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The map label for this gene is 59714285

Identifier: 59714285

GI number: 59714285

Start: 1243849

End: 1244652

Strand: Reverse

Name: 59714285

Synonym: VF_A1102

Alternate gene names: NA

Gene position: 1244652-1243849 (Counterclockwise)

Preceding gene: 59714290

Following gene: 59714284

Centisome position: 93.56

GC content: 35.2

Gene sequence:

>804_bases
ATGGCTTATGTAGAACCAATAAAAAACAAAGAGCATTTAAAGTATGCGGCAAAATATTTACAGAAGAATCATGATCCTGC
ATTTTCATTAATTTGGAATATTGGACTTGAGACAGGATTACGGATCAGCGATATATTAAGATTAAAATATTCTGATATTG
ATTTTAGAAGCGGTCATTGTGAAGTTATTGAAAGTAAAGGTACATTAGCACGTAAAGCAAGAGCCAAACATCGGGTACTT
AAACAAGTTAAAGAGGAACTTATTCTTCATTACCAACATAACGTTAAAAAATTGACGGCAACGTACATAACCCCATTTTA
TCAAATTGAAAAACTGCTTCCTAAAGAGTGGATATTAATGGTGAATGAAAGGGTTTCTGCAGCTAAAAAAGCGACACCAC
CCGTAACTCGCTCCTTCTTATTCAGTAAAAAAATGGTTTTTATGCTTAAGCAAAGAAAGGAGAAGTTTAGACACATTAAC
AGCGATTCTGTTTTTAGTCGTAAAACATTACTGAGTAATAGAGCTAAAGGGGTGGATGGTTTATTAACTCGTCAGGCTTG
CTGGACTGTGTTTTCTAAGCTTACTCAGGTGTTAGAGAAAATAGGGAGTACAGCTAAAGTAGGGTGTCATACATTAAGGA
AGAGTTTTGCGAGGCATTTATATTTCGCAACAGGTAAGGACATTAGTCTTGTCATGACCACCATAGGGCATAAATCAGAA
AGTGTCAGCTTAAGGTATATAGGTGTATCAGACGATGATATTAAATTGGCTCAAAAGACACTTATTACCTATTTATCGAG
CTAA

Upstream 100 bases:

>100_bases
ACTATACTGATATTATTGTTATTAACTTCTTGGGTATGTTAGCTTATAAAATTATCAGTTAATATAACCAACTTACAGCC
ATAAATAGAGGAGCAAAGTA

Downstream 100 bases:

>100_bases
GTTTTATTTCTGTGACTCAATGCCAAAATAATGGCGCTTTTTATTGGGTTGGTAAATGTATTTATTGTTATTGATTGGTG
TTGTTTGTTGTAAATGGTGT

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAYVEPIKNKEHLKYAAKYLQKNHDPAFSLIWNIGLETGLRISDILRLKYSDIDFRSGHCEVIESKGTLARKARAKHRVL
KQVKEELILHYQHNVKKLTATYITPFYQIEKLLPKEWILMVNERVSAAKKATPPVTRSFLFSKKMVFMLKQRKEKFRHIN
SDSVFSRKTLLSNRAKGVDGLLTRQACWTVFSKLTQVLEKIGSTAKVGCHTLRKSFARHLYFATGKDISLVMTTIGHKSE
SVSLRYIGVSDDDIKLAQKTLITYLSS

Sequences:

>Translated_267_residues
MAYVEPIKNKEHLKYAAKYLQKNHDPAFSLIWNIGLETGLRISDILRLKYSDIDFRSGHCEVIESKGTLARKARAKHRVL
KQVKEELILHYQHNVKKLTATYITPFYQIEKLLPKEWILMVNERVSAAKKATPPVTRSFLFSKKMVFMLKQRKEKFRHIN
SDSVFSRKTLLSNRAKGVDGLLTRQACWTVFSKLTQVLEKIGSTAKVGCHTLRKSFARHLYFATGKDISLVMTTIGHKSE
SVSLRYIGVSDDDIKLAQKTLITYLSS
>Mature_266_residues
AYVEPIKNKEHLKYAAKYLQKNHDPAFSLIWNIGLETGLRISDILRLKYSDIDFRSGHCEVIESKGTLARKARAKHRVLK
QVKEELILHYQHNVKKLTATYITPFYQIEKLLPKEWILMVNERVSAAKKATPPVTRSFLFSKKMVFMLKQRKEKFRHINS
DSVFSRKTLLSNRAKGVDGLLTRQACWTVFSKLTQVLEKIGSTAKVGCHTLRKSFARHLYFATGKDISLVMTTIGHKSES
VSLRYIGVSDDDIKLAQKTLITYLSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30689; Mature: 30558

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CEEEEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYVEPIKNKEHLKYAAKYLQKNHDPAFSLIWNIGLETGLRISDILRLKYSDIDFRSGHC
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC
EVIESKGTLARKARAKHRVLKQVKEELILHYQHNVKKLTATYITPFYQIEKLLPKEWILM
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VNERVSAAKKATPPVTRSFLFSKKMVFMLKQRKEKFRHINSDSVFSRKTLLSNRAKGVDG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
LLTRQACWTVFSKLTQVLEKIGSTAKVGCHTLRKSFARHLYFATGKDISLVMTTIGHKSE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCC
SVSLRYIGVSDDDIKLAQKTLITYLSS
CEEEEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA