Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is yjeE [H]

Identifier: 59712934

GI number: 59712934

Start: 2615420

End: 2615884

Strand: Reverse

Name: yjeE [H]

Synonym: VF_2327

Alternate gene names: 59712934

Gene position: 2615884-2615420 (Counterclockwise)

Preceding gene: 59712936

Following gene: 59712933

Centisome position: 90.28

GC content: 39.35

Gene sequence:

>465_bases
ATGGAACGCTTTGAATTTAATTTAGCTACCGAAGACGATACGGTTGAATTTGGTAGACAGCTTTCTCAAGCTTGTACTCA
ACAAACAACAATTTTCCTACATGGTGACCTTGGTGCTGGCAAAACGACGTTTAGCCGAGGTTTCATTCGTTCATTAGGTC
ATACTGGTAATGTAAAAAGCCCAACTTATACATTAGTTGAACCATATGAACTTGATCAATGGCAGGTATATCATTTCGAT
CTATATCGTTTGGCTGACCCAGAAGAACTTGAGTTTATGGGGATCCGTGATTATTTTACTGATGATGCAATTTGTTTAGT
TGAGTGGCCTGAGAAAGGGGAAGGGTTATTACCAGCACCAGATCTTGATATTGATATTCGCTACGATGGTGAAGCTCGTC
ATGTTGTGATCACAGGTAATAATGAGTATGGATGTAGTTTAGTACAGCGGTTGGATTTGTGTTAA

Upstream 100 bases:

>100_bases
CCAATAAGATTACTTGTGTATAAACATTCATCACATTAAATTGTGAATTTGATACCAAGTCCATCAATTTAGACAATTAA
AATAGTGAAATTAGTGAATA

Downstream 100 bases:

>100_bases
TCGGTAAATATTTTCGAATTATTTGGTATACGCTATTTGTTGTTCTTTCAACAAGTAGCTTTTTTGTATCTGCAAACACG
TTAGAGGGAATACGAGTTTG

Product: ATPase with strong ADP affinity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKSPTYTLVEPYELDQWQVYHFD
LYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAPDLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC

Sequences:

>Translated_154_residues
MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKSPTYTLVEPYELDQWQVYHFD
LYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAPDLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC
>Mature_154_residues
MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKSPTYTLVEPYELDQWQVYHFD
LYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAPDLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=144, Percent_Identity=61.8055555555556, Blast_Score=193, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17623; Mature: 17623

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKS
CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
PTYTLVEPYELDQWQVYHFDLYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAP
CEEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC
DLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC
CCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCC
>Mature Secondary Structure
MERFEFNLATEDDTVEFGRQLSQACTQQTTIFLHGDLGAGKTTFSRGFIRSLGHTGNVKS
CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
PTYTLVEPYELDQWQVYHFDLYRLADPEELEFMGIRDYFTDDAICLVEWPEKGEGLLPAP
CEEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC
DLDIDIRYDGEARHVVITGNNEYGCSLVQRLDLC
CCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]