| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713944
Identifier: 59713944
GI number: 59713944
Start: 857749
End: 858501
Strand: Reverse
Name: 59713944
Synonym: VF_A0761
Alternate gene names: NA
Gene position: 858501-857749 (Counterclockwise)
Preceding gene: 59713945
Following gene: 59713943
Centisome position: 64.53
GC content: 36.65
Gene sequence:
>753_bases ATGAGTGTGCATCAAGCAGATTTGATCCATTCCTGTATTTATCACGGTGATGTTAGACATCGCCGTTTTCAAACTCGTGA GCACAGTTTTAGCTATGAAATGTTTTTTATTGCTTTAGATCTTGATGAGTTAGAGCAAACAGAGTCCGTTGGGTGGTTTA GGAAAAATCGCTTTTCACCGTTGTCATTTCGCCGTTCAGATTATCTTGGTAAGGCAGAGCAACCGTTAAAACAAGCGGTG TGGGATAAAGTGGAAGAGCTTGGTGGTTTATCACTTCAAACACGAGTTTTATTTGTTGGCCAAGTACGCTGTTTTGGCGT CTATTTTAGTCCAATTAATTTGTATTATTGTTACGACAAAAATGACCAATTGACTTATTTGTTAGCGGAAGTGAGTAATA CGCCATGGAATCAAACCCATTATTATTTAATCGAAATGGATTCCGATAAAATCATTGATAAAGCTTTTCATGTCTCGCCA TTTTTAAACTTAGAGATGAAATATCATTGGTTCGTTAAAGCCCCCAATAAACACCTCTCATTGCATTTAGAAAATCGTGG TCTGGATAAAAACCAAGAAAAAATCTTTGATGCGACCATTTCGATGACAAGAAAGCCGTTTAATTCAAAAAATATTAAAC AACAAGTGATCTCAATTCCGATGATGACCGTAAAGATAGTATATGGAATTTACTGGCAGGCACTGAAATTATGCTTAAAA CGAATACCGTTTGTGCCTCATCCAGAAAAGTAG
Upstream 100 bases:
>100_bases ATAATCATACACACTTTGCTGGTGCTTATTGGTACAACGGATTCCATGAAGATGGAGTAAGAAGTGCGTTAGATGTGTGC CAACGCTTTGGGATAAGTTT
Downstream 100 bases:
>100_bases GGGGAACCATGTCTAATAATCAAATCAATTCTGTTTCGATAGAAAATCAACAAGTAGAACCTGTAAGTTGGATTGATGGT CTGGCAAGAAAGGTGTTAAT
Product: plasmid partition ParA protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSVHQADLIHSCIYHGDVRHRRFQTREHSFSYEMFFIALDLDELEQTESVGWFRKNRFSPLSFRRSDYLGKAEQPLKQAV WDKVEELGGLSLQTRVLFVGQVRCFGVYFSPINLYYCYDKNDQLTYLLAEVSNTPWNQTHYYLIEMDSDKIIDKAFHVSP FLNLEMKYHWFVKAPNKHLSLHLENRGLDKNQEKIFDATISMTRKPFNSKNIKQQVISIPMMTVKIVYGIYWQALKLCLK RIPFVPHPEK
Sequences:
>Translated_250_residues MSVHQADLIHSCIYHGDVRHRRFQTREHSFSYEMFFIALDLDELEQTESVGWFRKNRFSPLSFRRSDYLGKAEQPLKQAV WDKVEELGGLSLQTRVLFVGQVRCFGVYFSPINLYYCYDKNDQLTYLLAEVSNTPWNQTHYYLIEMDSDKIIDKAFHVSP FLNLEMKYHWFVKAPNKHLSLHLENRGLDKNQEKIFDATISMTRKPFNSKNIKQQVISIPMMTVKIVYGIYWQALKLCLK RIPFVPHPEK >Mature_249_residues SVHQADLIHSCIYHGDVRHRRFQTREHSFSYEMFFIALDLDELEQTESVGWFRKNRFSPLSFRRSDYLGKAEQPLKQAVW DKVEELGGLSLQTRVLFVGQVRCFGVYFSPINLYYCYDKNDQLTYLLAEVSNTPWNQTHYYLIEMDSDKIIDKAFHVSPF LNLEMKYHWFVKAPNKHLSLHLENRGLDKNQEKIFDATISMTRKPFNSKNIKQQVISIPMMTVKIVYGIYWQALKLCLKR IPFVPHPEK
Specific function: Unknown
COG id: COG3496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29680; Mature: 29548
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVHQADLIHSCIYHGDVRHRRFQTREHSFSYEMFFIALDLDELEQTESVGWFRKNRFSP CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHCCHHHHCCCCC LSFRRSDYLGKAEQPLKQAVWDKVEELGGLSLQTRVLFVGQVRCFGVYFSPINLYYCYDK CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEECCEEEEEEECC NDQLTYLLAEVSNTPWNQTHYYLIEMDSDKIIDKAFHVSPFLNLEMKYHWFVKAPNKHLS CCCEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHCCCCEEEEEEEEEEEEECCCCEEE LHLENRGLDKNQEKIFDATISMTRKPFNSKNIKQQVISIPMMTVKIVYGIYWQALKLCLK EEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH RIPFVPHPEK HCCCCCCCCC >Mature Secondary Structure SVHQADLIHSCIYHGDVRHRRFQTREHSFSYEMFFIALDLDELEQTESVGWFRKNRFSP CCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHCCHHHHCCCCC LSFRRSDYLGKAEQPLKQAVWDKVEELGGLSLQTRVLFVGQVRCFGVYFSPINLYYCYDK CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEECCEEEEEEECC NDQLTYLLAEVSNTPWNQTHYYLIEMDSDKIIDKAFHVSPFLNLEMKYHWFVKAPNKHLS CCCEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHCCCCEEEEEEEEEEEEECCCCEEE LHLENRGLDKNQEKIFDATISMTRKPFNSKNIKQQVISIPMMTVKIVYGIYWQALKLCLK EEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH RIPFVPHPEK HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA