| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713423
Identifier: 59713423
GI number: 59713423
Start: 266819
End: 267940
Strand: Reverse
Name: 59713423
Synonym: VF_A0240
Alternate gene names: NA
Gene position: 267940-266819 (Counterclockwise)
Preceding gene: 172087797
Following gene: 59713420
Centisome position: 20.14
GC content: 27.09
Gene sequence:
>1122_bases ATGTCTAATAAAATTAAATTTCATAATTTCACATTACTGATAAATGAAAAAAAGATCATCACAAAAAGTAATAAGGAAAT AAAGTTAAACTCAGTAGAACGAAATATTCTATCTTTACTGATACAAAATCCTACCGTTATCTTTAGTAAAGAAGAGATTC GTAACCATTCATGGTGTAAAGAAATTAAATGTCATTCATCAGTCGTTCCGCAAGCTATCTCCTTGCTGCGTAAGAAGTTA AGCATGCATGGCTTAGAACCAATCGAAACAGTAAAAGGTAAAGGGTACAAAGCTGCACATCTCGTTCAAGAGCAAGGTAT GGGAATGTACTCTGCTTTAGTTTTGTTTTTAAGCATGATATCTATACTAATATTAGAATACCCAGTTTCTAATTTAGGAA ATGAAAAACTGACATCGTTCAAATTCAAAAAAATAAATAATAATATAGTAACTACATCTGCATCAAATAAATTCGATACT AGCAATCTGAAATTAGAAGATGATGTTAAATATTTTATAAATAATCAAAATAATTTCATCTCAATTTCAGCATGCAAGCT TAAAAAAAATATATGTATTAACGTTTATAATGCCATTTATTTTAAAAAAGAATCAACACCGATTAAGATGGCAGATTTAA TATCTAATGTTAAATTTGATGATGATATGGATTTATTATTAGTGAAAAAAGATAAATTAACTTCGTTATCAGCAGAAATA CAATTAAGATCGTTAAATAACAAAAAATATAATGGGGAGTTATTTATAAACTTTGACTTAGAAAAAACAAACAACAATGA TTATTTTTCAAAAAAGACAACTTATATCAAAGAGTCTGGCTATTCTGGAGGGTTTGGCTATGCCTCAGTCAATAAAATAA CCCCAATAAAGAATAAAAATCATCATAAATATTTAATAAAAAAAATTGATGACGATAATCTGCTTTCACTACGATTTCAA TTTGGTATGGTAAAGAATAGTAAAATGACTTATGCATACAACCTGCTATCAGGCCCTAGAGAAAAACAATCTTATAGTTA TTCATACCCTATATCTAAAAACATAAGTTATTATTTTAATGATGAAATGAACATTTCATACATTGCTTATAAGCATACAT AA
Upstream 100 bases:
>100_bases TCTATATAATCAAATTAATCTAAAGATAATCCCTAATAATCATAGACATTTTAAATATCATATTTGAGAATCATAGGTCA TTTAGAATATAGGGATTACA
Downstream 100 bases:
>100_bases AAAAAGCAGCCAATCGTGGCTGCTTTCGTTTATATCACATTTTGAAGTTTTACTTTATGTCTATGGCTTAAATAACTTTC GATATATAACGCTATTTGTT
Product: SUA5 protein
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSNKIKFHNFTLLINEKKIITKSNKEIKLNSVERNILSLLIQNPTVIFSKEEIRNHSWCKEIKCHSSVVPQAISLLRKKL SMHGLEPIETVKGKGYKAAHLVQEQGMGMYSALVLFLSMISILILEYPVSNLGNEKLTSFKFKKINNNIVTTSASNKFDT SNLKLEDDVKYFINNQNNFISISACKLKKNICINVYNAIYFKKESTPIKMADLISNVKFDDDMDLLLVKKDKLTSLSAEI QLRSLNNKKYNGELFINFDLEKTNNNDYFSKKTTYIKESGYSGGFGYASVNKITPIKNKNHHKYLIKKIDDDNLLSLRFQ FGMVKNSKMTYAYNLLSGPREKQSYSYSYPISKNISYYFNDEMNISYIAYKHT
Sequences:
