| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is fpvA [H]
Identifier: 59713855
GI number: 59713855
Start: 741538
End: 743676
Strand: Reverse
Name: fpvA [H]
Synonym: VF_A0672
Alternate gene names: 59713855
Gene position: 743676-741538 (Counterclockwise)
Preceding gene: 59713856
Following gene: 59713854
Centisome position: 55.9
GC content: 40.58
Gene sequence:
>2139_bases ATGACCAAAACTAAATTAACCACTCTTGCTATTGCTATTGCTGCGTCATTATCGCCCGTTAAATCTTTTGCTGATACAGA TAATGTTTCTACGTTTGAAGCCATTGAGGTTGTAGGTACACGCCCAGATTATAAAACTGAATCCGTAAGCACTGCGACTA AAATGGATATTGCACCGCTTGAGAACCCACGTTCTGTAAATAGCATTGATAGAAAGTTACTTGATGATTTACAGGCGACC TCACTTGATAAAGCGCTTAAGAACGATGCCTCAACCGTTTCTACTTATGAAAGCGACGGACACGAAAACTTTTATATTCG CGGTTTCCAGTTAACTACTAACGATGGTTATTTGCGTAATGGTGAGCAGAAATATTCCCTTATTCAAGAACCTGTAGAAA TGTATGAGCGAATTGAAGTGCTAAAAGGCCCGTCAGGTCTTCTTTATGGTAAAGGTTCACCAGCAGGATTGGTGAACATG GTAACAAAAGAGCCTGAATACCAGCGCCGCACTATGATTTCTCAAGATGTTGGTAGTAATAACTTTTCGCGTTCAGTGGT GGATACTACAGGTTCCGCAACGGACGATTTACGTTATCGTGTAATTGCCTCAAAACAATCAAAAGATAACTTTAGACACT ACGTTAATGGCGTTCATCCAACTACACGCCGTGATTTATTGGCAATCATGCTTGATTATGATCTGACAGACGACACGATG TTATCGCTATCTTATGATTACAAGACGCAAAAAGGGCACCAAGATAGTGGCGCTTACTTTGATGAAGACGGCAACATTAT TGGCGACCGTGATTTAATTCTTAATACACCTTGGTCAACCAATGAGAAAGAAGAGGAAAGCATTGGCGTTAAGCTAACGC ACCACTTTGATAATGACTGGAAGTTAACGGCAAGCTATCACAAGTTGAATATGGTTAATACTGCTAAGACTTCAAGCATT AGACCAATGAAAGATAGTGCTCAAACAGGTAAGTACGAGTTTAATACTGGTAAGCGTGATAATAGTTATGATGTTCATAC AGGTACTATGGATCTAACGGGTGACTTTAATACAGGTTCAATTGAGCATAAGTTGCTTGTTGGCACCAACTTTGTAGATC ATGAGTATTCACGTAACAGTTTATACGGTGGTGTTAAGCAGGCCGCAAGTACTAACCCTGCGACACCAATTTACGGATTT GATCCAAGTAAATCAGGTAAGCCAAGTTCTAACGTTTATTCTAATTTCCAAACAGGCTTATATGTACAAGATTTGATAAC GTTTAATGACTACTGGCAAGTTCTAGCTGGTGCTCGTGCCGATTACTACATCAAATATCGTTCTAAGAATGATAAGAGAG ACGGCAAAGGCGAAGATACTGAATATTTCAACGTCTTGCCAAGTGCTGCGGTTATGTTCCATCCATCCGCTGACTCAACA ATATACGCTAGTTACTCACAATCGTTTGTTCCTCAAACGCCTATTAGTAGTTCAAGCGATGCGAACGATGGAATGGAACG TGAACCAGAGCTAGGCCATTTATATGAGATTGGTTATAAACAGGAGTTCATGGATAACAGCGCTATATTTGAAACGTCTT TATTCCAGATAGTGAAAGAAAACATTTCAGTTACTGATAGAAAGTATCGTGATCCAAATAATCCAGCTATCACCAAGAAA ACAGAGCAGGGCGGCAAACAGATTAATACAGGTATTGATACAACAATCACGGGTCGTGTGACAGAGTTATTAACTGTTAA