Definition Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession NC_006841
Length 1,330,333

Click here to switch to the map view.

The map label for this gene is 59714092

Identifier: 59714092

GI number: 59714092

Start: 1033488

End: 1034285

Strand: Reverse

Name: 59714092

Synonym: VF_A0909

Alternate gene names: NA

Gene position: 1034285-1033488 (Counterclockwise)

Preceding gene: 59714093

Following gene: 59714080

Centisome position: 77.75

GC content: 32.58

Gene sequence:

>798_bases
ATGTTTACTCAACGTCCCATTAAGCAAGCAAAAACGATTGATAACGTTTATGGTAGTGCTTTTTATCACCTTGAGGCAAA
AGATCGTACGATTGATGAATTGAGAAAAAAGCTAGAAGCAAAAACGGATAATCAAGAATGGATTGATACGGTTTTATCTG
ACCTTATTGGCCGTGGTTACCTTAAATCAGATAAGGATTTTGCTATTAATTTTGCTGAGATGGCATTCAATTCAGAAAAA
GGGAGTCAATTCATTTTATCTAAGTTAAAAGAAAAAGGGATAAATGAGTCAATAGCAAATGAGGCGATTGATTATTTGGT
CAATCGTGATGAAATTTGCGAATTTACTATATTGAACAATCGCTTAAGTAATATGACGTTAGATTCGTATTCAAGCGATA
AGCTATATGCAACCTTATTGAAATATGGCTTTAAATCCTCTGATGTAAGAGAAGTCATTAAGTCTCATCCTATTGCATCA
ACGCTTCCTTCTAAAATGCAAATCAAAGCAGAGAAAGCTGATATCGTTAAAGAAATAGAAAAGTTGGCTCGTAAGTTAAA
AGGAAAGTCCGTAATTAAACGAGAGCTTCAACAAAAACTGATTGATGTTACAAACTTTGATGCACAAATTGAAAAATTAG
AAATGGATGGTTCGATTGATTTTTATGAAAACTGCCAATTACGGTTAGATAAAAAACGCTTTGATTTGAGCAATTCAAAA
GAGAAAAGCAAAGCTTATGCTTACTTATATTCTCATGGATTTAGTTCAGATGAGATAAAAGAAACGCTGAATAACTAA

Upstream 100 bases:

>100_bases
TAATTAACGACAATATATCAGAGGTATTTTCAATTTGTCGTAGTAACCAAAGGCGAAGTGCTTTAGAGTCGGTAGATATT
TCATTGTCTTCGAGGTTTTT

Downstream 100 bases:

>100_bases
ATTGAGGTTAAGTGTTAGATGACGCGTATTGTGCGTCATCTAACAAACAAATTTAATTAATCAAATGTGTATTTATACGT
GATACCGAAGCGTTCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator For RecA; RecA Regulator RecX

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGYLKSDKDFAINFAEMAFNSEK
GSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNNRLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIAS
TLPSKMQIKAEKADIVKEIEKLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK
EKSKAYAYLYSHGFSSDEIKETLNN

Sequences:

>Translated_265_residues
MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGYLKSDKDFAINFAEMAFNSEK
GSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNNRLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIAS
TLPSKMQIKAEKADIVKEIEKLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK
EKSKAYAYLYSHGFSSDEIKETLNN
>Mature_265_residues
MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGYLKSDKDFAINFAEMAFNSEK
GSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNNRLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIAS
TLPSKMQIKAEKADIVKEIEKLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK
EKSKAYAYLYSHGFSSDEIKETLNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30549; Mature: 30549

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGY
CCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
LKSDKDFAINFAEMAFNSEKGSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNN
CCCCCCHHEEHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHC
RLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIASTLPSKMQIKAEKADIVKEIE
HHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
KLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHHEECHHHHCCCCCH
EKSKAYAYLYSHGFSSDEIKETLNN
HHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGY
CCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
LKSDKDFAINFAEMAFNSEKGSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNN
CCCCCCHHEEHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHC
RLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIASTLPSKMQIKAEKADIVKEIE
HHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
KLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHHEECHHHHCCCCCH
EKSKAYAYLYSHGFSSDEIKETLNN
HHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA