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The map label for this gene is tsr [C]

Identifier: 59714048

GI number: 59714048

Start: 976378

End: 978273

Strand: Reverse

Name: tsr [C]

Synonym: VF_A0865

Alternate gene names: 59714048

Gene position: 978273-976378 (Counterclockwise)

Preceding gene: 59714049

Following gene: 59714042

Centisome position: 73.54

GC content: 32.28

Gene sequence:

>1896_bases
GTGAATTTTAAGGATTTTAAATTAGATACAAAAATAACTGCAGTTTGTGTTTTATTAATTGTTGTAACTGCTTCAATATT
GACATCTATCTCTGCCAATAAGTTATATAAACAAACACATAATGAAATACTAGAACGTGCTCATGGTATAACTGTAACTG
CTGCAATGGGTCTTTCAGATTGGATCGAAATAAGAAAAAGAATTGCACATTCATTTCTGTCTAATTCAGCATCCCTCGAT
GATTTATCGAATAAACTAGATTTGATTCGCTCAACAACTAATTTTTCTGATGCTTATATTGGATTGAATTCAGGTGAAAT
GATCATTAACTCTGTGAATGCATTGCCACAAGATTATGATCCAAAAACTAGAGATTGGTATAAATTGGCAATGAAAGCTG
ATGGTCAGATTGTGACCTCTGCTTATAATGATGAACAAGTAGGCGAGTTGATGGTTACTATTGCAGAGCCTTTAAAGTCT
AAATTTTATCAGAATGGTGTATTTGCCGTTGATGTTCCTGTATCCCAATTGATAAGTAATGTAAATGCTTATAAAGTTGG
AAATAAAGGTTTTGCGGTGTTGGTTAATGGGCTAACTGGATCTTTTTTAGCTCATAATAATCCAAACATGATTTTAAAAC
CAGTTTCAAAAGCATACCCTGAATTATCTTTAACCGATATACGTGAACTCTCGAAAGTTAAGAATATAAAGCCAATTAAA
ATTGATGGTCAAGACAAGTATCTTTATTTTGAGAGAGTTAATGGTACCGATTGGTATATTGGTATTCAGTTGGATAAAAA
AATGGAAGAACAACCTTATAGACAGTTATTGAAAGAGTTATTACTGTGGACTTTGTTTATTTCTATCGCGGCTATATTGG
TTACTTATTCTTTTATTCGTATAGTAATGTCAGATTTAAAGAGAGTATCTTTAGCTTTATCCGATATTGCTAGTGGAGAT
GCTGATTTAACAAAAAGGATAATAAATACTAGTAATGATGAAGTAGGTTCACTTGTATCTAGTTTTAATAAATTTGTTGA
GAATACACATGTAATGGTTTCTAATCTTCATCAAATAATTAATAAAATGTTAGTTAATGCTCGTGAATCTTCAGAACTCA
TTGGTGAGCATAATATAAAGCTTGGATATCAACTTGATGAACTTAATATGATGGCAACGGCAGTTCATCAAATGTCAGCA
GCAACAATTGAGATTTCAAATAATGCTGAATTATCAGCTCAGACATCTAAAGACACTGTTATTATGTCAAGTGAGAGCTC
TCAATCAATTGCGTCCTCAATGAATCGGATTTCAGAAATGACTCAAGATATTCATGAAGCGAATCATCAAATTAATAAGT
TGCAAGATCAAAGCAATAGTATAAATACTATTGTCTTCACTATTCATAATATTGCAGAACAAACTAATTTACTTGCTTTA
AATGCAGCTATTGAAGCTGCGAGAGCTGGAATGCATGGTCGAGGATTTGCTGTTGTTGCGGATGAGGTTAGAATTCTTAG
CCAAAAAACGCAGTCTTCAACTCAAGAAATTAAACAAATGATAGAGTCTCTTCAGCTTGCTATCTTTGACGTCGTTTCTA
TTATGGGGAGGGCGTATAGCACTTCTAGTGAAAGTGTAAAGCAAGTTGAAAGAGATTTATCTGGTTTTTCTAACATTCAT
AGCTCAGTAGAAAATATCAATGATATGGCATATCAAATATCTACTGCAGCGGAAGAGCAAGCATCTGTTACTACGGAGTT
AAATCGAAATACATTAGGTATCAGAGATATATGTAATACGTTAGTAAATGATTCTCAAAAATCAGAAGAATATTCTAAGG
AAGTATTCGAACTAGCTTATATGTTAGAAAAAGAAATAAAGCGATTTAAAATTTAA

