| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714240
Identifier: 59714240
GI number: 59714240
Start: 1191299
End: 1193161
Strand: Reverse
Name: 59714240
Synonym: VF_A1057
Alternate gene names: NA
Gene position: 1193161-1191299 (Counterclockwise)
Preceding gene: 59714242
Following gene: 59714238
Centisome position: 89.69
GC content: 40.53
Gene sequence:
>1863_bases ATGAATAAATTTGTAGAGAAAGAATCTGATTTTAGCAATATGGTGAATGCTCGTTTATCTCGTCGAGGTTTCTTGATGGG AACTGCGGCGGCAGGTGCTGGCGCTTTTTTGGCGTTAAACCCAGTAGCAAAAGCCATCGCTGGTAATATGAATAATGCGT TATTAAACTTTGAAGCCATTCCCACCTCTACAAGTGACTCTATTGTGCTTCCTAAAGGGTACAGTTGGAATACATTGATG TCTTGGGGAGACCCTATCTTTGTTAACGCTCCGAAATTTAATCCAAATGGAAAGCAAGATTCAAAAGCGCAAGCATTGCA ATTTGGTGATAACACAGATGGTATGAGTGTATTCCCATTATCAAACGATCGAGCGATTCTTGCAGTTAATAATGAATATA CTAATTATGAATTTCTGTTTGCTCACCAAGGCAAAGAAATGACAGCAGATGATGTAGCTAAAGCACAGGCGGCCGTGGGA ATTACCATTGTTGAAATTGTAAAAAAGAACGGTCAATGGACGATGGATTCAGCAGGCAAGGCAAATCGCCGTATAACAGC AAATACTGAAATGGAAGTGACTGGTCCTGCTGCGGGTCATGATTTACTAAAAACCAAAGCCGATCCTACGGGTAAAAAAG TGTTAGGTACCTTTAATAACTGTGCAAATGGTGAAACGCCTTGGGGTACTTATTTAACGTGCGAAGAAAATTTTAATGAT TTTTTTGGTTCAGAACAAAATGCAGAATTAACACCTGATGATAAGCGTTATGGTATTAAAGCAGAGCAAAGTGATTATCA ATGGCATAATTTTGATGATCGTTTTGATGTAGCGAAAAATCCAAATGAACCGAATCGTTTTGGGTGGGTGGTTGAAATTG ATCCAAATGATCCAACATCAACGCCATTAAAACGAACGGGACTAGGTCGATTTAAACATGAAAATGCTGCACTGGTTGTA AATGATGATGGCCATGTTGTGGTGTATCTTGGTGATGACGAACGTGGTGAACACCTTTATAAGTTCGTATCAAAAGATAA ATATCAAGAAGGGAATAACAGAGCAAATCGTAATCTCCTTGAAGAGGGCACCTTGTACGTTGCTAAATTTGCAATGAAAG ACGATAAGTTAGAAGGTGATGGCCAGTGGCTAGAGTTGACTTATGGTAAAAATGGGTTAACCAGAGAAAATGGGTTCAAT AGCCAAGCTGAAGTGATGATTTTTGCTCGCCGTGCGGCAACCCAAGTGGGGGCAACCACAATGGATAGACCTGAATGGGT TGCGGTTCATCCTGATAAAAAGCACGTATTTTGTACACTAACCAATAATAAATATCGAGGTGTAAAAGAAGGCCAAGACG TTGATGGTGTTAACCCTCGTGCTGAAAATCATTATGGACAAATTGTGCGTTGGGCACCAACTAATGCCAATCATGTTAGT GATACGTTCCAGTGGGATTTATACGTAATTGCGGGTAATCCAACGGTTCATAAAGATAGTTTGTACGCTGGCAGTGATAA CATCAATAAAGATAATATGTTTAACAGTCCTGATGGTATTGGTTTTGATAAAGCAGGACGTTTATGGATCCAAACTGATG GTAATTACTCAAACAAAGGAGACTTTGCGGGACAAGGTAATAATCAGATGTTGTGTGGTGATCCTAATACTGGAGAAGTG CGTCGCTTCTTAACTGGCCCAATTGGTTGTGAAATTACTGGGTTAACTTTCTCTGAAGATCAAAAGACGATGTTTGTTGG TGTGCAACACCCATCTGGACATTTCCCACAAGGTGGAAACAGTAAGCCTCGGTCAACGATTGTGATGATCACCAAAGATA ACGGCGGCGTGATCGGCAGTTAG
Upstream 100 bases:
>100_bases TCGTCATCTCCTTTCAATATTTCTGTCACAAAGTACCTTTAGTCTACTTCTGATTGTAAAAATACACTTATAAAAATAAC AGTTTCAAAAGGGAAGTATG
Downstream 100 bases:
