| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is envC [H]
Identifier: 59712958
GI number: 59712958
Start: 2638062
End: 2639207
Strand: Direct
Name: envC [H]
Synonym: VF_2351
Alternate gene names: 59712958
Gene position: 2638062-2639207 (Clockwise)
Preceding gene: 59712952
Following gene: 59712960
Centisome position: 91.05
GC content: 39.18
Gene sequence:
>1146_bases ATGAACATATCCCTTTTAAACAATTCTTTCTTTTGTCGTCGATTAGCTACGACAGCGTTAGTATGTCTGGCATTTTCTTC TCCAATCTTGGTTCACGCTAGTGATGCCGAATTAAAGGGAATGAAACAAGAAATATCTCGCCAAAATACCGTATTAAGCA AACAGAAAAAAGAACTCTCTAGCCTTCAAAACAGCCTTAAAAAGCATGAAGTTTCGATAGCAAACGCATCGAAAAAAATA CGTAATGCTGAACAAGAGTTAACGACATTAAAAAGCTCTATTAGCAGCCTTAAGCAGCAACAATCTGAATTGACCCAACA ACAGATTGGACAGACTGAGATATTAAAAGACCTATTAGTAAACTATTACTTAACCAGTCGAAATAACCAGTTATCAAATG TGCTTAGCGGTGATGATGTGACCAAAATGGATCGCATGACTCAATACGCTCAACGTATATCAGAAGCTCGTGTTGGTGCC ATCTCTCAATTAGAGTTCACCAATATGCAGCTTGAAGAAAAAGAAGCTGATTTGCTTGAAAAACAACAACGTCAAAGTGA ACTTCTCGCTCAATACAAAAAAGAGAAAGTAACACTTCAAACATCGCAAAATAAGCGTAAAAAGACCGTTTCAAGTATCA GAAAACGCATTACAAACGAAAGCAGCTATTTAAATGAATTGCAGCAAAATGAAAAACGTTTAAAAACAGCGATAGCTAAA GCAAAAGCGAAAAATAATGTACCAATGGACGGCATTGGCCGACAAAAAGGCCGTCTACCTTGGCCAATAAGCAATCCAAA AACATTACACAGCTTTGGTACCAAACAAACAGGTCAATTAACTTGGAAAGGTATGGTACTCGCTGGTGATTACGGAACGC CTGTAAAAGCAGTCTATTCAGGTAAAGTTGTTTTTGCCGATTGGCTACGTGGTTATGGCTTGATGGTATTAATCGATCAC GGTAAAGGTGATATGACGCTTTACGGCTACAACCAAAGCCTAATGAAGAAAGAAGGCGATAAAGTACGAGCAGGAGAAAC CATTGCGGTTGTGGGTGACAGTGGCGGTCAAGACAGACCTTCGCTTTACTTTGAGATCCGTCGTAACAGTAAAGCACAAA ACCCACGTTCTTGGTTAAGACGCTAA
Upstream 100 bases:
>100_bases CTCGCTAATACAAAGAAAATGCTGTGATATTGGTTTTACAATTGAGACCAAAGTTAAACTCTATCTAGTCAGAACCCACT CGATCTGAAATAATGCAGCG
Downstream 100 bases:
>100_bases CAATGAAATACTAAAAAGCCGCATAATGCGGCTTTTTTATTTAATTCGATAAATTAAGAAGACTATTTTAAGGTCTTATT CGGATCATCTTCTTTACGTT
Product: protease with a role in cell division
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNISLLNNSFFCRRLATTALVCLAFSSPILVHASDAELKGMKQEISRQNTVLSKQKKELSSLQNSLKKHEVSIANASKKI RNAEQELTTLKSSISSLKQQQSELTQQQIGQTEILKDLLVNYYLTSRNNQLSNVLSGDDVTKMDRMTQYAQRISEARVGA ISQLEFTNMQLEEKEADLLEKQQRQSELLAQYKKEKVTLQTSQNKRKKTVSSIRKRITNESSYLNELQQNEKRLKTAIAK AKAKNNVPMDGIGRQKGRLPWPISNPKTLHSFGTKQTGQLTWKGMVLAGDYGTPVKAVYSGKVVFADWLRGYGLMVLIDH GKGDMTLYGYNQSLMKKEGDKVRAGETIAVVGDSGGQDRPSLYFEIRRNSKAQNPRSWLRR
Sequences:
>Translated_381_residues MNISLLNNSFFCRRLATTALVCLAFSSPILVHASDAELKGMKQEISRQNTVLSKQKKELSSLQNSLKKHEVSIANASKKI RNAEQELTTLKSSISSLKQQQSELTQQQIGQTEILKDLLVNYYLTSRNNQLSNVLSGDDVTKMDRMTQYAQRISEARVGA ISQLEFTNMQLEEKEADLLEKQQRQSELLAQYKKEKVTLQTSQNKRKKTVSSIRKRITNESSYLNELQQNEKRLKTAIAK AKAKNNVPMDGIGRQKGRLPWPISNPKTLHSFGTKQTGQLTWKGMVLAGDYGTPVKAVYSGKVVFADWLRGYGLMVLIDH GKGDMTLYGYNQSLMKKEGDKVRAGETIAVVGDSGGQDRPSLYFEIRRNSKAQNPRSWLRR >Mature_381_residues MNISLLNNSFFCRRLATTALVCLAFSSPILVHASDAELKGMKQEISRQNTVLSKQKKELSSLQNSLKKHEVSIANASKKI RNAEQELTTLKSSISSLKQQQSELTQQQIGQTEILKDLLVNYYLTSRNNQLSNVLSGDDVTKMDRMTQYAQRISEARVGA ISQLEFTNMQLEEKEADLLEKQQRQSELLAQYKKEKVTLQTSQNKRKKTVSSIRKRITNESSYLNELQQNEKRLKTAIAK AKAKNNVPMDGIGRQKGRLPWPISNPKTLHSFGTKQTGQLTWKGMVLAGDYGTPVKAVYSGKVVFADWLRGYGLMVLIDH GKGDMTLYGYNQSLMKKEGDKVRAGETIAVVGDSGGQDRPSLYFEIRRNSKAQNPRSWLRR
Specific function: Unknown
COG id: COG4942
COG function: function code D; Membrane-bound metallopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0756 [H]
Homologues:
Organism=Escherichia coli, GI87082297, Length=410, Percent_Identity=34.6341463414634, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=35, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082174, Length=122, Percent_Identity=33.6065573770492, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87081989, Length=132, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR016047 - InterPro: IPR002886 [H]
Pfam domain/function: PF01551 Peptidase_M23 [H]
EC number: NA
Molecular weight: Translated: 43009; Mature: 43009
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISLLNNSFFCRRLATTALVCLAFSSPILVHASDAELKGMKQEISRQNTVLSKQKKELS CCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH SLQNSLKKHEVSIANASKKIRNAEQELTTLKSSISSLKQQQSELTQQQIGQTEILKDLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH NYYLTSRNNQLSNVLSGDDVTKMDRMTQYAQRISEARVGAISQLEFTNMQLEEKEADLLE HHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH KQQRQSELLAQYKKEKVTLQTSQNKRKKTVSSIRKRITNESSYLNELQQNEKRLKTAIAK HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AKAKNNVPMDGIGRQKGRLPWPISNPKTLHSFGTKQTGQLTWKGMVLAGDYGTPVKAVYS HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHC GKVVFADWLRGYGLMVLIDHGKGDMTLYGYNQSLMKKEGDKVRAGETIAVVGDSGGQDRP CCEEEHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEEECCCCCCCC SLYFEIRRNSKAQNPRSWLRR CEEEEEECCCCCCCHHHHHCC >Mature Secondary Structure MNISLLNNSFFCRRLATTALVCLAFSSPILVHASDAELKGMKQEISRQNTVLSKQKKELS CCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH SLQNSLKKHEVSIANASKKIRNAEQELTTLKSSISSLKQQQSELTQQQIGQTEILKDLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH NYYLTSRNNQLSNVLSGDDVTKMDRMTQYAQRISEARVGAISQLEFTNMQLEEKEADLLE HHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH KQQRQSELLAQYKKEKVTLQTSQNKRKKTVSSIRKRITNESSYLNELQQNEKRLKTAIAK HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AKAKNNVPMDGIGRQKGRLPWPISNPKTLHSFGTKQTGQLTWKGMVLAGDYGTPVKAVYS HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHC GKVVFADWLRGYGLMVLIDHGKGDMTLYGYNQSLMKKEGDKVRAGETIAVVGDSGGQDRP CCEEEHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEEECCCCCCCC SLYFEIRRNSKAQNPRSWLRR CEEEEEECCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]