| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is yjeE [H]
Identifier: 59712934
GI number: 59712934
Start: 2615420
End: 2615884
Strand: Reverse
Name: yjeE [H]
Synonym: VF_2327
Alternate gene names: 59712934
Gene position: 2615884-2615420 (Counterclockwise)
Preceding gene: 59712936
Following gene: 59712933
Centisome position: 90.28
GC content: 39.35
Gene sequence:
>465_bases ATGGAACGCTTTGAATTTAATTTAGCTACCGAAGACGATACGGTTGAATTTGGTAGACAGCTTTCTCAAGCTTGTACTCA ACAAACAACAATTTTCCTACATGGTGACCTTGGTGCTGGCAAAACGACGTTTAGCCGAGGTTTCATTCGTTCATTAGGTC ATACTGGTAATGTAAAAAGCCCAACTTATACATTAGTTGAACCATATGAACTTGATCAATGGCAGGTATATCATTTCGAT CTATATCGTTTGGCTGACCCAGAAGAACTTGAGTTTATGGGGATCCGTGATTATTTTACTGATGATGCAATTTGTTTAGT TGAGTGGCCTGAGAAAGGGGAAGGGTTATTACCAGCACCAGATCTTGATATTGATATTCGCTACGATGGTGAAGCTCGTC ATGTTGTGATCACAGGTAATAATGAGTATGGATGTAGTTTAGTACAGCGGTTGGATTTGTGTTAA
Upstream 100 bases:
>100_bases CCAATAAGATTACTTGTGTATAAACATTCATCACATTAAATTGTGAATTTGATACCAAGTCCATCAATTTAGACAATTAA AATAGTGAAATTAGTGAATA
Downstream 100 bases:
>100_bases TCGGTAAATATTTTCGAATTATTTGGTATACGCTATTTGTTGTTCTTTCAACAAGTAGCTTTTTTGTATCTGCAAACACG TTAGAGGGAATACGAGTTTG
Product: ATPase with strong ADP affinity
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKSPTYTLVEPYELDQWQVYHFD LYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAPDLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC
Sequences:
>Translated_154_residues MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKSPTYTLVEPYELDQWQVYHFD LYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAPDLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC >Mature_154_residues MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKSPTYTLVEPYELDQWQVYHFD LYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAPDLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=144, Percent_Identity=61.8055555555556, Blast_Score=193, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17623; Mature: 17623
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKS CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC PTYTLVEPYELDQWQVYHFDLYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAP CEEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC CCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCC >Mature Secondary Structure MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKS CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC PTYTLVEPYELDQWQVYHFDLYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAP CEEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC CCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]