>100_bases AATCTTTTATTAGAAATATAAAAAAGTGGCCTCATAATAAGGCCACTTTAGTTGTAAATCTTTGGATTCGCAGTTATTAA CTTTCTACTTTTCTTCTTCT
Product: phosphatase
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MNKFVEKESDFSNMVNARLSRRGFLMGTAAAGAGAFLALNPVAKAIAGNMNNALLNFEAIPTSTSDSIVLPKGYSWNTLM SWGDPIFVNAPKFNPNGKQDSKAQALQFGDNTDGMSVFPLSNDRAILAVNNEYTNYEFLFAHQGKEMTADDVAKAQAAVG ITIVEIVKKNGQWTMDSAGKANRRITANTEMEVTGPAAGHDLLKTKADPTGKKVLGTFNNCANGETPWGTYLTCEENFND FFGSEQNAELTPDDKRYGIKAEQSDYQWHNFDDRFDVAKNPNEPNRFGWVVEIDPNDPTSTPLKRTGLGRFKHENAALVV NDDGHVVVYLGDDERGEHLYKFVSKDKYQEGNNRANRNLLEEGTLYVAKFAMKDDKLEGDGQWLELTYGKNGLTRENGFN SQAEVMIFARRAATQVGATTMDRPEWVAVHPDKKHVFCTLTNNKYRGVKEGQDVDGVNPRAENHYGQIVRWAPTNANHVS DTFQWDLYVIAGNPTVHKDSLYAGSDNINKDNMFNSPDGIGFDKAGRLWIQTDGNYSNKGDFAGQGNNQMLCGDPNTGEV RRFLTGPIGCEITGLTFSEDQKTMFVGVQHPSGHFPQGGNSKPRSTIVMITKDNGGVIGS
Sequences:
>Translated_620_residues MNKFVEKESDFSNMVNARLSRRGFLMGTAAAGAGAFLALNPVAKAIAGNMNNALLNFEAIPTSTSDSIVLPKGYSWNTLM SWGDPIFVNAPKFNPNGKQDSKAQALQFGDNTDGMSVFPLSNDRAILAVNNEYTNYEFLFAHQGKEMTADDVAKAQAAVG ITIVEIVKKNGQWTMDSAGKANRRITANTEMEVTGPAAGHDLLKTKADPTGKKVLGTFNNCANGETPWGTYLTCEENFND FFGSEQNAELTPDDKRYGIKAEQSDYQWHNFDDRFDVAKNPNEPNRFGWVVEIDPNDPTSTPLKRTGLGRFKHENAALVV NDDGHVVVYLGDDERGEHLYKFVSKDKYQEGNNRANRNLLEEGTLYVAKFAMKDDKLEGDGQWLELTYGKNGLTRENGFN SQAEVMIFARRAATQVGATTMDRPEWVAVHPDKKHVFCTLTNNKYRGVKEGQDVDGVNPRAENHYGQIVRWAPTNANHVS DTFQWDLYVIAGNPTVHKDSLYAGSDNINKDNMFNSPDGIGFDKAGRLWIQTDGNYSNKGDFAGQGNNQMLCGDPNTGEV RRFLTGPIGCEITGLTFSEDQKTMFVGVQHPSGHFPQGGNSKPRSTIVMITKDNGGVIGS >Mature_620_residues MNKFVEKESDFSNMVNARLSRRGFLMGTAAAGAGAFLALNPVAKAIAGNMNNALLNFEAIPTSTSDSIVLPKGYSWNTLM SWGDPIFVNAPKFNPNGKQDSKAQALQFGDNTDGMSVFPLSNDRAILAVNNEYTNYEFLFAHQGKEMTADDVAKAQAAVG ITIVEIVKKNGQWTMDSAGKANRRITANTEMEVTGPAAGHDLLKTKADPTGKKVLGTFNNCANGETPWGTYLTCEENFND FFGSEQNAELTPDDKRYGIKAEQSDYQWHNFDDRFDVAKNPNEPNRFGWVVEIDPNDPTSTPLKRTGLGRFKHENAALVV NDDGHVVVYLGDDERGEHLYKFVSKDKYQEGNNRANRNLLEEGTLYVAKFAMKDDKLEGDGQWLELTYGKNGLTRENGFN SQAEVMIFARRAATQVGATTMDRPEWVAVHPDKKHVFCTLTNNKYRGVKEGQDVDGVNPRAENHYGQIVRWAPTNANHVS DTFQWDLYVIAGNPTVHKDSLYAGSDNINKDNMFNSPDGIGFDKAGRLWIQTDGNYSNKGDFAGQGNNQMLCGDPNTGEV RRFLTGPIGCEITGLTFSEDQKTMFVGVQHPSGHFPQGGNSKPRSTIVMITKDNGGVIGS
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68317; Mature: 68317
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFVEKESDFSNMVNARLSRRGFLMGTAAAGAGAFLALNPVAKAIAGNMNNALLNFEAI CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECHHHHHHHCCCCCEEEEEEEC PTSTSDSIVLPKGYSWNTLMSWGDPIFVNAPKFNPNGKQDSKAQALQFGDNTDGMSVFPL CCCCCCCEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCCCHHHHEECCCCCCCEEEEEE SNDRAILAVNNEYTNYEFLFAHQGKEMTADDVAKAQAAVGITIVEIVKKNGQWTMDSAGK CCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEECCCCC ANRRITANTEMEVTGPAAGHDLLKTKADPTGKKVLGTFNNCANGETPWGTYLTCEENFND CCCEEEECCEEEEECCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCHH FFGSEQNAELTPDDKRYGIKAEQSDYQWHNFDDRFDVAKNPNEPNRFGWVVEIDPNDPTS HCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC TPLKRTGLGRFKHENAALVVNDDGHVVVYLGDDERGEHLYKFVSKDKYQEGNNRANRNLL CCHHHCCCCCEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCHH EEGTLYVAKFAMKDDKLEGDGQWLELTYGKNGLTRENGFNSQAEVMIFARRAATQVGATT HCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCC MDRPEWVAVHPDKKHVFCTLTNNKYRGVKEGQDVDGVNPRAENHYGQIVRWAPTNANHVS CCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC DTFQWDLYVIAGNPTVHKDSLYAGSDNINKDNMFNSPDGIGFDKAGRLWIQTDGNYSNKG CEEEEEEEEEECCCCEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC DFAGQGNNQMLCGDPNTGEVRRFLTGPIGCEITGLTFSEDQKTMFVGVQHPSGHFPQGGN CCCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCC SKPRSTIVMITKDNGGVIGS CCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MNKFVEKESDFSNMVNARLSRRGFLMGTAAAGAGAFLALNPVAKAIAGNMNNALLNFEAI CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECHHHHHHHCCCCCEEEEEEEC PTSTSDSIVLPKGYSWNTLMSWGDPIFVNAPKFNPNGKQDSKAQALQFGDNTDGMSVFPL CCCCCCCEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCCCHHHHEECCCCCCCEEEEEE SNDRAILAVNNEYTNYEFLFAHQGKEMTADDVAKAQAAVGITIVEIVKKNGQWTMDSAGK CCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEECCCCC ANRRITANTEMEVTGPAAGHDLLKTKADPTGKKVLGTFNNCANGETPWGTYLTCEENFND CCCEEEECCEEEEECCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCHH FFGSEQNAELTPDDKRYGIKAEQSDYQWHNFDDRFDVAKNPNEPNRFGWVVEIDPNDPTS HCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC TPLKRTGLGRFKHENAALVVNDDGHVVVYLGDDERGEHLYKFVSKDKYQEGNNRANRNLL CCHHHCCCCCEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCHH EEGTLYVAKFAMKDDKLEGDGQWLELTYGKNGLTRENGFNSQAEVMIFARRAATQVGATT HCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCC MDRPEWVAVHPDKKHVFCTLTNNKYRGVKEGQDVDGVNPRAENHYGQIVRWAPTNANHVS CCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC DTFQWDLYVIAGNPTVHKDSLYAGSDNINKDNMFNSPDGIGFDKAGRLWIQTDGNYSNKG CEEEEEEEEEECCCCEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC DFAGQGNNQMLCGDPNTGEVRRFLTGPIGCEITGLTFSEDQKTMFVGVQHPSGHFPQGGN CCCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCC SKPRSTIVMITKDNGGVIGS CCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA