| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is cpxA [H]
Identifier: 59712951
GI number: 59712951
Start: 2632691
End: 2634079
Strand: Direct
Name: cpxA [H]
Synonym: VF_2344
Alternate gene names: 59712951
Gene position: 2632691-2634079 (Clockwise)
Preceding gene: 59712950
Following gene: 59712952
Centisome position: 90.86
GC content: 39.52
Gene sequence:
>1389_bases GTGTTTAAGGTAAATACTCGCTTCCCCCTTTTATCCAGCTTATATGGCCGGATCTTTGCCATTTTTTGGTTAACCTTACT ATTGGTGCTTATTGGGGTTGTTATTGGCCCCAACTTTGACCCCCGTTCTCGTCACAATATTGCAGCTGAGCATCTAACTA AAATGACTCAAATTGCCGCTTACATTACAGGAAAGTACTCTGAGCGTGATAATTTGAAAAAAACATTGAAAGAGATCAGT CACCGAGCGCATAGACACGACGAAAATCTTGATCTATTTTTCACCACCCCAACGGGTGAAATTTTAGATAAACCAAGAGA ACTTCGAGGAAGAAAAAAAGCCTTACTTAACTTTTTAACGCTGTCTGATAATCCCGAATTACCACAACAAAAACTTTATG GAAGAACCATGATGGCTGGTCCTTTTGATATCGTGATTGCCCATGAAACCGTTTATATGTATGTGGGGCGATATTGGAAA AAGCCACCACCATTTATTCTTAGAATATTAGATAAACCAGGGCAATTACTCTTAGTTACCATGCTCGTTAGTACGCCCTT TTTACTTTGGCTTGCTTGGGCATTAAGTCAACCTGCAAGGCGTTTACAAAAGGCAGCAGAGCGCGTTGCTAAAGGCCAAT TTGAAAAAGATAAAGATCTTGAAAAAGGTCCAAGAGAGTTTAGAAAAACCGGACAAAGCTTTAATCAGATGGTTGGCTCA TTAAATACTATGATTTCGGGTCAACAACGTTTACTTTCAGATATTTCACATGAATTACGCTCCCCGCTAACCCGTTTAAG AATGGCAACTGCCCTTGCCACTCGTAAACAAGGGGAAAGTGCAGAATTATCTCGAATAGATATGGAAGCAGATCGTTTAG AACAAATGATATCTGAGTTATTGGAGCTTTCTCGCATTCAAGTTAATAGTCATCAAGAGCGAGAAAAAACCGATGCTTAT TCATTATGGTTTGATATTTTAGAAGACGCCAAATTTGAAGCCGAGCATTTAAATAAAGTACTGACTTACTCTGATTTAAA AGAAACGCCTATTTTTGGGAACCCGAATTTATTAATGAGCGCAGTAGAAAACGTAATACGTAATGCCATTAAATACGGTA ACGATGTAGTCACGGTGAACATTAATGACACAGGTAAAACTCTCACCATCATCGTTGATGATAATGGCGAAGGTGTCCCT GAAGATGAACTACAAGATATCTTTAAACCTTTCTACCGTGTCTCTACCGCTCGTGATCGAAGCAGTGGCGGAACTGGGCT TGGTTTAGCGATTACTGAAAGTGCCATTTATCAACACAATGGGACAATTATTGCGAGCCGAAGTCCATTAGGTGGATTAC GAATGACAATAACACTGCCAATAGAATAA
Upstream 100 bases:
>100_bases CGTGTCTAATTTACGCAAAAAATTACCGCCACTATCAGAAGGAAAACCTCGAATTAAAACATTACGAGGCCGCGGCTATT TGTTTGTAGAGGAGTAATCG
Downstream 100 bases:
>100_bases ATTCTTCAAAACCTAACACTCGTGGCTTATATCAAACAAAACGAATCTCGATATAAGTCATGTGTTATTTGGATGAGTTT AGATATACTGCTTTTAATTT
Product: two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MFKVNTRFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRSRHNIAAEHLTKMTQIAAYITGKYSERDNLKKTLKEIS HRAHRHDENLDLFFTTPTGEILDKPRELRGRKKALLNFLTLSDNPELPQQKLYGRTMMAGPFDIVIAHETVYMYVGRYWK KPPPFILRILDKPGQLLLVTMLVSTPFLLWLAWALSQPARRLQKAAERVAKGQFEKDKDLEKGPREFRKTGQSFNQMVGS LNTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESAELSRIDMEADRLEQMISELLELSRIQVNSHQEREKTDAY SLWFDILEDAKFEAEHLNKVLTYSDLKETPIFGNPNLLMSAVENVIRNAIKYGNDVVTVNINDTGKTLTIIVDDNGEGVP EDELQDIFKPFYRVSTARDRSSGGTGLGLAITESAIYQHNGTIIASRSPLGGLRMTITLPIE
Sequences:
>Translated_462_residues MFKVNTRFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRSRHNIAAEHLTKMTQIAAYITGKYSERDNLKKTLKEIS HRAHRHDENLDLFFTTPTGEILDKPRELRGRKKALLNFLTLSDNPELPQQKLYGRTMMAGPFDIVIAHETVYMYVGRYWK KPPPFILRILDKPGQLLLVTMLVSTPFLLWLAWALSQPARRLQKAAERVAKGQFEKDKDLEKGPREFRKTGQSFNQMVGS LNTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESAELSRIDMEADRLEQMISELLELSRIQVNSHQEREKTDAY SLWFDILEDAKFEAEHLNKVLTYSDLKETPIFGNPNLLMSAVENVIRNAIKYGNDVVTVNINDTGKTLTIIVDDNGEGVP EDELQDIFKPFYRVSTARDRSSGGTGLGLAITESAIYQHNGTIIASRSPLGGLRMTITLPIE >Mature_462_residues MFKVNTRFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRSRHNIAAEHLTKMTQIAAYITGKYSERDNLKKTLKEIS HRAHRHDENLDLFFTTPTGEILDKPRELRGRKKALLNFLTLSDNPELPQQKLYGRTMMAGPFDIVIAHETVYMYVGRYWK KPPPFILRILDKPGQLLLVTMLVSTPFLLWLAWALSQPARRLQKAAERVAKGQFEKDKDLEKGPREFRKTGQSFNQMVGS LNTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESAELSRIDMEADRLEQMISELLELSRIQVNSHQEREKTDAY SLWFDILEDAKFEAEHLNKVLTYSDLKETPIFGNPNLLMSAVENVIRNAIKYGNDVVTVNINDTGKTLTIIVDDNGEGVP EDELQDIFKPFYRVSTARDRSSGGTGLGLAITESAIYQHNGTIIASRSPLGGLRMTITLPIE
