGGTTATTCTACTGAAAATGGAGAACTCGCTTTGGGTAAGAATCTGTTGGTTGCTTACATGCCTT
GGAAAGGTTATAATTACGAGGATGCTATCGTGTTGAATGAACGTGTGGTTCGTGAAGACTTGCTGACTTCAGTACACGTA
GAAGAGTATTCACTCGAAGTTCGTGAAACCAAGCGAGGAATGGAAGAGTTGACTTCTGATATTCCTAACGTGAGTGAGGA
AGCCACTAAGGATTTGGACGAGAATGGTATCGTACGTGTCGGTGCACGTATTCAGCCGGGTGATATATTGATTGGTAAGA
TTACACCGAAAGGTGAATCTGATCCTTCTCCGGAAGAAAAATTGCTTCGTGCTATCTTTGGTGATAAAGCCGGTGATGTG
AAAGATGCTTCTTTGAAAGCATCTCCTTCTCTGAAGGGGGTAATTATTGATAAGAAACTGTTCTCACGTGTCATCAAGAA
TCGTAGTTCTAAGTTGGCTGATAAGGCGTTGCTTCCGAAAATTGACGATGAATTTGAGTCTAAGGTAGCTGACTTGAAAC
GTATCTTGGTAAAGAAATTGATGGTATTGACAGAAGGAAAGGTATCTCAGGGCGTGAAAGACTACTTGGGAGCTGAAGTC
ATAGCTAAAGGCTCTAAGTTTAGTGCTTCTGACTTCGATTCACTTGATTTCACTGCGATTCAGCTGAGCGACTGGACCAA
TGATGATCATGCGAATGGTATGATTCGTGACTTGATCCTGAACTTTATCAAGAAGTACAAAGAACTTGATGCTGAACTGA
AGCGTAAAAAGTTCGCTATCACAATTGGTGATGAACTGCCTGCAGGTATCATTCAGATGGCGAAAGTATATATTGCTAAA
AAACGTAAGATTGGTGTAGGTGATAAGATGGCCGGACGTCACGGTAATAAAGGTATTGTGTCACGTGTTGTTCGTCAAGA
AGACATGCCGTTCCTTGAAGATGGAACTCCGGTAGACATTGTATTGAACCCGTTGGGTGTGCCTTCTCGTATGAATATCG
GTCAGATTTTTGAGGCTGTTCTCGGACGTGCCGGAAAGAATTTGGGTGTGAAGTTCGCTACGCCGATTTTTGACGGTGCA
ACTTTGGATGACTTGAACGAGTGGACAGACAAAGCCGGTCTACCACGCTATTGCAAAACTTATCTTTGTGATGGTGGTAC
AGGCGAACGCTTTGACCAACCAGCAACCGTAGGTGTTACCTATATGTTGAAACTCGGTCACATGGTTGAAGACAAGATGC
ACGCACGTTCTATCGGACCATACTCATTGATTACTCAGCAACCTCTTGGTGGTAAAGCTCAGTTTGGTGGTCAGCGTTTC
GGAGAGATGGAGGTTTGGGCACTCGAAGGTTTCGGTGCATCGCATATTCTCCAGGAGATTCTGACAATCAAGTCGGACGA
CGTTGTTGGACGTTCTAAGGCTTACGAAGCCATTGTAAAGGGCGAACCCATGCCACAGCCGGGTATTCCGGAATCTCTGA
ACGTGTTGTTGCACGAATTAAGAGGATTGGGCCTGAGCATCAATTTGGAATAA

Upstream 100 bases:

>100_bases
AGCCTGGTTATCAGGTAATTCGGTTAAGAATCCTTCACAAGAGGATTCTTAACCTTTTTGTGTATATATTTAAAATTAAG
TTCTCCAAATTCATTGACAG

Downstream 100 bases:

>100_bases
TGAACTAATGTGCCAATATGCCAATGTATCGATCAAGGTACATTGGCTGTGGCATTTCATAATTAGCATATTTTCTTATT
GGCACATTGGCATCAGCCAA

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1270_residues
MSSNTVNQRVNFASTKNPLEYPDFLEVQLKSFQDFLQLDTPPEKRKKEGLYKVFAENFPIADTRNNFVLEFLDYYIDPPR
YTIDDCIERGLTYSVPLKAKLKLYCTDPDHEDFDTVIQDVFLGPIPYMTDKATFVINGAERVVVSQLHRSPGVFFGQSVH
ANGTKLYSARIIPFKGSWIEFATDINNVMYAYIDRKKKLPVTTLLRAIGFENDKDILEIFNLAEDVKVNKTNLKKVVGRK
LAARVLKTWIEDFVDEDTGEVVSIERNEVIIDRETVIEPEHIDEIIDSGVQNILIHKEEPNQSDYSIIYNTLQKDPSNSE
KEAVLYIYRQLRNADPADDASAREVINNLFFSEKRYDLGDVGRYRINKKLNLTTDMDVRVLTKEDIIEIIKYLIELINSK
ADVDDIDHLSNRRVRTVGEQLSNQFAVGLARMSRTIRERMNVRDNEVFTPIDLINAKTISSVINSFFGTNALSQFMDQTN
PLAEITHKRRMSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLCVFAKINDLGFIETPYRKVDNGKV
DLSENGLVYLTAEEEEAKIIAQGNAPLNDDGTFIRNKVKSRQDADYPVVEPSEVELMDVAPQQIASIAASLIPFLEHDDA
NRALMGSNMMRQAVPLLRSEAPIVGTGIERQLVRDSRTQIAAEGDGVIDFVDATTIRILYDRTEDEEFVSFEPALKEYRI
PKFRKTNQNMTIDLRPTCNKGDRVTKGQILTEGYSTENGELALGKNLLVAYMPWKGYNYEDAIVLNERVVREDLLTSVHV
EEYSLEVRETKRGMEELTSDIPNVSEEATKDLDENGIVRVGARIQPGDILIGKITPKGESDPSPEEKLLRAIFGDKAGDV
KDASLKASPSLKGVIIDKKLFSRVIKNRSSKLADKALLPKIDDEFESKVADLKRILVKKLMVLTEGKVSQGVKDYLGAEV
IAKGSKFSASDFDSLDFTAIQLSDWTNDDHANGMIRDLILNFIKKYKELDAELKRKKFAITIGDELPAGIIQMAKVYIAK
KRKIGVGDKMAGRHGNKGIVSRVVRQEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIFEAVLGRAGKNLGVKFATPIFDGA
TLDDLNEWTDKAGLPRYCKTYLCDGGTGERFDQPATVGVTYMLKLGHMVEDKMHARSIGPYSLITQQPLGGKAQFGGQRF
GEMEVWALEGFGASHILQEILTIKSDDVVGRSKAYEAIVKGEPMPQPGIPESLNVLLHELRGLGLSINLE

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA