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The map label for this gene is yhiR [H]

Identifier: 59713095

GI number: 59713095

Start: 2789210

End: 2790049

Strand: Direct

Name: yhiR [H]

Synonym: VF_2488

Alternate gene names: 59713095

Gene position: 2789210-2790049 (Clockwise)

Preceding gene: 59713093

Following gene: 59713096

Centisome position: 96.26

GC content: 43.33

Gene sequence:

>840_bases
ATGTTAAGTTACCGTCACAGTTTTCATGCAGGCAACCATGCCGATGTGGTTAAACACATTGTACAAAGCCTTATCCTTAA
TTCATTAACTCAAAAAGATAAGCCATTTGTTTATCATGACACCCACTCAGGTGTTGGCCGTTACGACTTAACGCATGAAT
GGTCTGAAAAAACAGGTGAATACAAACAAGGTATCGCACGTATCTGGGATCAAGCGAATCTTCCAGAAGAAATCACCAGC
TACCTTGATGCTATCAAAACCTTAAATGACGGCGAAGAGCTGCGTTACTACCCGGGTTCTCCTCGTGTTGGCCGTGCACA
CTTACGTCGCCAAGACCGTATGGTACTGACGGAACTTCACCCTTCAGATTACCCACTGCTTGAACAAGAGTTTCACCGTG
ACCGCCAAGTGTCTATCTATAAAGAAGACGGCTTTGCGCGACTAAAAGCAAGTCTTCCGCCAAAAGAGCGCAGAGGATTA
GTCTTAATCGACCCACCTTATGAGCTTGCAAAAGAATATCGCGATGTTGTTACTGCTATTGGCCAAAGTCATAAGCGTTG
GGCTACGGGTATTTATGCGATTTGGTATCCGGTAGTAAATCGTCACGATATCGACGATATGATCAACGGATTAAAAAAAT
TAGACATTCGTAACATTCTGCAAATTGAATTAGGTGTATCACCAGATACCAACGAGCGTGGCATGACAGCATCAGGCATG
ATCGTGATTAACCCACCTTGGAAGCTAGAAAGCCAAATGAATGATATTTTGCCTTTCTTAAAAGAAGCGATTGCACCTGC
AACAGGTCACTTCAAAGTAGAGTGGATTGTTCCAGAATAA

Upstream 100 bases:

>100_bases
GGTGCTTAATTGACTAAATTTCAATGGCTGATGCAAGAGTACACACATTGAGCCACAAACTTGGGTATAATATTCCCATT
CCAATAGTGAGAGTTCATCC

Downstream 100 bases:

>100_bases
AAAATAAGGGTTCAGGCCGGTCGCAAGCTCCCTCAAAGGATTCAGGAAAAGCAGATAGCATTGCTCAGTTTTATCTCTTT
CCTGAAACCTAGTAGACCTT

Product: DNA (exogenous) processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLSYRHSFHAGNHADVVKHIVQSLILNSLTQKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARIWDQANLPEEITS
YLDAIKTLNDGEELRYYPGSPRVGRAHLRRQDRMVLTELHPSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPKERRGL
VLIDPPYELAKEYRDVVTAIGQSHKRWATGIYAIWYPVVNRHDIDDMINGLKKLDIRNILQIELGVSPDTNERGMTASGM
IVINPPWKLESQMNDILPFLKEAIAPATGHFKVEWIVPE

Sequences:

>Translated_279_residues
MLSYRHSFHAGNHADVVKHIVQSLILNSLTQKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARIWDQANLPEEITS
YLDAIKTLNDGEELRYYPGSPRVGRAHLRRQDRMVLTELHPSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPKERRGL
VLIDPPYELAKEYRDVVTAIGQSHKRWATGIYAIWYPVVNRHDIDDMINGLKKLDIRNILQIELGVSPDTNERGMTASGM
IVINPPWKLESQMNDILPFLKEAIAPATGHFKVEWIVPE
>Mature_279_residues
MLSYRHSFHAGNHADVVKHIVQSLILNSLTQKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARIWDQANLPEEITS
YLDAIKTLNDGEELRYYPGSPRVGRAHLRRQDRMVLTELHPSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPKERRGL
VLIDPPYELAKEYRDVVTAIGQSHKRWATGIYAIWYPVVNRHDIDDMINGLKKLDIRNILQIELGVSPDTNERGMTASGM
IVINPPWKLESQMNDILPFLKEAIAPATGHFKVEWIVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=62.5, Blast_Score=369, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32201; Mature: 32201

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVVKHIVQSLILNSLTQKDKPFVYHDTHSGVGRYDLTHEWSEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCH
YKQGIARIWDQANLPEEITSYLDAIKTLNDGEELRYYPGSPRVGRAHLRRQDRMVLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCEEEEECC
PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPKERRGLVLIDPPYELAKEYRDVVTAI
CCCCCCHHHHHCCCCCEEEEECCCCEEEECCCCCHHHCCEEEECCCHHHHHHHHHHHHHH
GQSHKRWATGIYAIWYPVVNRHDIDDMINGLKKLDIRNILQIELGVSPDTNERGMTASGM
CCCCHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEECCE
IVINPPWKLESQMNDILPFLKEAIAPATGHFKVEWIVPE
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVVKHIVQSLILNSLTQKDKPFVYHDTHSGVGRYDLTHEWSEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCH
YKQGIARIWDQANLPEEITSYLDAIKTLNDGEELRYYPGSPRVGRAHLRRQDRMVLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCEEEEECC
PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPKERRGLVLIDPPYELAKEYRDVVTAI
CCCCCCHHHHHCCCCCEEEEECCCCEEEECCCCCHHHCCEEEECCCHHHHHHHHHHHHHH
GQSHKRWATGIYAIWYPVVNRHDIDDMINGLKKLDIRNILQIELGVSPDTNERGMTASGM
CCCCHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEECCE
IVINPPWKLESQMNDILPFLKEAIAPATGHFKVEWIVPE
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]