| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713942
Identifier: 59713942
GI number: 59713942
Start: 855829
End: 856398
Strand: Reverse
Name: 59713942
Synonym: VF_A0759
Alternate gene names: NA
Gene position: 856398-855829 (Counterclockwise)
Preceding gene: 59713943
Following gene: 59713941
Centisome position: 64.37
GC content: 38.25
Gene sequence:
>570_bases ATGCAACGTTATTTCCCTCTGATTAATGCCGTGTGGTTTCAGCTTGCCTGGCTTGCTGCCATTATTTACAAGCAGCAAGC CATTCCTTTTTTATTACTTTCTGTATTGATCCATTTGTGGGTATCACCAAGTCGAAAACAAGATGCCATGATGATCACGG TTATTGGTATTATTGGTGTTATTAGTGATTCCTTCTTATCGTTAATCGATATCTTTTCTTTTGCCAATAATGCCATTATT CCTATTTGGTTAATTATGATTTGGGCTCACTTCTCTATTGCTTTAAACCACAGCTTGAAATGGTTAAATCGTTTTCATAT CGTCGCTATCTCTTTATTTGGTGCCATTGCGGGGCCTTTAAACTATCTCGCAGGACAACGACTTGGCGGCGTTGAGTTTG TCTATTCATTAAATATCACTTTATTTGCTGTTGCGGTGATCTGGGCTGTCAATTTACCCGTATTTATTATTATTCAGAAA CGAATAAATCAAAGAATACAGGAAAGGGGGAGTTCACATGGCGAAGCAAATCAACATGCTCATTCTAGCGGGGTTGTTAA TAACAAGTAG
Upstream 100 bases:
>100_bases CATGGTGTTGTTTAAGTCCATTGATATAGATTGTTAGTAAAGTTTTTTGCAAGTGATTTTTATAGATTAATGTTTGCAAA TTATTGTTTAGGAGGCTGCC
Downstream 100 bases:
>100_bases TGTTCAATCCGCGCCATTATCTGGGTTAGAAAGTAGCGGTAAATCGGAATTAACTTGGTATCTCATTTCAGTTTATCAGG CACAACTTTTTACTTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MQRYFPLINAVWFQLAWLAAIIYKQQAIPFLLLSVLIHLWVSPSRKQDAMMITVIGIIGVISDSFLSLIDIFSFANNAII PIWLIMIWAHFSIALNHSLKWLNRFHIVAISLFGAIAGPLNYLAGQRLGGVEFVYSLNITLFAVAVIWAVNLPVFIIIQK RINQRIQERGSSHGEANQHAHSSGVVNNK
Sequences:
>Translated_189_residues MQRYFPLINAVWFQLAWLAAIIYKQQAIPFLLLSVLIHLWVSPSRKQDAMMITVIGIIGVISDSFLSLIDIFSFANNAII PIWLIMIWAHFSIALNHSLKWLNRFHIVAISLFGAIAGPLNYLAGQRLGGVEFVYSLNITLFAVAVIWAVNLPVFIIIQK RINQRIQERGSSHGEANQHAHSSGVVNNK >Mature_189_residues MQRYFPLINAVWFQLAWLAAIIYKQQAIPFLLLSVLIHLWVSPSRKQDAMMITVIGIIGVISDSFLSLIDIFSFANNAII PIWLIMIWAHFSIALNHSLKWLNRFHIVAISLFGAIAGPLNYLAGQRLGGVEFVYSLNITLFAVAVIWAVNLPVFIIIQK RINQRIQERGSSHGEANQHAHSSGVVNNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21288; Mature: 21288
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRYFPLINAVWFQLAWLAAIIYKQQAIPFLLLSVLIHLWVSPSRKQDAMMITVIGIIGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ISDSFLSLIDIFSFANNAIIPIWLIMIWAHFSIALNHSLKWLNRFHIVAISLFGAIAGPL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NYLAGQRLGGVEFVYSLNITLFAVAVIWAVNLPVFIIIQKRINQRIQERGSSHGEANQHA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH HSSGVVNNK HCCCCCCCC >Mature Secondary Structure MQRYFPLINAVWFQLAWLAAIIYKQQAIPFLLLSVLIHLWVSPSRKQDAMMITVIGIIGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ISDSFLSLIDIFSFANNAIIPIWLIMIWAHFSIALNHSLKWLNRFHIVAISLFGAIAGPL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NYLAGQRLGGVEFVYSLNITLFAVAVIWAVNLPVFIIIQKRINQRIQERGSSHGEANQHA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH HSSGVVNNK HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA