| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is fhuA [H]
Identifier: 59713967
GI number: 59713967
Start: 877714
End: 879912
Strand: Reverse
Name: fhuA [H]
Synonym: VF_A0784
Alternate gene names: 59713967
Gene position: 879912-877714 (Counterclockwise)
Preceding gene: 59713968
Following gene: 59713966
Centisome position: 66.14
GC content: 37.24
Gene sequence:
>2199_bases ATGAACGTATCTACAGAATATTCAAAATTTAATGTCACCCTTTTGGCAACAGCAATTGCTTCATCTTTTCTATTTCCTAT TTCAGCAATGGCTAACGATGATAGTGCTTCTGATGATGTTGAAACCATTTCAATATTTGGTCAAGCCTACCGTAATACAG CAACCAAAACATCTTTAGAACCAGAAGAAACCCCACAAGGGATCACTGTACTTGATGGTGAAGTATTAGAACAACGCAGT GTTAAATCTTTGAATGAAGCATTACGTTATGTACCTGGCGTAACCACTGAACAAAAGGGCGGTGCGGTGACGATGTACGA TACGTTTAACATTCGAGGCTTTGATGTAAACCAAAGTTATTATGATGGTTTGGTTCTGCAATATTTAAATGGATGGAATT TACAGCCACAAATTGATCCAATTGCGATTCAGCAAATTGAAGTTTTTAAAGGTCCAACGTCAGTTTTGTACGGTTCTATG CCACCTGGTGGCATGGTAAACATGATTGCTAAGACACCACAAAAAGAAAAAAGTACAGACGTAAAAGTTGCGACGGGTAC TGGTAATTTAGTGGAAGCTTCTATTGATACAACTGGTCAATTTGGTGACAGTGATTTTTCATATCGTTTTATTGCATTAG CACGTCAAAAAGACGGTCAAGTTGATTACACAGAAGAAGAGCGTTATGTAATAGCTCCGTCGGTTGATTGGCAAGTTAGT GATCGTACATTAATTAACTTCAATATGTATTATCAAAATGACCCGTCAATGGGTATGAACTCTGCAATGCCAGCTTCAGG CATGATTTACGATAACCCAAATGGAAGTACAGATCCGTCTACATTTGTAGGTGATAAAAATTGGAGTACGTTTGAACGTG AATTTTTTATGGCTGGCTATAAGATCAACCATGAATTCAATAATAATTGGTCGTTCTTACAAAATTTCCGTTATATGAAT GCGTCGTTGTACCAAGAAAATACCTATCATATTCAAAATGCTTATACACAAGACTTTGATCCATCTACAGGAGTTTTAGA TCGAAGCATATATAGTACCGATGAAAATTCAATTGGTTATACTATTGATAACCAGCTATCAGGTCGAGTGATGGTTGGAA GTGTTGAGCATAATTTATTGTTTGGTATTGATTATCAGAAACTTGATGGCGATTCACGTTATAAAGAGTTTGGTAAAACA AGTCAATTTGGTGATTTCAATATATTCAACCCAAATAACAATATGATAGATAGAGGGCAGCTGTCGAATACTGCTGATTA TAAAGATGAAATCGGTATTGAACAAACAGGTGTTTATTTTCAAGACCAAGTGCGTATAGAGCGACTAGTGTTAATTGCTG GCGGTAGATACGATAAGTTTACATCTGATAGTGACTATAGAGGAAAATATGAAGATAAAGGTGTTTGGTATGATTATAGT AAAAATGATAAAGCTAGCCAAAGCCAGTTCTCTTATCGTGTCGGCGCTTTATATGAGCTAGAAAGTGGTTTCTCACCATT TATTAGTTATGCAACGAGTTTTGAACCTGTTGCTGGTTTGGACGCTCAAGGTAATTCGTATAAACCTGAACTAGGTGAGC AAGTAGAAGTTGGTGTTAAGTATGAATCTTCAGATTATACAAAAGTAGCTTCAGCATCTTTATTTAACATTACTAAAAGT GATGCCATGATGGCTGATCCTACTGATGCATATAATCCTCAATTGCAAATTGGTGAAATCCGTTCTCGCGGTATAGAGCT TCAAGGTCAATGGATGATTAGTGATAGTTGGGATATTGCTGCTAACTACACCTATATAGACATGGAGATTACCGAAGATG ATACATATAACTCTGAAGGTAAAACACCTATCTATGTGCCAACACATGCGGCGAGCTTATGGTCTAACTACTACATTTAT GATGGTATCTTAACTGGAACGCGTATCAGTGGTGGCTTACGCTACGTAGGTGAAATGGAAATGGATGCAGCCAATACGGA CAAAGTACCAGATTATACGCTTGCTGATGTTTCTATTGGTTATGAGCTTGATGGGATCAGTGAATCATTAACAGGGGCAA CGGCTCAATTGAGTGCGACTAACTTGTTTAATACTGAATATTATAGCTGTTACGATTCAGCAAACTGCTGGTACGGTGCA GAACAAACCGTTGAACTGAGCATTAATTATAACTTCTAA
Upstream 100 bases:
>100_bases ACCAAATTGTTAACTTTCATTAGGGATAAATCATTATACTCTTGCGCAAGAGAATCATTCTCATTTGCATTTTGATTTAA GCGTTGTAAGCAGGATTATA
Downstream 100 bases:
>100_bases GTGAACTTGATTTAAAAATAGAGAGAAGTACGTGGCTCTTGCGTACTTCTTTTCTGCATTTTATTTAACAGAGAATAATA TAAGTATTAGCTAAGCTTAT
Product: ferrichrome outer membrane transporter
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MNVSTEYSKFNVTLLATAIASSFLFPISAMANDDSASDDVETISIFGQAYRNTATKTSLEPEETPQGITVLDGEVLEQRS VKSLNEALRYVPGVTTEQKGGAVTMYDTFNIRGFDVNQSYYDGLVLQYLNGWNLQPQIDPIAIQQIEVFKGPTSVLYGSM PPGGMVNMIAKTPQKEKSTDVKVATGTGNLVEASIDTTGQFGDSDFSYRFIALARQKDGQVDYTEEERYVIAPSVDWQVS DRTLINFNMYYQNDPSMGMNSAMPASGMIYDNPNGSTDPSTFVGDKNWSTFEREFFMAGYKINHEFNNNWSFLQNFRYMN ASLYQENTYHIQNAYTQDFDPSTGVLDRSIYSTDENSIGYTIDNQLSGRVMVGSVEHNLLFGIDYQKLDGDSRYKEFGKT SQFGDFNIFNPNNNMIDRGQLSNTADYKDEIGIEQTGVYFQDQVRIERLVLIAGGRYDKFTSDSDYRGKYEDKGVWYDYS KNDKASQSQFSYRVGALYELESGFSPFISYATSFEPVAGLDAQGNSYKPELGEQVEVGVKYESSDYTKVASASLFNITKS DAMMADPTDAYNPQLQIGEIRSRGIELQGQWMISDSWDIAANYTYIDMEITEDDTYNSEGKTPIYVPTHAASLWSNYYIY DGILTGTRISGGLRYVGEMEMDAANTDKVPDYTLADVSIGYELDGISESLTGATAQLSATNLFNTEYYSCYDSANCWYGA EQTVELSINYNF
Sequences:
>Translated_732_residues MNVSTEYSKFNVTLLATAIASSFLFPISAMANDDSASDDVETISIFGQAYRNTATKTSLEPEETPQGITVLDGEVLEQRS VKSLNEALRYVPGVTTEQKGGAVTMYDTFNIRGFDVNQSYYDGLVLQYLNGWNLQPQIDPIAIQQIEVFKGPTSVLYGSM PPGGMVNMIAKTPQKEKSTDVKVATGTGNLVEASIDTTGQFGDSDFSYRFIALARQKDGQVDYTEEERYVIAPSVDWQVS DRTLINFNMYYQNDPSMGMNSAMPASGMIYDNPNGSTDPSTFVGDKNWSTFEREFFMAGYKINHEFNNNWSFLQNFRYMN ASLYQENTYHIQNAYTQDFDPSTGVLDRSIYSTDENSIGYTIDNQLSGRVMVGSVEHNLLFGIDYQKLDGDSRYKEFGKT SQFGDFNIFNPNNNMIDRGQLSNTADYKDEIGIEQTGVYFQDQVRIERLVLIAGGRYDKFTSDSDYRGKYEDKGVWYDYS KNDKASQSQFSYRVGALYELESGFSPFISYATSFEPVAGLDAQGNSYKPELGEQVEVGVKYESSDYTKVASASLFNITKS DAMMADPTDAYNPQLQIGEIRSRGIELQGQWMISDSWDIAANYTYIDMEITEDDTYNSEGKTPIYVPTHAASLWSNYYIY DGILTGTRISGGLRYVGEMEMDAANTDKVPDYTLADVSIGYELDGISESLTGATAQLSATNLFNTEYYSCYDSANCWYGA EQTVELSINYNF >Mature_732_residues MNVSTEYSKFNVTLLATAIASSFLFPISAMANDDSASDDVETISIFGQAYRNTATKTSLEPEETPQGITVLDGEVLEQRS VKSLNEALRYVPGVTTEQKGGAVTMYDTFNIRGFDVNQSYYDGLVLQYLNGWNLQPQIDPIAIQQIEVFKGPTSVLYGSM PPGGMVNMIAKTPQKEKSTDVKVATGTGNLVEASIDTTGQFGDSDFSYRFIALARQKDGQVDYTEEERYVIAPSVDWQVS DRTLINFNMYYQNDPSMGMNSAMPASGMIYDNPNGSTDPSTFVGDKNWSTFEREFFMAGYKINHEFNNNWSFLQNFRYMN ASLYQENTYHIQNAYTQDFDPSTGVLDRSIYSTDENSIGYTIDNQLSGRVMVGSVEHNLLFGIDYQKLDGDSRYKEFGKT SQFGDFNIFNPNNNMIDRGQLSNTADYKDEIGIEQTGVYFQDQVRIERLVLIAGGRYDKFTSDSDYRGKYEDKGVWYDYS KNDKASQSQFSYRVGALYELESGFSPFISYATSFEPVAGLDAQGNSYKPELGEQVEVGVKYESSDYTKVASASLFNITKS DAMMADPTDAYNPQLQIGEIRSRGIELQGQWMISDSWDIAANYTYIDMEITEDDTYNSEGKTPIYVPTHAASLWSNYYIY DGILTGTRISGGLRYVGEMEMDAANTDKVPDYTLADVSIGYELDGISESLTGATAQLSATNLFNTEYYSCYDSANCWYGA EQTVELSINYNF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=727, Percent_Identity=34.3878954607978, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1787024, Length=724, Percent_Identity=23.3425414364641, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1787344, Length=696, Percent_Identity=21.4080459770115, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1787723, Length=682, Percent_Identity=21.7008797653959, Blast_Score=76, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82025; Mature: 82025
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSTEYSKFNVTLLATAIASSFLFPISAMANDDSASDDVETISIFGQAYRNTATKTSLE CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC PEETPQGITVLDGEVLEQRSVKSLNEALRYVPGVTTEQKGGAVTMYDTFNIRGFDVNQSY CCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCCHH YDGLVLQYLNGWNLQPQIDPIAIQQIEVFKGPTSVLYGSMPPGGMVNMIAKTPQKEKSTD HCCCCEEHHCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCCCCC VKVATGTGNLVEASIDTTGQFGDSDFSYRFIALARQKDGQVDYTEEERYVIAPSVDWQVS EEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEC DRTLINFNMYYQNDPSMGMNSAMPASGMIYDNPNGSTDPSTFVGDKNWSTFEREFFMAGY CEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHEEEEECE KINHEFNNNWSFLQNFRYMNASLYQENTYHIQNAYTQDFDPSTGVLDRSIYSTDENSIGY EEEEEECCCHHHHHHHHHHCCEEECCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCE TIDNQLSGRVMVGSVEHNLLFGIDYQKLDGDSRYKEFGKTSQFGDFNIFNPNNNMIDRGQ EECCCCCCEEEEEEECCCEEEEECHHHCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCC LSNTADYKDEIGIEQTGVYFQDQVRIERLVLIAGGRYDKFTSDSDYRGKYEDKGVWYDYS CCCCCCCHHHCCCCCCCCEEEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC KNDKASQSQFSYRVGALYELESGFSPFISYATSFEPVAGLDAQGNSYKPELGEQVEVGVK CCCCCCHHHHEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEE YESSDYTKVASASLFNITKSDAMMADPTDAYNPQLQIGEIRSRGIELQGQWMISDSWDIA ECCCCCCCHHCCEEEEEECCCCEEECCCCCCCCCEEEECHHHCCEEEEEEEEEECCCCEE ANYTYIDMEITEDDTYNSEGKTPIYVPTHAASLWSNYYIYDGILTGTRISGGLRYVGEME EEEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHCCEEEEEEEEECCEECCCEEEEEEEE MDAANTDKVPDYTLADVSIGYELDGISESLTGATAQLSATNLFNTEYYSCYDSANCWYGA ECCCCCCCCCCEEEEEEEECEEECCCCHHHCCCEEEEEECEECCCCEEEEECCCCCEECC EQTVELSINYNF CEEEEEEEEECC >Mature Secondary Structure MNVSTEYSKFNVTLLATAIASSFLFPISAMANDDSASDDVETISIFGQAYRNTATKTSLE CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC PEETPQGITVLDGEVLEQRSVKSLNEALRYVPGVTTEQKGGAVTMYDTFNIRGFDVNQSY CCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCCHH YDGLVLQYLNGWNLQPQIDPIAIQQIEVFKGPTSVLYGSMPPGGMVNMIAKTPQKEKSTD HCCCCEEHHCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCCCCC VKVATGTGNLVEASIDTTGQFGDSDFSYRFIALARQKDGQVDYTEEERYVIAPSVDWQVS EEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEC DRTLINFNMYYQNDPSMGMNSAMPASGMIYDNPNGSTDPSTFVGDKNWSTFEREFFMAGY CEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHEEEEECE KINHEFNNNWSFLQNFRYMNASLYQENTYHIQNAYTQDFDPSTGVLDRSIYSTDENSIGY EEEEEECCCHHHHHHHHHHCCEEECCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCE TIDNQLSGRVMVGSVEHNLLFGIDYQKLDGDSRYKEFGKTSQFGDFNIFNPNNNMIDRGQ EECCCCCCEEEEEEECCCEEEEECHHHCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCC LSNTADYKDEIGIEQTGVYFQDQVRIERLVLIAGGRYDKFTSDSDYRGKYEDKGVWYDYS CCCCCCCHHHCCCCCCCCEEEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC KNDKASQSQFSYRVGALYELESGFSPFISYATSFEPVAGLDAQGNSYKPELGEQVEVGVK CCCCCCHHHHEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEE YESSDYTKVASASLFNITKSDAMMADPTDAYNPQLQIGEIRSRGIELQGQWMISDSWDIA ECCCCCCCHHCCEEEEEECCCCEEECCCCCCCCCEEEECHHHCCEEEEEEEEEECCCCEE ANYTYIDMEITEDDTYNSEGKTPIYVPTHAASLWSNYYIYDGILTGTRISGGLRYVGEME EEEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHCCEEEEEEEEECCEECCCEEEEEEEE MDAANTDKVPDYTLADVSIGYELDGISESLTGATAQLSATNLFNTEYYSCYDSANCWYGA ECCCCCCCCCCEEEEEEEECEEECCCCHHHCCCEEEEEECEECCCCEEEEECCCCCEECC EQTVELSINYNF CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]