>Translated_373_residues MSNKIKFHNFTLLINEKKIITKSNKEIKLNSVERNILSLLIQNPTVIFSKEEIRNHSWCKEIKCHSSVVPQAISLLRKKL SMHGLEPIETVKGKGYKAAHLVQEQGMGMYSALVLFLSMISILILEYPVSNLGNEKLTSFKFKKINNNIVTTSASNKFDT SNLKLEDDVKYFINNQNNFISISACKLKKNICINVYNAIYFKKESTPIKMADLISNVKFDDDMDLLLVKKDKLTSLSAEI QLRSLNNKKYNGELFINFDLEKTNNNDYFSKKTTYIKESGYSGGFGYASVNKITPIKNKNHHKYLIKKIDDDNLLSLRFQ FGMVKNSKMTYAYNLLSGPREKQSYSYSYPISKNISYYFNDEMNISYIAYKHT >Mature_372_residues SNKIKFHNFTLLINEKKIITKSNKEIKLNSVERNILSLLIQNPTVIFSKEEIRNHSWCKEIKCHSSVVPQAISLLRKKLS MHGLEPIETVKGKGYKAAHLVQEQGMGMYSALVLFLSMISILILEYPVSNLGNEKLTSFKFKKINNNIVTTSASNKFDTS NLKLEDDVKYFINNQNNFISISACKLKKNICINVYNAIYFKKESTPIKMADLISNVKFDDDMDLLLVKKDKLTSLSAEIQ LRSLNNKKYNGELFINFDLEKTNNNDYFSKKTTYIKESGYSGGFGYASVNKITPIKNKNHHKYLIKKIDDDNLLSLRFQF GMVKNSKMTYAYNLLSGPREKQSYSYSYPISKNISYYFNDEMNISYIAYKHT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43020; Mature: 42889
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKIKFHNFTLLINEKKIITKSNKEIKLNSVERNILSLLIQNPTVIFSKEEIRNHSWCK CCCCEEEEEEEEEEECCEEEECCCCEEEEHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHH EIKCHSSVVPQAISLLRKKLSMHGLEPIETVKGKGYKAAHLVQEQGMGMYSALVLFLSMI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH SILILEYPVSNLGNEKLTSFKFKKINNNIVTTSASNKFDTSNLKLEDDVKYFINNQNNFI HHHHHHCCHHHCCCCHHHEEEEEECCCCEEEECCCCCCCCCCCEECCCEEEEECCCCCEE SISACKLKKNICINVYNAIYFKKESTPIKMADLISNVKFDDDMDLLLVKKDKLTSLSAEI EEEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEE QLRSLNNKKYNGELFINFDLEKTNNNDYFSKKTTYIKESGYSGGFGYASVNKITPIKNKN EEEECCCCEECCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC HHKYLIKKIDDDNLLSLRFQFGMVKNSKMTYAYNLLSGPREKQSYSYSYPISKNISYYFN CCEEEEEECCCCCEEEEEEEEEEEECCCEEEEEEECCCCCHHCCCEEECCCCCCCEEEEC DEMNISYIAYKHT CCCEEEEEEEECC >Mature Secondary Structure SNKIKFHNFTLLINEKKIITKSNKEIKLNSVERNILSLLIQNPTVIFSKEEIRNHSWCK CCCEEEEEEEEEEECCEEEECCCCEEEEHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHH EIKCHSSVVPQAISLLRKKLSMHGLEPIETVKGKGYKAAHLVQEQGMGMYSALVLFLSMI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH SILILEYPVSNLGNEKLTSFKFKKINNNIVTTSASNKFDTSNLKLEDDVKYFINNQNNFI HHHHHHCCHHHCCCCHHHEEEEEECCCCEEEECCCCCCCCCCCEECCCEEEEECCCCCEE SISACKLKKNICINVYNAIYFKKESTPIKMADLISNVKFDDDMDLLLVKKDKLTSLSAEI EEEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEE QLRSLNNKKYNGELFINFDLEKTNNNDYFSKKTTYIKESGYSGGFGYASVNKITPIKNKN EEEECCCCEECCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC HHKYLIKKIDDDNLLSLRFQFGMVKNSKMTYAYNLLSGPREKQSYSYSYPISKNISYYFN CCEEEEEECCCCCEEEEEEEEEEEECCCEEEEEEECCCCCHHCCCEEECCCCCCCEEEEC DEMNISYIAYKHT CCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA