| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713704
Identifier: 59713704
GI number: 59713704
Start: 596427
End: 596870
Strand: Reverse
Name: 59713704
Synonym: VF_A0521
Alternate gene names: NA
Gene position: 596870-596427 (Counterclockwise)
Preceding gene: 59713705
Following gene: 59713703
Centisome position: 44.87
GC content: 41.44
Gene sequence:
>444_bases ATGAAAAGAGAATTACTTGTTCACGGTAAAGACCTAGCATTACCAAAAAGTCTGCATCGTCACCTTGAAGTAGTACTTGA TAGCTTTTCCCTTCGTGCTGACATCAATCGACTTTCAGTGAACTTTCGAGACATTAGCTATTATCATCGACGTGAGGGAT TGCACCCTGTAGAAATGCGTTTTGAGCGAGACGAAGATAATCGCCATATTTGGAAATTGGTGTTTATTGCCAGCTTTTCT TATCCCGATGAACACAGTCCAAACGTTGCACCTGAGCTGTATTTTAACTTTAAGCGTGGTTGGTTCTATCAACCTGACAT TCAAGGCTGTGAGCTTGCAAGGCCGCAAGTCATCGACTTATTTACTTCATGGGCTCTCGCCTTTTGTCGTCAACTCAGAA ATCAACATTTCGATGATATTTCAGCTAACGAAATACGCACTTAA
Upstream 100 bases:
>100_bases CACGTTTAAAAGAGGCGTTAGCACTCATTGATGTTCAAGTATTAGATCATATTGTCGTAGGGGAAACCTGCGTCTCTTTT GCAGAGCGAGGGCTAATCTA
Downstream 100 bases:
>100_bases TCCCATCCAACCTTAATTCGTTTTACCAAACTATTATCTTATTTCAATCATAGGAGGACACACCGTGTCTGAATTACAAA CCATCATTACTACCGCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKRELLVHGKDLALPKSLHRHLEVVLDSFSLRADINRLSVNFRDISYYHRREGLHPVEMRFERDEDNRHIWKLVFIASFS YPDEHSPNVAPELYFNFKRGWFYQPDIQGCELARPQVIDLFTSWALAFCRQLRNQHFDDISANEIRT
Sequences:
>Translated_147_residues MKRELLVHGKDLALPKSLHRHLEVVLDSFSLRADINRLSVNFRDISYYHRREGLHPVEMRFERDEDNRHIWKLVFIASFS YPDEHSPNVAPELYFNFKRGWFYQPDIQGCELARPQVIDLFTSWALAFCRQLRNQHFDDISANEIRT >Mature_147_residues MKRELLVHGKDLALPKSLHRHLEVVLDSFSLRADINRLSVNFRDISYYHRREGLHPVEMRFERDEDNRHIWKLVFIASFS YPDEHSPNVAPELYFNFKRGWFYQPDIQGCELARPQVIDLFTSWALAFCRQLRNQHFDDISANEIRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17616; Mature: 17616
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRELLVHGKDLALPKSLHRHLEVVLDSFSLRADINRLSVNFRDISYYHRREGLHPVEMR CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHCCCCCEEEE FERDEDNRHIWKLVFIASFSYPDEHSPNVAPELYFNFKRGWFYQPDIQGCELARPQVIDL ECCCCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEECCCCEEECCCCCCCCCCCCHHHHH FTSWALAFCRQLRNQHFDDISANEIRT HHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKRELLVHGKDLALPKSLHRHLEVVLDSFSLRADINRLSVNFRDISYYHRREGLHPVEMR CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHCCCCCEEEE FERDEDNRHIWKLVFIASFSYPDEHSPNVAPELYFNFKRGWFYQPDIQGCELARPQVIDL ECCCCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEECCCCEEECCCCCCCCCCCCHHHHH FTSWALAFCRQLRNQHFDDISANEIRT HHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA