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The map label for this gene is yiaW [H]

Identifier: 59713563

GI number: 59713563

Start: 429385

End: 429765

Strand: Reverse

Name: yiaW [H]

Synonym: VF_A0380

Alternate gene names: 59713563

Gene position: 429765-429385 (Counterclockwise)

Preceding gene: 59713564

Following gene: 59713562

Centisome position: 32.31

GC content: 39.37

Gene sequence:

>381_bases
ATGTTTTTAGATTATTTTGCACTTGGTTTATTGGTCTTCGTTGCCCTTGTCATTTTCTATGGCATCATTGTCATTCATGA
TATTCCTTATGAGATAGCTCACAAACGCAACCACCCACATTCTGATGCAATTCATGTCGCTGGCTGGGTAAGTCTGTTTA
CTCTCCATGTTTTATGGCCATTTCTTTGGATCTGGGCAACGCTATGGCGTGAAGATCGTGGTTGGGGCTTCCATAAAATC
GAAAACAATCAATTAGAGCTACAAACTCGTGTTAATCATCTTAATGACCAAGTAGAGCTATTAACTGAAAAACTCTCTCA
AATAGAAGTCAATCAAGTTAAACAGGCGCCTCAAAAACCATCTCAAGAGGAGCAAGCATAA

Upstream 100 bases:

>100_bases
AAAAACTTATTAACCTTGCGTATTGTTCTTACAAATGCCAAACTCAAGTTATTAAAAAATATAGTTTTTGTTAACAATAA
AGGTAAACAAGGATACGTTT

Downstream 100 bases:

>100_bases
TGGATTTATTGCTTATTTTGACGTACACCGCGTTATGTATTGCGGTATTTAAAATCTTTAATATTCCACTAAACAAATGG
ACAGTGCCTACCGCAGGTTT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MFLDYFALGLLVFVALVIFYGIIVIHDIPYEIAHKRNHPHSDAIHVAGWVSLFTLHVLWPFLWIWATLWREDRGWGFHKI
ENNQLELQTRVNHLNDQVELLTEKLSQIEVNQVKQAPQKPSQEEQA

Sequences:

>Translated_126_residues
MFLDYFALGLLVFVALVIFYGIIVIHDIPYEIAHKRNHPHSDAIHVAGWVSLFTLHVLWPFLWIWATLWREDRGWGFHKI
ENNQLELQTRVNHLNDQVELLTEKLSQIEVNQVKQAPQKPSQEEQA
>Mature_126_residues
MFLDYFALGLLVFVALVIFYGIIVIHDIPYEIAHKRNHPHSDAIHVAGWVSLFTLHVLWPFLWIWATLWREDRGWGFHKI
ENNQLELQTRVNHLNDQVELLTEKLSQIEVNQVKQAPQKPSQEEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibI [H]

Homologues:

Organism=Escherichia coli, GI1790013, Length=98, Percent_Identity=70.4081632653061, Blast_Score=152, Evalue=5e-39,
Organism=Escherichia coli, GI1790025, Length=119, Percent_Identity=56.3025210084034, Blast_Score=143, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011223 [H]

Pfam domain/function: PF11742 DUF3302 [H]

EC number: NA

Molecular weight: Translated: 14849; Mature: 14849

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLDYFALGLLVFVALVIFYGIIVIHDIPYEIAHKRNHPHSDAIHVAGWVSLFTLHVLWP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FLWIWATLWREDRGWGFHKIENNQLELQTRVNHLNDQVELLTEKLSQIEVNQVKQAPQKP
HHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SQEEQA
CCCCCC
>Mature Secondary Structure
MFLDYFALGLLVFVALVIFYGIIVIHDIPYEIAHKRNHPHSDAIHVAGWVSLFTLHVLWP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FLWIWATLWREDRGWGFHKIENNQLELQTRVNHLNDQVELLTEKLSQIEVNQVKQAPQKP
HHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SQEEQA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]