GGCTGGTGCGCAGTACTTAATTGCTGAATATGAGGGCCAGCCGAAGTATGACGGTAAGAAAATAGCAGACGTTCCACAAT GGACGGCTAACGCATGGGCTAACTATGAGTTAACAGACCATATCGATCTGAATGCTGGTGTTTATTACATTGGTTCGCGT TACGGTAATAGCGCCAATGATGAGCCAAAGAAATCGGCTTACACCTTGGCGGATGTAGGTGCTATTTATCGTATGCCTAT GGATTCAGGTGATGAGCTTTCATTCAGAGCTAAGATTAACAACGTATTTGATAAAGAGTATGAAACAAGTGGTGATTACT CTGGTATGAGTATCGGCGAGGGCCGTAACTATATGCTATCAGCACAGTACGAGTTCTAA
Upstream 100 bases:
>100_bases AGTTAATGTCAATTTACAAGCGCCTACGCGCTTTTGAAATGCAAATAGAAATTTTCTCTTTAGAAGAAAACTCGAATTTA ACCTTAAAAGGCAAAAAAAT
Downstream 100 bases:
>100_bases GAAAAAGCCCACTACGCCCTGAACAACTGGCCCAACCCAAAAAGGGCGTTGTGGCACCAATAACAGACCCCGTATTTACG CAGATTTATTGTATGTATTG
Product: outer membrane heme receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 712; Mature: 711
Protein sequence:
>712_residues MTKTKLTTLAIAIAASLSPVKSFADTDNVSTFEAIEVVGTRPDYKTESVSTATKMDIAPLENPRSVNSIDRKLLDDLQAT SLDKALKNDASTVSTYESDGHENFYIRGFQLTTNDGYLRNGEQKYSLIQEPVEMYERIEVLKGPSGLLYGKGSPAGLVNM VTKEPEYQRRTMISQDVGSNNFSRSVVDTTGSATDDLRYRVIASKQSKDNFRHYVNGVHPTTRRDLLAIMLDYDLTDDTM LSLSYDYKTQKGHQDSGAYFDEDGNIIGDRDLILNTPWSTNEKEEESIGVKLTHHFDNDWKLTASYHKLNMVNTAKTSSI RPMKDSAQTGKYEFNTGKRDNSYDVHTGTMDLTGDFNTGSIEHKLLVGTNFVDHEYSRNSLYGGVKQAASTNPATPIYGF DPSKSGKPSSNVYSNFQTGLYVQDLITFNDYWQVLAGARADYYIKYRSKNDKRDGKGEDTEYFNVLPSAAVMFHPSADST IYASYSQSFVPQTPISSSSDANDGMEREPELGHLYEIGYKQEFMDNSAIFETSLFQIVKENISVTDRKYRDPNNPAITKK TEQGGKQINTGIDTTITGRVTELLTVKAGAQYLIAEYEGQPKYDGKKIADVPQWTANAWANYELTDHIDLNAGVYYIGSR YGNSANDEPKKSAYTLADVGAIYRMPMDSGDELSFRAKINNVFDKEYETSGDYSGMSIGEGRNYMLSAQYEF
Sequences:
>Translated_712_residues MTKTKLTTLAIAIAASLSPVKSFADTDNVSTFEAIEVVGTRPDYKTESVSTATKMDIAPLENPRSVNSIDRKLLDDLQAT SLDKALKNDASTVSTYESDGHENFYIRGFQLTTNDGYLRNGEQKYSLIQEPVEMYERIEVLKGPSGLLYGKGSPAGLVNM VTKEPEYQRRTMISQDVGSNNFSRSVVDTTGSATDDLRYRVIASKQSKDNFRHYVNGVHPTTRRDLLAIMLDYDLTDDTM LSLSYDYKTQKGHQDSGAYFDEDGNIIGDRDLILNTPWSTNEKEEESIGVKLTHHFDNDWKLTASYHKLNMVNTAKTSSI RPMKDSAQTGKYEFNTGKRDNSYDVHTGTMDLTGDFNTGSIEHKLLVGTNFVDHEYSRNSLYGGVKQAASTNPATPIYGF DPSKSGKPSSNVYSNFQTGLYVQDLITFNDYWQVLAGARADYYIKYRSKNDKRDGKGEDTEYFNVLPSAAVMFHPSADST IYASYSQSFVPQTPISSSSDANDGMEREPELGHLYEIGYKQEFMDNSAIFETSLFQIVKENISVTDRKYRDPNNPAITKK TEQGGKQINTGIDTTITGRVTELLTVKAGAQYLIAEYEGQPKYDGKKIADVPQWTANAWANYELTDHIDLNAGVYYIGSR YGNSANDEPKKSAYTLADVGAIYRMPMDSGDELSFRAKINNVFDKEYETSGDYSGMSIGEGRNYMLSAQYEF >Mature_711_residues TKTKLTTLAIAIAASLSPVKSFADTDNVSTFEAIEVVGTRPDYKTESVSTATKMDIAPLENPRSVNSIDRKLLDDLQATS LDKALKNDASTVSTYESDGHENFYIRGFQLTTNDGYLRNGEQKYSLIQEPVEMYERIEVLKGPSGLLYGKGSPAGLVNMV TKEPEYQRRTMISQDVGSNNFSRSVVDTTGSATDDLRYRVIASKQSKDNFRHYVNGVHPTTRRDLLAIMLDYDLTDDTML SLSYDYKTQKGHQDSGAYFDEDGNIIGDRDLILNTPWSTNEKEEESIGVKLTHHFDNDWKLTASYHKLNMVNTAKTSSIR PMKDSAQTGKYEFNTGKRDNSYDVHTGTMDLTGDFNTGSIEHKLLVGTNFVDHEYSRNSLYGGVKQAASTNPATPIYGFD PSKSGKPSSNVYSNFQTGLYVQDLITFNDYWQVLAGARADYYIKYRSKNDKRDGKGEDTEYFNVLPSAAVMFHPSADSTI YASYSQSFVPQTPISSSSDANDGMEREPELGHLYEIGYKQEFMDNSAIFETSLFQIVKENISVTDRKYRDPNNPAITKKT EQGGKQINTGIDTTITGRVTELLTVKAGAQYLIAEYEGQPKYDGKKIADVPQWTANAWANYELTDHIDLNAGVYYIGSRY GNSANDEPKKSAYTLADVGAIYRMPMDSGDELSFRAKINNVFDKEYETSGDYSGMSIGEGRNYMLSAQYEF
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=754, Percent_Identity=23.8726790450928, Blast_Score=153, Evalue=4e-38, Organism=Escherichia coli, GI1787024, Length=792, Percent_Identity=22.2222222222222, Blast_Score=107, Evalue=4e-24, Organism=Escherichia coli, GI1786344, Length=380, Percent_Identity=28.9473684210526, Blast_Score=95, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79598; Mature: 79466
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTKLTTLAIAIAASLSPVKSFADTDNVSTFEAIEVVGTRPDYKTESVSTATKMDIAPL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHEEECCCC ENPRSVNSIDRKLLDDLQATSLDKALKNDASTVSTYESDGHENFYIRGFQLTTNDGYLRN CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCEEC GEQKYSLIQEPVEMYERIEVLKGPSGLLYGKGSPAGLVNMVTKEPEYQRRTMISQDVGSN CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHCCCCC NFSRSVVDTTGSATDDLRYRVIASKQSKDNFRHYVNGVHPTTRRDLLAIMLDYDLTDDTM CCCCHHEECCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHCEEEEEEECCCCCCEE LSLSYDYKTQKGHQDSGAYFDEDGNIIGDRDLILNTPWSTNEKEEESIGVKLTHHFDNDW EEEEECCCCCCCCCCCCCEECCCCCEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCE KLTASYHKLNMVNTAKTSSIRPMKDSAQTGKYEFNTGKRDNSYDVHTGTMDLTGDFNTGS EEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECEEEEECCCCCCC IEHKLLVGTNFVDHEYSRNSLYGGVKQAASTNPATPIYGFDPSKSGKPSSNVYSNFQTGL EEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCE YVQDLITFNDYWQVLAGARADYYIKYRSKNDKRDGKGEDTEYFNVLPSAAVMFHPSADST EEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCE IYASYSQSFVPQTPISSSSDANDGMEREPELGHLYEIGYKQEFMDNSAIFETSLFQIVKE EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHH NISVTDRKYRDPNNPAITKKTEQGGKQINTGIDTTITGRVTELLTVKAGAQYLIAEYEGQ CCCCCHHHCCCCCCCCEECCHHHCCCEECCCCCCEECCCCEEEEEEECCCEEEEEEECCC PKYDGKKIADVPQWTANAWANYELTDHIDLNAGVYYIGSRYGNSANDEPKKSAYTLADVG CCCCCCCCCCCCCCCCCCEECCEEECEEECCCCEEEEECCCCCCCCCCCHHHHEEHHHCC AIYRMPMDSGDELSFRAKINNVFDKEYETSGDYSGMSIGEGRNYMLSAQYEF CEEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEECC >Mature Secondary Structure TKTKLTTLAIAIAASLSPVKSFADTDNVSTFEAIEVVGTRPDYKTESVSTATKMDIAPL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHEEECCCC ENPRSVNSIDRKLLDDLQATSLDKALKNDASTVSTYESDGHENFYIRGFQLTTNDGYLRN CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCEEC GEQKYSLIQEPVEMYERIEVLKGPSGLLYGKGSPAGLVNMVTKEPEYQRRTMISQDVGSN CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHCCCCC NFSRSVVDTTGSATDDLRYRVIASKQSKDNFRHYVNGVHPTTRRDLLAIMLDYDLTDDTM CCCCHHEECCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHCEEEEEEECCCCCCEE LSLSYDYKTQKGHQDSGAYFDEDGNIIGDRDLILNTPWSTNEKEEESIGVKLTHHFDNDW EEEEECCCCCCCCCCCCCEECCCCCEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCE KLTASYHKLNMVNTAKTSSIRPMKDSAQTGKYEFNTGKRDNSYDVHTGTMDLTGDFNTGS EEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECEEEEECCCCCCC IEHKLLVGTNFVDHEYSRNSLYGGVKQAASTNPATPIYGFDPSKSGKPSSNVYSNFQTGL EEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCE YVQDLITFNDYWQVLAGARADYYIKYRSKNDKRDGKGEDTEYFNVLPSAAVMFHPSADST EEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCE IYASYSQSFVPQTPISSSSDANDGMEREPELGHLYEIGYKQEFMDNSAIFETSLFQIVKE EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHH NISVTDRKYRDPNNPAITKKTEQGGKQINTGIDTTITGRVTELLTVKAGAQYLIAEYEGQ CCCCCHHHCCCCCCCCEECCHHHCCCEECCCCCCEECCCCEEEEEEECCCEEEEEEECCC PKYDGKKIADVPQWTANAWANYELTDHIDLNAGVYYIGSRYGNSANDEPKKSAYTLADVG CCCCCCCCCCCCCCCCCCEECCEEECEEECCCCEEEEECCCCCCCCCCCHHHHEEHHHCC AIYRMPMDSGDELSFRAKINNVFDKEYETSGDYSGMSIGEGRNYMLSAQYEF CEEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]