Upstream 100 bases:

>100_bases
CAATATTGACATTAATATCTGAATGTACTGGTGATAGTGGCGAACTTTATAATGAAATCAAAGTAGATACTTCACAGTTC
TATTTTAAGGAAACAATCAA

Downstream 100 bases:

>100_bases
AATTTATTTCTATTTAAAATAACTATGAAGTATGTTCAATTAATGGCCAAATAAAATTGGCCATTAATATCATTTTGTCA
AAATATATCTTAAGCTTACA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MNFKDFKLDTKITAVCVLLIVVTASILTSISANKLYKQTHNEILERAHGITVTAAMGLSDWIEIRKRIAHSFLSNSASLD
DLSNKLDLIRSTTNFSDAYIGLNSGEMIINSVNALPQDYDPKTRDWYKLAMKADGQIVTSAYNDEQVGELMVTIAEPLKS
KFYQNGVFAVDVPVSQLISNVNAYKVGNKGFAVLVNGLTGSFLAHNNPNMILKPVSKAYPELSLTDIRELSKVKNIKPIK
IDGQDKYLYFERVNGTDWYIGIQLDKKMEEQPYRQLLKELLLWTLFISIAAILVTYSFIRIVMSDLKRVSLALSDIASGD
ADLTKRIINTSNDEVGSLVSSFNKFVENTHVMVSNLHQIINKMLVNARESSELIGEHNIKLGYQLDELNMMATAVHQMSA
ATIEISNNAELSAQTSKDTVIMSSESSQSIASSMNRISEMTQDIHEANHQINKLQDQSNSINTIVFTIHNIAEQTNLLAL
NAAIEAARAGMHGRGFAVVADEVRILSQKTQSSTQEIKQMIESLQLAIFDVVSIMGRAYSTSSESVKQVERDLSGFSNIH
SSVENINDMAYQISTAAEEQASVTTELNRNTLGIRDICNTLVNDSQKSEEYSKEVFELAYMLEKEIKRFKI

Sequences:

>Translated_631_residues
MNFKDFKLDTKITAVCVLLIVVTASILTSISANKLYKQTHNEILERAHGITVTAAMGLSDWIEIRKRIAHSFLSNSASLD
DLSNKLDLIRSTTNFSDAYIGLNSGEMIINSVNALPQDYDPKTRDWYKLAMKADGQIVTSAYNDEQVGELMVTIAEPLKS
KFYQNGVFAVDVPVSQLISNVNAYKVGNKGFAVLVNGLTGSFLAHNNPNMILKPVSKAYPELSLTDIRELSKVKNIKPIK
IDGQDKYLYFERVNGTDWYIGIQLDKKMEEQPYRQLLKELLLWTLFISIAAILVTYSFIRIVMSDLKRVSLALSDIASGD
ADLTKRIINTSNDEVGSLVSSFNKFVENTHVMVSNLHQIINKMLVNARESSELIGEHNIKLGYQLDELNMMATAVHQMSA
ATIEISNNAELSAQTSKDTVIMSSESSQSIASSMNRISEMTQDIHEANHQINKLQDQSNSINTIVFTIHNIAEQTNLLAL
NAAIEAARAGMHGRGFAVVADEVRILSQKTQSSTQEIKQMIESLQLAIFDVVSIMGRAYSTSSESVKQVERDLSGFSNIH
SSVENINDMAYQISTAAEEQASVTTELNRNTLGIRDICNTLVNDSQKSEEYSKEVFELAYMLEKEIKRFKI
>Mature_631_residues
MNFKDFKLDTKITAVCVLLIVVTASILTSISANKLYKQTHNEILERAHGITVTAAMGLSDWIEIRKRIAHSFLSNSASLD
DLSNKLDLIRSTTNFSDAYIGLNSGEMIINSVNALPQDYDPKTRDWYKLAMKADGQIVTSAYNDEQVGELMVTIAEPLKS
KFYQNGVFAVDVPVSQLISNVNAYKVGNKGFAVLVNGLTGSFLAHNNPNMILKPVSKAYPELSLTDIRELSKVKNIKPIK
IDGQDKYLYFERVNGTDWYIGIQLDKKMEEQPYRQLLKELLLWTLFISIAAILVTYSFIRIVMSDLKRVSLALSDIASGD
ADLTKRIINTSNDEVGSLVSSFNKFVENTHVMVSNLHQIINKMLVNARESSELIGEHNIKLGYQLDELNMMATAVHQMSA
ATIEISNNAELSAQTSKDTVIMSSESSQSIASSMNRISEMTQDIHEANHQINKLQDQSNSINTIVFTIHNIAEQTNLLAL
NAAIEAARAGMHGRGFAVVADEVRILSQKTQSSTQEIKQMIESLQLAIFDVVSIMGRAYSTSSESVKQVERDLSGFSNIH
SSVENINDMAYQISTAAEEQASVTTELNRNTLGIRDICNTLVNDSQKSEEYSKEVFELAYMLEKEIKRFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=303, Percent_Identity=28.7128712871287, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=28, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787690, Length=281, Percent_Identity=29.1814946619217, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788194, Length=312, Percent_Identity=27.2435897435897, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1789453, Length=243, Percent_Identity=30.0411522633745, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 70305; Mature: 70305

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKDFKLDTKITAVCVLLIVVTASILTSISANKLYKQTHNEILERAHGITVTAAMGLSD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
WIEIRKRIAHSFLSNSASLDDLSNKLDLIRSTTNFSDAYIGLNSGEMIINSVNALPQDYD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
PKTRDWYKLAMKADGQIVTSAYNDEQVGELMVTIAEPLKSKFYQNGVFAVDVPVSQLISN
CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCC
VNAYKVGNKGFAVLVNGLTGSFLAHNNPNMILKPVSKAYPELSLTDIRELSKVKNIKPIK
CCCEEECCCCEEEEEECCCCCCEECCCCCEEEECHHHCCCCCCHHHHHHHHHHCCCCCEE
IDGQDKYLYFERVNGTDWYIGIQLDKKMEEQPYRQLLKELLLWTLFISIAAILVTYSFIR
ECCCCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVMSDLKRVSLALSDIASGDADLTKRIINTSNDEVGSLVSSFNKFVENTHVMVSNLHQII
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKMLVNARESSELIGEHNIKLGYQLDELNMMATAVHQMSAATIEISNNAELSAQTSKDTV
HHHHHCCCHHHHHHCCCCCEECEEEHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCEE
IMSSESSQSIASSMNRISEMTQDIHEANHQINKLQDQSNSINTIVFTIHNIAEQTNLLAL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCEEEH
NAAIEAARAGMHGRGFAVVADEVRILSQKTQSSTQEIKQMIESLQLAIFDVVSIMGRAYS
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSSESVKQVERDLSGFSNIHSSVENINDMAYQISTAAEEQASVTTELNRNTLGIRDICNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LVNDSQKSEEYSKEVFELAYMLEKEIKRFKI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFKDFKLDTKITAVCVLLIVVTASILTSISANKLYKQTHNEILERAHGITVTAAMGLSD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
WIEIRKRIAHSFLSNSASLDDLSNKLDLIRSTTNFSDAYIGLNSGEMIINSVNALPQDYD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
PKTRDWYKLAMKADGQIVTSAYNDEQVGELMVTIAEPLKSKFYQNGVFAVDVPVSQLISN
CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCC
VNAYKVGNKGFAVLVNGLTGSFLAHNNPNMILKPVSKAYPELSLTDIRELSKVKNIKPIK
CCCEEECCCCEEEEEECCCCCCEECCCCCEEEECHHHCCCCCCHHHHHHHHHHCCCCCEE
IDGQDKYLYFERVNGTDWYIGIQLDKKMEEQPYRQLLKELLLWTLFISIAAILVTYSFIR
ECCCCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVMSDLKRVSLALSDIASGDADLTKRIINTSNDEVGSLVSSFNKFVENTHVMVSNLHQII
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKMLVNARESSELIGEHNIKLGYQLDELNMMATAVHQMSAATIEISNNAELSAQTSKDTV
HHHHHCCCHHHHHHCCCCCEECEEEHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCEE
IMSSESSQSIASSMNRISEMTQDIHEANHQINKLQDQSNSINTIVFTIHNIAEQTNLLAL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCEEEH
NAAIEAARAGMHGRGFAVVADEVRILSQKTQSSTQEIKQMIESLQLAIFDVVSIMGRAYS
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSSESVKQVERDLSGFSNIHSSVENINDMAYQISTAAEEQASVTTELNRNTLGIRDICNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LVNDSQKSEEYSKEVFELAYMLEKEIKRFKI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA