| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is yieF [C]
Identifier: 59714291
GI number: 59714291
Start: 1250705
End: 1251226
Strand: Reverse
Name: yieF [C]
Synonym: VF_A1108
Alternate gene names: 59714291
Gene position: 1251226-1250705 (Counterclockwise)
Preceding gene: 59714293
Following gene: 59714290
Centisome position: 94.05
GC content: 39.08
Gene sequence:
>522_bases ATGAAAATTTTAGCATTAGCAGCAAGCAGCAGTTCAACATCAATTAACAAACAACTAGCAACGTATGCAGCAGGTTTGGT TGCCGGTGCTGAAGTAGAAGTGCTAGACATTAATGATTATGAAATGCCTATCTTTAGTGAAGATAAAGAAAAAGAAATCG GTCAACCAGAGCAAGCGAAGCGCTTCTTCCAAAAAATTGGTGAAGCGGATGCGATTGTCATTTCTTATGCTGAACATAAT GGCTCTTATGCTACAGCGTTTAAGAATGTGTTTGATTGGACTTCTCGTATTGATATGAAAGTGTACCAAGGTAAACCTGT TGTGATGTTAGCAACATCTCCTGGTCCTGGTGGTGCTGCAACAGTATTAGCAGCAGCTACAGGATCTGCGCCTTACTTTG CTGCAGATGTTAAAGGTTCACTATCTGTTCCAAGTTTTTACGATAACTTTGATATGGAAAAAGGTGAGCTGCGTAATGAA GCATTGATTGCTGAGTTAAAAACAATCATGTCAGTATTATAA
Upstream 100 bases:
>100_bases AATGAATTATAGTTATTCCATCGCAAACAAGAACAATAGATTTGAAAAGAGCAGAGCATTAACTACTCTTTTTACTTAAA TAGAATATGAAGGTATCCCG
Downstream 100 bases:
>100_bases GTTTTCATGAAAATAGAGGCGTATCCATTTGATGGATGCGCTTTTTTTTATACAAGAAAACCGCAGATTGAAAACAAAAA GACTAATTTATAAATTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKILALAASSSSTSINKQLATYAAGLVAGAEVEVLDINDYEMPIFSEDKEKEIGQPEQAKRFFQKIGEADAIVISYAEHN GSYATAFKNVFDWTSRIDMKVYQGKPVVMLATSPGPGGAATVLAAATGSAPYFAADVKGSLSVPSFYDNFDMEKGELRNE ALIAELKTIMSVL
Sequences:
>Translated_173_residues MKILALAASSSSTSINKQLATYAAGLVAGAEVEVLDINDYEMPIFSEDKEKEIGQPEQAKRFFQKIGEADAIVISYAEHN GSYATAFKNVFDWTSRIDMKVYQGKPVVMLATSPGPGGAATVLAAATGSAPYFAADVKGSLSVPSFYDNFDMEKGELRNE ALIAELKTIMSVL >Mature_173_residues MKILALAASSSSTSINKQLATYAAGLVAGAEVEVLDINDYEMPIFSEDKEKEIGQPEQAKRFFQKIGEADAIVISYAEHN GSYATAFKNVFDWTSRIDMKVYQGKPVVMLATSPGPGGAATVLAAATGSAPYFAADVKGSLSVPSFYDNFDMEKGELRNE ALIAELKTIMSVL
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 18543; Mature: 18543
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILALAASSSSTSINKQLATYAAGLVAGAEVEVLDINDYEMPIFSEDKEKEIGQPEQAK CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHCCCHHHHH RFFQKIGEADAIVISYAEHNGSYATAFKNVFDWTSRIDMKVYQGKPVVMLATSPGPGGAA HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCE TVLAAATGSAPYFAADVKGSLSVPSFYDNFDMEKGELRNEALIAELKTIMSVL EEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKILALAASSSSTSINKQLATYAAGLVAGAEVEVLDINDYEMPIFSEDKEKEIGQPEQAK CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHCCCHHHHH RFFQKIGEADAIVISYAEHNGSYATAFKNVFDWTSRIDMKVYQGKPVVMLATSPGPGGAA HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCE TVLAAATGSAPYFAADVKGSLSVPSFYDNFDMEKGELRNEALIAELKTIMSVL EEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]