| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713640
Identifier: 59713640
GI number: 59713640
Start: 525195
End: 525830
Strand: Reverse
Name: 59713640
Synonym: VF_A0457
Alternate gene names: NA
Gene position: 525830-525195 (Counterclockwise)
Preceding gene: 59713641
Following gene: 59713639
Centisome position: 39.53
GC content: 38.21
Gene sequence:
>636_bases ATGAGAATTCTTATGAAATCCTTTATCAAACCACTGTTACTGATCCTTTCTTCTGCTCTTTTCTTAACAGCGTGTAGCGA CAATAACGATCCAAAAGAAGGCGTACAATACGAAGTTTTATCAACATCATTAGAAAATGATGGCATGGCTCCAGTTACTG AAGTATTCGCTCTTTCTTGTGGTCATTGCCGTAATATGGAAAACTTTTTACCAGTAATCAGCCAAGAAGCTGGAACCGAC ATTGGTAAAATGCACATTACTTTTAACCAATCAGCACACATCGCATCAATGTTTTACTATGCTGCTGAAATGCAAGTAGA TGGCGCACCCGATCACGCATTCATGGAAGATTTATTCGCAGCAACCCAAATGGGCGAAGGTACAACATTAACAGAACAGC AAGAAGCTTACTCTAAAGCCTTCACTTCACGTGGCCTAGTAAGTCCATACGATTTCAATGAAGAGCAACGTGATACTTTA ATTAAGAAAGTAGATAACGCTAAAATGTTATCTGAAAAATCAGGTATTAGCTCTGTACCGACGTTTGTTGTTAATGGAAA ATACAACGTATTAATCGGTGGTCATGACGATCCTAAGCAAATCGCTGATACAATCCGTTACCTATTAGAAAAATAA
Upstream 100 bases:
>100_bases AAAATCTTTACACATATTTACCAAAATAGGACAACATTTGTTGTCCTATTTCATTTCTACTTTCTTCATTTCATGCTATT TTCATTCGAAATCATAAACT
Downstream 100 bases:
>100_bases TTGATTTAAATATAAGGAAATAATGTGTCTAAAATCATTATCACACTAGCTATAATCGTTTTAGGTTATATGCTGCTTCA ACATTTTGTGAATAACCCAA
Product: putative lipoprotein
Products: NA
Alternate protein names: Disulfide Oxidoreductase; Lipoprotein
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRILMKSFIKPLLLILSSALFLTACSDNNDPKEGVQYEVLSTSLENDGMAPVTEVFALSCGHCRNMENFLPVISQEAGTD IGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTL IKKVDNAKMLSEKSGISSVPTFVVNGKYNVLIGGHDDPKQIADTIRYLLEK
Sequences:
>Translated_211_residues MRILMKSFIKPLLLILSSALFLTACSDNNDPKEGVQYEVLSTSLENDGMAPVTEVFALSCGHCRNMENFLPVISQEAGTD IGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTL IKKVDNAKMLSEKSGISSVPTFVVNGKYNVLIGGHDDPKQIADTIRYLLEK >Mature_211_residues MRILMKSFIKPLLLILSSALFLTACSDNNDPKEGVQYEVLSTSLENDGMAPVTEVFALSCGHCRNMENFLPVISQEAGTD IGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTL IKKVDNAKMLSEKSGISSVPTFVVNGKYNVLIGGHDDPKQIADTIRYLLEK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23352; Mature: 23352
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILMKSFIKPLLLILSSALFLTACSDNNDPKEGVQYEVLSTSLENDGMAPVTEVFALSC CCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCEEHHHHHHHCCCCCCHHHHHHHHHC GHCRNMENFLPVISQEAGTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFA CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHEEECCCCCHHHHHHHHH ATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVP HHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCC TFVVNGKYNVLIGGHDDPKQIADTIRYLLEK EEEECCEEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRILMKSFIKPLLLILSSALFLTACSDNNDPKEGVQYEVLSTSLENDGMAPVTEVFALSC CCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCEEHHHHHHHCCCCCCHHHHHHHHHC GHCRNMENFLPVISQEAGTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFA CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHEEECCCCCHHHHHHHHH ATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVP HHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCC TFVVNGKYNVLIGGHDDPKQIADTIRYLLEK EEEECCEEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA