Click here to switch to the map view.

The map label for this gene is yibL [H]

Identifier: 59714337

GI number: 59714337

Start: 1296867

End: 1297223

Strand: Reverse

Name: yibL [H]

Synonym: VF_A1154

Alternate gene names: 59714337

Gene position: 1297223-1296867 (Counterclockwise)

Preceding gene: 59714342

Following gene: 59714336

Centisome position: 97.51

GC content: 38.1

Gene sequence:

>357_bases
ATGAGTGTAAAAGAAGAACTGCAAAAAATTCATAACCGTTTAGATCGTTGTAAGCACCGTTTAGCGGCTGCGCAAAAGCG
TGATGATCAACCAGTCGTTAAGCAATTCTTGCATGAAATTCAAACGCTTGAAAAGAAACTAACAAAGCTTAAAGGTAAGC
AACAGTTTGAAACAGGTAATAAAGGTACTGAAGTACGTAACCTAGCTTTCAATCGTGCAATCACTAAAGCTGAACAAGCT
GATATGGGTAAACTTAAAAAATCAGTTCGTGGTTTAGTTGTTGTTCACCCAATGACAGCACTAGGTAAAGAGCTTGGCCT
TAAAGAAATGACAGGTTATGCACCACAAGCATTCTAA

Upstream 100 bases:

>100_bases
GAGATGGTTAGCATGTAATAAACCTATGATCGTTGTTCTAATAGAGGGTATACTACCAGTTAGCGTCAATGCGCACCATT
TTCAATACAAAGGTAATTTC

Downstream 100 bases:

>100_bases
TTATAGAGTGTACTCAGTTTAGAAGGCATCGGGTGTCAGTTCACTCGATGCCTTTTTCTTTTTTTCGCTATTTCTGATCA
CAGATTGTGATTGGTATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSVKEELQKIHNRLDRCKHRLAAAQKRDDQPVVKQFLHEIQTLEKKLTKLKGKQQFETGNKGTEVRNLAFNRAITKAEQA
DMGKLKKSVRGLVVVHPMTALGKELGLKEMTGYAPQAF

Sequences:

>Translated_118_residues
MSVKEELQKIHNRLDRCKHRLAAAQKRDDQPVVKQFLHEIQTLEKKLTKLKGKQQFETGNKGTEVRNLAFNRAITKAEQA
DMGKLKKSVRGLVVVHPMTALGKELGLKEMTGYAPQAF
>Mature_117_residues
SVKEELQKIHNRLDRCKHRLAAAQKRDDQPVVKQFLHEIQTLEKKLTKLKGKQQFETGNKGTEVRNLAFNRAITKAEQAD
MGKLKKSVRGLVVVHPMTALGKELGLKEMTGYAPQAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790030, Length=115, Percent_Identity=45.2173913043478, Blast_Score=99, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021230 [H]

Pfam domain/function: PF10928 DUF2810 [H]

EC number: NA

Molecular weight: Translated: 13395; Mature: 13264

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKEELQKIHNRLDRCKHRLAAAQKRDDQPVVKQFLHEIQTLEKKLTKLKGKQQFETGN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
KGTEVRNLAFNRAITKAEQADMGKLKKSVRGLVVVHPMTALGKELGLKEMTGYAPQAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCHHHHHCCCCCCC
>Mature Secondary Structure 
SVKEELQKIHNRLDRCKHRLAAAQKRDDQPVVKQFLHEIQTLEKKLTKLKGKQQFETGN
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
KGTEVRNLAFNRAITKAEQADMGKLKKSVRGLVVVHPMTALGKELGLKEMTGYAPQAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]