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The map label for this gene is ybhB [H]

Identifier: 59714115

GI number: 59714115

Start: 1055100

End: 1055618

Strand: Reverse

Name: ybhB [H]

Synonym: VF_A0932

Alternate gene names: 59714115

Gene position: 1055618-1055100 (Counterclockwise)

Preceding gene: 59714116

Following gene: 59714114

Centisome position: 79.35

GC content: 40.27

Gene sequence:

>519_bases
ATGAACAAAGCATTATTAGTGTTACTTACTCTTGCATCATTTTCTAGCCACGCTTTTGAAGTATCAAGTTCAGATATACA
CGAAGGTCAATTGATGAATAGCAAGTTTACCTTCTCAGGTATGGGCTGTACTGGTGATAATATCTCTCCACAATTAAGTT
GGAAAGATGCGCCAAAAGGAACAAAAAGTTTTGCCATTACGGTATTTGATCCAGATGCACCTACAGGCAGTGGTTGGTGG
CATTGGTTAGCACTAAATATTCCTGCAAATGTACACAGCATTGAGCAAGGCTCGGCAATGAAAAATACATTACAAACTAA
GAATGACTTCGGTACGATGAGTTACGGTGGTGCTTGTCCTCCAGAAGGTGATGGCATGCACAGATACCAATATACAGTGT
GGGCATTACCACAAGAGAAAATCGATTTACCAGCAGACATTTCACCAGCAGTAGTTGGTTATACTTTAAATAGCATGGCG
TTAGACAAAGCGGTATTAACAGCAACGTATGTGCGTTAA

Upstream 100 bases:

>100_bases
ATTATCATTTGATACTTTATGTTGTCTTTTGGTTTGTTTTATTCGTAATAATGCTCCTGTACTTAATTAGAACACTCTAT
AAACAGTGAAGGAAATTATT

Downstream 100 bases:

>100_bases
TTGATAAGAATTAGGAGCATAAAATGAGTGACACACTGCTTAAGGTACAAACTTATTCAGGCGTTAATGATCAACATTTA
CGTAATGTTCATATTTATGC

Product: kinase inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNKALLVLLTLASFSSHAFEVSSSDIHEGQLMNSKFTFSGMGCTGDNISPQLSWKDAPKGTKSFAITVFDPDAPTGSGWW
HWLALNIPANVHSIEQGSAMKNTLQTKNDFGTMSYGGACPPEGDGMHRYQYTVWALPQEKIDLPADISPAVVGYTLNSMA
LDKAVLTATYVR

Sequences:

>Translated_172_residues
MNKALLVLLTLASFSSHAFEVSSSDIHEGQLMNSKFTFSGMGCTGDNISPQLSWKDAPKGTKSFAITVFDPDAPTGSGWW
HWLALNIPANVHSIEQGSAMKNTLQTKNDFGTMSYGGACPPEGDGMHRYQYTVWALPQEKIDLPADISPAVVGYTLNSMA
LDKAVLTATYVR
>Mature_172_residues
MNKALLVLLTLASFSSHAFEVSSSDIHEGQLMNSKFTFSGMGCTGDNISPQLSWKDAPKGTKSFAITVFDPDAPTGSGWW
HWLALNIPANVHSIEQGSAMKNTLQTKNDFGTMSYGGACPPEGDGMHRYQYTVWALPQEKIDLPADISPAVVGYTLNSMA
LDKAVLTATYVR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=179, Percent_Identity=46.3687150837989, Blast_Score=170, Evalue=5e-44,
Organism=Escherichia coli, GI1786990, Length=157, Percent_Identity=46.4968152866242, Blast_Score=148, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18633; Mature: 18633

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKALLVLLTLASFSSHAFEVSSSDIHEGQLMNSKFTFSGMGCTGDNISPQLSWKDAPKG
CCCCEEEEEEHHCCCCCEEEECCCCCCCCEEECCEEEEEECCCCCCCCCCEECCCCCCCC
TKSFAITVFDPDAPTGSGWWHWLALNIPANVHSIEQGSAMKNTLQTKNDFGTMSYGGACP
CCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PEGDGMHRYQYTVWALPQEKIDLPADISPAVVGYTLNSMALDKAVLTATYVR
CCCCCCEEEEEEEEECCHHHCCCCCCCCCEEEEEEECCHHHHHHHEEEEECC
>Mature Secondary Structure
MNKALLVLLTLASFSSHAFEVSSSDIHEGQLMNSKFTFSGMGCTGDNISPQLSWKDAPKG
CCCCEEEEEEHHCCCCCEEEECCCCCCCCEEECCEEEEEECCCCCCCCCCEECCCCCCCC
TKSFAITVFDPDAPTGSGWWHWLALNIPANVHSIEQGSAMKNTLQTKNDFGTMSYGGACP
CCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PEGDGMHRYQYTVWALPQEKIDLPADISPAVVGYTLNSMALDKAVLTATYVR
CCCCCCEEEEEEEEECCHHHCCCCCCCCCEEEEEEECCHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]