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=459, Percent_Identity=43.5729847494553, Blast_Score=310, Evalue=1e-85, Organism=Escherichia coli, GI1787894, Length=308, Percent_Identity=29.5454545454545, Blast_Score=138, Evalue=6e-34, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=30.5755395683453, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1786783, Length=305, Percent_Identity=26.8852459016393, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1789808, Length=266, Percent_Identity=27.4436090225564, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI87082128, Length=276, Percent_Identity=28.2608695652174, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=26.5217391304348, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=30.2752293577982, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=27.3469387755102, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1787374, Length=300, Percent_Identity=27, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789403, Length=321, Percent_Identity=28.3489096573209, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=29.2792792792793, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790861, Length=299, Percent_Identity=24.4147157190635, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788549, Length=219, Percent_Identity=26.027397260274, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789149, Length=223, Percent_Identity=27.3542600896861, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1788713, Length=235, Percent_Identity=23.8297872340426, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI48994928, Length=223, Percent_Identity=26.457399103139, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790551, Length=291, Percent_Identity=22.680412371134, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52469; Mature: 52469
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKVNTRFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRSRHNIAAEHLTKMTQIAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YITGKYSERDNLKKTLKEISHRAHRHDENLDLFFTTPTGEILDKPRELRGRKKALLNFLT HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHC LSDNPELPQQKLYGRTMMAGPFDIVIAHETVYMYVGRYWKKPPPFILRILDKPGQLLLVT CCCCCCCCHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHEECCCCHHHHHH MLVSTPFLLWLAWALSQPARRLQKAAERVAKGQFEKDKDLEKGPREFRKTGQSFNQMVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHH LNTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESAELSRIDMEADRLEQMISEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHH LELSRIQVNSHQEREKTDAYSLWFDILEDAKFEAEHLNKVLTYSDLKETPIFGNPNLLMS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH AVENVIRNAIKYGNDVVTVNINDTGKTLTIIVDDNGEGVPEDELQDIFKPFYRVSTARDR HHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC SSGGTGLGLAITESAIYQHNGTIIASRSPLGGLRMTITLPIE CCCCCCEEHEEEHHHHEECCCEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MFKVNTRFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRSRHNIAAEHLTKMTQIAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YITGKYSERDNLKKTLKEISHRAHRHDENLDLFFTTPTGEILDKPRELRGRKKALLNFLT HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHC LSDNPELPQQKLYGRTMMAGPFDIVIAHETVYMYVGRYWKKPPPFILRILDKPGQLLLVT CCCCCCCCHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHEECCCCHHHHHH MLVSTPFLLWLAWALSQPARRLQKAAERVAKGQFEKDKDLEKGPREFRKTGQSFNQMVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHH LNTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESAELSRIDMEADRLEQMISEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHH LELSRIQVNSHQEREKTDAYSLWFDILEDAKFEAEHLNKVLTYSDLKETPIFGNPNLLMS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH AVENVIRNAIKYGNDVVTVNINDTGKTLTIIVDDNGEGVPEDELQDIFKPFYRVSTARDR HHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC SSGGTGLGLAITESAIYQHNGTIIASRSPLGGLRMTITLPIE CCCCCCEEHEEEHHHHEECCCEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]