Click here to switch to the map view.

The map label for this gene is 59713470

Identifier: 59713470

GI number: 59713470

Start: 320009

End: 320548

Strand: Reverse

Name: 59713470

Synonym: VF_A0287

Alternate gene names: NA

Gene position: 320548-320009 (Counterclockwise)

Preceding gene: 59713471

Following gene: 59713469

Centisome position: 24.1

GC content: 37.96

Gene sequence:

>540_bases
ATGGCATCAACAAAATTCATCAAAAAAGCGTTCTTATTAGCAACAGCGCTATCTTCTTCGACAGCAATGGCAAATAACTT
TCCTTACAGCTTTTTTGAAGCACGAATTGGAACCAGCCCTGGTACTTATGGGGTTCAAGTTAACCAACAATTCACTGAAA
ACTCTCATTTGATAGCAAAAGCAGACACCAAATTTTCTGGTGATTGGGATATTAGCGGTGGTATTGGTTTTAACGGTCCA
GTTAACGAATTTTCTGATATTTATGGCCAATTATTACTACACAATGTGAAAGACAAAGGAAGTGATAAATTTGGCGATGA
AATGCTTACCGAGATTAATATCGGTTTCCGAGTGTGGTTAATGCAGCAAATTGAAGTAGGTGCACAATACGGTCAATTGT
TTGATAGTAATGACAGCAAGAATATTGGTAGTGTTCATTTCCGATTCCACTCAACAGAACAATTATCTGTGGGTGCAGAA
GCCAAATTTAATGGCGTATATGGCGGACAAATGATGATGACTGCTCGTTTCACATTCTAA

Upstream 100 bases:

>100_bases
GAATTCAGATACTATAAAACATACCCTCTCCTTATAAACTGGCCTGCTTTTTGCAGGCTTTTTTTATAGATAAAATTCAT
AAATATCAGGTTATAAGGTT

Downstream 100 bases:

>100_bases
CTCCCTCTTTAACGAACATAACCATCTATATAAGTCAGCAAAAAAACCGCTGACTTATATTCATCTAGTGAATAATAAAC
ATTTTCACTATTACTATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MASTKFIKKAFLLATALSSSTAMANNFPYSFFEARIGTSPGTYGVQVNQQFTENSHLIAKADTKFSGDWDISGGIGFNGP
VNEFSDIYGQLLLHNVKDKGSDKFGDEMLTEINIGFRVWLMQQIEVGAQYGQLFDSNDSKNIGSVHFRFHSTEQLSVGAE
AKFNGVYGGQMMMTARFTF

Sequences:

>Translated_179_residues
MASTKFIKKAFLLATALSSSTAMANNFPYSFFEARIGTSPGTYGVQVNQQFTENSHLIAKADTKFSGDWDISGGIGFNGP
VNEFSDIYGQLLLHNVKDKGSDKFGDEMLTEINIGFRVWLMQQIEVGAQYGQLFDSNDSKNIGSVHFRFHSTEQLSVGAE
AKFNGVYGGQMMMTARFTF
>Mature_178_residues
ASTKFIKKAFLLATALSSSTAMANNFPYSFFEARIGTSPGTYGVQVNQQFTENSHLIAKADTKFSGDWDISGGIGFNGPV
NEFSDIYGQLLLHNVKDKGSDKFGDEMLTEINIGFRVWLMQQIEVGAQYGQLFDSNDSKNIGSVHFRFHSTEQLSVGAEA
KFNGVYGGQMMMTARFTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19760; Mature: 19629

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTKFIKKAFLLATALSSSTAMANNFPYSFFEARIGTSPGTYGVQVNQQFTENSHLIAK
CCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHEECCCCCCEEEEEECCEECCCCEEEEE
ADTKFSGDWDISGGIGFNGPVNEFSDIYGQLLLHNVKDKGSDKFGDEMLTEINIGFRVWL
CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEE
MQQIEVGAQYGQLFDSNDSKNIGSVHFRFHSTEQLSVGAEAKFNGVYGGQMMMTARFTF
HHHHHHCHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCEEECCEECCEEEEEEEECC
>Mature Secondary Structure 
ASTKFIKKAFLLATALSSSTAMANNFPYSFFEARIGTSPGTYGVQVNQQFTENSHLIAK
CCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHEECCCCCCEEEEEECCEECCCCEEEEE
ADTKFSGDWDISGGIGFNGPVNEFSDIYGQLLLHNVKDKGSDKFGDEMLTEINIGFRVWL
CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEE
MQQIEVGAQYGQLFDSNDSKNIGSVHFRFHSTEQLSVGAEAKFNGVYGGQMMMTARFTF
HHHHHHCHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCEEECCEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA