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The map label for this gene is ykfG [C]

Identifier: 59713705

GI number: 59713705

Start: 596870

End: 597343

Strand: Reverse

Name: ykfG [C]

Synonym: VF_A0522

Alternate gene names: 59713705

Gene position: 597343-596870 (Counterclockwise)

Preceding gene: 59713731

Following gene: 59713704

Centisome position: 44.9

GC content: 41.77

Gene sequence:

>474_bases
ATGTCGAATAAATCCTCTCATTATCTAAAACAACAGCGTTACCAAGAAAATGAAATTCTAGAGCACGCTGCCGAGATCCT
TGCTAACCGCTATGTTCGTGGAGACGCATTCTCTAACCCTACTGCGACACAAAATTATTTACGTTACAAACTGGGCCATT
ATGAGCGTGAGGTATTCGCTGTTTTATTGCTTGATAACCAACATCGATTAATTGAATTTAAAGAGTTATTTCAAGGAACC
GTAGATGCGGCAAGTGTCTACCCAAGAGAGGTTGTAAAAGCAGTTTTAGAAGTGAATGCGGCGGCGGTAATATTTGCGCA
CAATCATCCATCAGGAGAGTCAACGCCATCACAGGCTGATAAACGAATTACGACACGTTTAAAAGAGGCGTTAGCACTCA
TTGATGTTCAAGTATTAGATCATATTGTCGTAGGGGAAACCTGCGTCTCTTTTGCAGAGCGAGGGCTAATCTAA

Upstream 100 bases:

>100_bases
GTTAAAAAAAGTGACGTCCCAAAAATCTCTCTTAATCTATTTATTTTCAGGTATATATCATCTATGTGAAGACAAATACT
GATTCACATTAGGAGCTAAT

Downstream 100 bases:

>100_bases
TGAAAAGAGAATTACTTGTTCACGGTAAAGACCTAGCATTACCAAAAAGTCTGCATCGTCACCTTGAAGTAGTACTTGAT
AGCTTTTCCCTTCGTGCTGA

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSNKSSHYLKQQRYQENEILEHAAEILANRYVRGDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQGT
VDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDHIVVGETCVSFAERGLI

Sequences:

>Translated_157_residues
MSNKSSHYLKQQRYQENEILEHAAEILANRYVRGDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQGT
VDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDHIVVGETCVSFAERGLI
>Mature_156_residues
SNKSSHYLKQQRYQENEILEHAAEILANRYVRGDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQGTV
DAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDHIVVGETCVSFAERGLI

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=125, Percent_Identity=54.4, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1788997, Length=137, Percent_Identity=50.3649635036496, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI87082300, Length=120, Percent_Identity=48.3333333333333, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI1788312, Length=125, Percent_Identity=52, Blast_Score=126, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17766; Mature: 17635

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKSSHYLKQQRYQENEILEHAAEILANRYVRGDAFSNPTATQNYLRYKLGHYEREVFA
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHE
VLLLDNQHRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQAD
EEEECCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH
KRITTRLKEALALIDVQVLDHIVVGETCVSFAERGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNKSSHYLKQQRYQENEILEHAAEILANRYVRGDAFSNPTATQNYLRYKLGHYEREVFA
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHE
VLLLDNQHRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQAD
EEEECCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH
KRITTRLKEALALIDVQVLDHIVVGETCVSFAERGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]