| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is putP [H]
Identifier: 59714012
GI number: 59714012
Start: 931434
End: 932930
Strand: Reverse
Name: putP [H]
Synonym: VF_A0829
Alternate gene names: 59714012
Gene position: 932930-931434 (Counterclockwise)
Preceding gene: 59714013
Following gene: 59714011
Centisome position: 70.13
GC content: 40.15
Gene sequence:
>1497_bases ATGATTGAAAATAACTTTGCCATTACAGGCACTTTTATCGCTTACTTGATAATGATGTTAGCGATTGGGGTATACGCATA TAAACGAACGAGTAGCTCATCAGATTACTTTTTGGGTGGACGAACATTAGGTCCATGGCCGGCAGCATTGTCAGCTGGTG CGTCAGATATGAGTGGTTGGTTACTGCTTGGTTTACCTGGTTATGCTTATGCAGCTGGTTTAGAGTCGTTGTGGCTTGCT GGTGGTTTACTTGTTGGTACATGGCTAAACTGGTTAATTTGTGCAAAACGCTTAAGAACCTATAGCATGACAACGGATGA CTCATTAACTCTTCCTGAATTTTTGTCCCGTCGTTTTAATGACAAATCGAAACTCATTCAAACCATTTCTGCTCTATTCA TTTTACTTTTCTTCCTTTTCTATACGAGTTCTGGTTTGGTTGCTGGTGGTAAGTTATTTGAGACTGTATTTGGTTTAGAT TACAAAGTGGCTGTGGTAATTGGAACATTATGTGTCGTCTCATATACCTTATTCGGTGGATTTTTAGCTGTTGCATGGAC CGATCTTGTTCAAGGCCTTTTAATGTCTGCTGCGTTGATGATTGTACCTATTGCAGCTATGCAAGGTGGCTTCGGACAAT TGAGTTCAGAGCTTGTCGCAATTAACCCTGAGTTAATGACTTTATGGACAGGAATGGATGGCAAACCATTAAGTGCGATT GCAATTATTTCATTAGTGGCATGGGGACTTGGTTATTTTGGACAACCACATATTTTGGCTCGTTTCCAAGCATCTCGTAC AAATAAAGATTTAACGACAGCGCGTCGTATTGCCGTTGCATGGACCGCTCTATCCATGTTTGGCGCCGTACTTGTTGGTC TTGTTGGTTTACTATATGTAACAGGTTCTATGCCTGGTGAGACGATTGATGGTGAAAAAGTATTTATGCTGTTAGTAAAT GCCATTTTCCATCCGGTTGTTGCTGGTATTTTATTAGCTGCTATTTTAGCGGCAATAATGAGTACTGCGGATTCGCAATT ACTTGTATCTTCTTCGGCGTTATCAGAAGATTTATATAAGCAACTGGTTAAGAAAGACGCAACAAGCAAAGAGATCGTTA ATGTGGGTCGTTTCGCTGTCGTTGCTTTGTCTGTTATCGCTCTATTATTAGCAATGAATCCTGATAGTTCTGTTCTTGGT CTCGTATCTTACGCATGGGCAGGTTTTGGTGCTGCATTTGGTCCAGCGATTGTACTTAGCCTTTATTGGAAAGGAATGAA TCGTAATGGTGCTCTTGCTGGCATTATCGTTGGTGGTGTAACAATTGTTGTTTGGAAGCAATTAACTGGCGGTTTATTTG ATGTCTATGAGATTGTTCCTGGAATTATCTTTGCAACTATTGCGATTATTGTCGTTAGTAAGTTAACTGGTAAGCCTGAA GATAAAGTACTAAAACAGCATGAAGAGTTTGAACGTAACCTAGTTGAGTTTGAATAA
Upstream 100 bases:
>100_bases GGATGAATATTACACCGTCATTTTTGCGCCATAACTATAGAGCAAAGCTCAACATAACAAGAGTGACGTTAATTACTGCC AATAACACAAAGGAAATAAA
Downstream 100 bases:
>100_bases GTTCTAGCTTTTTAACAACGATAAACTTAAAGCCTCATAAGATGATTTCTTTTGAGGCTTTTTTTTATATAAATAAAACT GTTACAATCCAGTAACTTTA
Product: proline:sodium symporter
Products: NA
Alternate protein names: Sodium/proline symporter [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MIENNFAITGTFIAYLIMMLAIGVYAYKRTSSSSDYFLGGRTLGPWPAALSAGASDMSGWLLLGLPGYAYAAGLESLWLA GGLLVGTWLNWLICAKRLRTYSMTTDDSLTLPEFLSRRFNDKSKLIQTISALFILLFFLFYTSSGLVAGGKLFETVFGLD YKVAVVIGTLCVVSYTLFGGFLAVAWTDLVQGLLMSAALMIVPIAAMQGGFGQLSSELVAINPELMTLWTGMDGKPLSAI AIISLVAWGLGYFGQPHILARFQASRTNKDLTTARRIAVAWTALSMFGAVLVGLVGLLYVTGSMPGETIDGEKVFMLLVN AIFHPVVAGILLAAILAAIMSTADSQLLVSSSALSEDLYKQLVKKDATSKEIVNVGRFAVVALSVIALLLAMNPDSSVLG LVSYAWAGFGAAFGPAIVLSLYWKGMNRNGALAGIIVGGVTIVVWKQLTGGLFDVYEIVPGIIFATIAIIVVSKLTGKPE DKVLKQHEEFERNLVEFE
Sequences:
>Translated_498_residues MIENNFAITGTFIAYLIMMLAIGVYAYKRTSSSSDYFLGGRTLGPWPAALSAGASDMSGWLLLGLPGYAYAAGLESLWLA GGLLVGTWLNWLICAKRLRTYSMTTDDSLTLPEFLSRRFNDKSKLIQTISALFILLFFLFYTSSGLVAGGKLFETVFGLD YKVAVVIGTLCVVSYTLFGGFLAVAWTDLVQGLLMSAALMIVPIAAMQGGFGQLSSELVAINPELMTLWTGMDGKPLSAI AIISLVAWGLGYFGQPHILARFQASRTNKDLTTARRIAVAWTALSMFGAVLVGLVGLLYVTGSMPGETIDGEKVFMLLVN AIFHPVVAGILLAAILAAIMSTADSQLLVSSSALSEDLYKQLVKKDATSKEIVNVGRFAVVALSVIALLLAMNPDSSVLG LVSYAWAGFGAAFGPAIVLSLYWKGMNRNGALAGIIVGGVTIVVWKQLTGGLFDVYEIVPGIIFATIAIIVVSKLTGKPE DKVLKQHEEFERNLVEFE >Mature_498_residues MIENNFAITGTFIAYLIMMLAIGVYAYKRTSSSSDYFLGGRTLGPWPAALSAGASDMSGWLLLGLPGYAYAAGLESLWLA GGLLVGTWLNWLICAKRLRTYSMTTDDSLTLPEFLSRRFNDKSKLIQTISALFILLFFLFYTSSGLVAGGKLFETVFGLD YKVAVVIGTLCVVSYTLFGGFLAVAWTDLVQGLLMSAALMIVPIAAMQGGFGQLSSELVAINPELMTLWTGMDGKPLSAI AIISLVAWGLGYFGQPHILARFQASRTNKDLTTARRIAVAWTALSMFGAVLVGLVGLLYVTGSMPGETIDGEKVFMLLVN AIFHPVVAGILLAAILAAIMSTADSQLLVSSSALSEDLYKQLVKKDATSKEIVNVGRFAVVALSVIALLLAMNPDSSVLG LVSYAWAGFGAAFGPAIVLSLYWKGMNRNGALAGIIVGGVTIVVWKQLTGGLFDVYEIVPGIIFATIAIIVVSKLTGKPE DKVLKQHEEFERNLVEFE
Specific function: Catalyzes the sodium-dependent uptake of extracellular proline [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=489, Percent_Identity=46.0122699386503, Blast_Score=425, Evalue=1e-119, Organism=Homo sapiens, GI14140236, Length=480, Percent_Identity=24.375, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI4507035, Length=385, Percent_Identity=26.7532467532467, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI110835708, Length=506, Percent_Identity=23.3201581027668, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI109659836, Length=487, Percent_Identity=24.6406570841889, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI11141885, Length=458, Percent_Identity=24.8908296943231, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI4507031, Length=481, Percent_Identity=23.2848232848233, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1787251, Length=488, Percent_Identity=48.3606557377049, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI87082237, Length=492, Percent_Identity=30.4878048780488, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1790503, Length=466, Percent_Identity=29.3991416309013, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI1790113, Length=414, Percent_Identity=22.9468599033816, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI221459584, Length=385, Percent_Identity=24.4155844155844, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24651741, Length=216, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24645928, Length=389, Percent_Identity=26.2210796915167, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI24648033, Length=454, Percent_Identity=23.3480176211454, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356865, Length=454, Percent_Identity=23.3480176211454, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221459588, Length=387, Percent_Identity=24.5478036175711, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651739, Length=202, Percent_Identity=27.2277227722772, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 53320; Mature: 53320
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENNFAITGTFIAYLIMMLAIGVYAYKRTSSSSDYFLGGRTLGPWPAALSAGASDMSGW CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCE LLLGLPGYAYAAGLESLWLAGGLLVGTWLNWLICAKRLRTYSMTTDDSLTLPEFLSRRFN EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC DKSKLIQTISALFILLFFLFYTSSGLVAGGKLFETVFGLDYKVAVVIGTLCVVSYTLFGG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLAVAWTDLVQGLLMSAALMIVPIAAMQGGFGQLSSELVAINPELMTLWTGMDGKPLSAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHEEEEECCCCCCHHHH AIISLVAWGLGYFGQPHILARFQASRTNKDLTTARRIAVAWTALSMFGAVLVGLVGLLYV HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSMPGETIDGEKVFMLLVNAIFHPVVAGILLAAILAAIMSTADSQLLVSSSALSEDLYK HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QLVKKDATSKEIVNVGRFAVVALSVIALLLAMNPDSSVLGLVSYAWAGFGAAFGPAIVLS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHH LYWKGMNRNGALAGIIVGGVTIVVWKQLTGGLFDVYEIVPGIIFATIAIIVVSKLTGKPE HHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DKVLKQHEEFERNLVEFE HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIENNFAITGTFIAYLIMMLAIGVYAYKRTSSSSDYFLGGRTLGPWPAALSAGASDMSGW CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCE LLLGLPGYAYAAGLESLWLAGGLLVGTWLNWLICAKRLRTYSMTTDDSLTLPEFLSRRFN EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC DKSKLIQTISALFILLFFLFYTSSGLVAGGKLFETVFGLDYKVAVVIGTLCVVSYTLFGG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLAVAWTDLVQGLLMSAALMIVPIAAMQGGFGQLSSELVAINPELMTLWTGMDGKPLSAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHEEEEECCCCCCHHHH AIISLVAWGLGYFGQPHILARFQASRTNKDLTTARRIAVAWTALSMFGAVLVGLVGLLYV HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSMPGETIDGEKVFMLLVNAIFHPVVAGILLAAILAAIMSTADSQLLVSSSALSEDLYK HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QLVKKDATSKEIVNVGRFAVVALSVIALLLAMNPDSSVLGLVSYAWAGFGAAFGPAIVLS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHH LYWKGMNRNGALAGIIVGGVTIVVWKQLTGGLFDVYEIVPGIIFATIAIIVVSKLTGKPE HHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DKVLKQHEEFERNLVEFE HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]