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The map label for this gene is ebgC [H]

Identifier: 59713529

GI number: 59713529

Start: 384729

End: 385181

Strand: Reverse

Name: ebgC [H]

Synonym: VF_A0346

Alternate gene names: 59713529

Gene position: 385181-384729 (Counterclockwise)

Preceding gene: 59713530

Following gene: 59713528

Centisome position: 28.95

GC content: 38.41

Gene sequence:

>453_bases
ATGATCATTTTAGACAACTTAGAACAATTTAAAGTGGTATATCGCGACGGCCGTAAATGGAATCGTTGTGTAGAAGCAAT
TGAAAACATTGGCAATCTACGTGATGGAATAATGTATTCCATTGGCGATTCTCTGGTTTACATGATTGAAGATGGCATTG
CTAAAAATACAGAAACCTTTGTTGGTAACCGCCGATACTTTGATATCCATTACTACCTAGAAGGTCGTGAAACCGTTGAA
GTGGCGAGTAAATCTGAACTAGAAAGTGTGCAAGCGTATTCAGATGAAACCGACCGTGAGCATCTAAACGGTAATGGTCA
AAAACACCAGCTTTGTGAAGGTCAAGTAGCCGTATTTGATAACACCAAAGCCTATAAATTCCATGGTGATAATCGTGTTC
GTAAAGTGGTATTAAAAGTCACAATCGAAGATGGCTATTTCCTGAATAAGTAA

Upstream 100 bases:

>100_bases
TTCAACAAGGTGGCTGTTCACCAAAAGCATTGGCGAATCACACATTCATCTCAAACACAGCATTCACTTCAAAAACAACA
ATTGAAGGCGGAGAAAAGTA

Downstream 100 bases:

>100_bases
ACTAAGCAACACCGTAATAAAACAATAATAAAACGGTATCTGAAACTACATTCAGAGCCAAAAAATAAGGAGGGATTGGT
TCCAACCATGACCAAATCCC

Product: cryptic beta-D-galactosidase subunit beta

Products: Hydrolyzed b-D-galactosides [C]

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIILDNLEQFKVVYRDGRKWNRCVEAIENIGNLRDGIMYSIGDSLVYMIEDGIAKNTETFVGNRRYFDIHYYLEGRETVE
VASKSELESVQAYSDETDREHLNGNGQKHQLCEGQVAVFDNTKAYKFHGDNRVRKVVLKVTIEDGYFLNK

Sequences:

>Translated_150_residues
MIILDNLEQFKVVYRDGRKWNRCVEAIENIGNLRDGIMYSIGDSLVYMIEDGIAKNTETFVGNRRYFDIHYYLEGRETVE
VASKSELESVQAYSDETDREHLNGNGQKHQLCEGQVAVFDNTKAYKFHGDNRVRKVVLKVTIEDGYFLNK
>Mature_150_residues
MIILDNLEQFKVVYRDGRKWNRCVEAIENIGNLRDGIMYSIGDSLVYMIEDGIAKNTETFVGNRRYFDIHYYLEGRETVE
VASKSELESVQAYSDETDREHLNGNGQKHQLCEGQVAVFDNTKAYKFHGDNRVRKVVLKVTIEDGYFLNK

Specific function: Required for full activity of the ebgA enzyme. Exact function not known [H]

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789458, Length=150, Percent_Identity=54.6666666666667, Blast_Score=170, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17409; Mature: 17409

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILDNLEQFKVVYRDGRKWNRCVEAIENIGNLRDGIMYSIGDSLVYMIEDGIAKNTETF
CEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCEEEECCCEEEEEEECCCCCCCHHE
VGNRRYFDIHYYLEGRETVEVASKSELESVQAYSDETDREHLNGNGQKHQLCEGQVAVFD
ECCEEEEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEECCCCEEEEE
NTKAYKFHGDNRVRKVVLKVTIEDGYFLNK
CCEEEEEECCCCEEEEEEEEEECCCEEECC
>Mature Secondary Structure
MIILDNLEQFKVVYRDGRKWNRCVEAIENIGNLRDGIMYSIGDSLVYMIEDGIAKNTETF
CEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCEEEECCCEEEEEEECCCCCCCHHE
VGNRRYFDIHYYLEGRETVEVASKSELESVQAYSDETDREHLNGNGQKHQLCEGQVAVFD
ECCEEEEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEECCCCEEEEE
NTKAYKFHGDNRVRKVVLKVTIEDGYFLNK
CCEEEEEECCCCEEEEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: b-D-galactosides [C]

Specific reaction: Hydrolysis of terminal non-reducing b-D-galactose residues in b-D-galactosides [C]

General reaction: Hydrolase; Glycosylases; Glycosidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]